KEGG   Leptidea sinapis (Wood White): 126965680
Entry
126965680         CDS       T09272                                 
Name
(RefSeq) probable nucleoporin Nup54
  KO
K14308  nuclear pore complex protein Nup54
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126965680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsin03019]
    126965680
Messenger RNA biogenesis [BR:lsin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     126965680
SSDB
Motif
Pfam: Nup54 Nup54_C PCDH15_12th
Other DBs
NCBI-GeneID: 126965680
NCBI-ProteinID: XP_050665364
LinkDB
Position
8:complement(15108749..15137673)
AA seq 568 aa
MSFSFGSATTSQSNPFGGTTKPAFSFGGTNTATTSTAGFGGFGTSTTSSGFGTLGSTSTA
PFGSLGSTPATTAPSLFGGTGFGSAAAKPTTGFGAGFGTSTFGTGTGFGANTSFSAPQQQ
STFGTNTFGTTSAFGTGSTFGNSFGKPATTGFGGFGTGLGATPAFGQQQKQQPQQQQQQA
PGPSNAHEALVAAVFNCAVFGDERDQVLAKWNLLQAQWGNGQAYYSRNAPALELNEQNPL
CRFKAVGYSRICGKDDADGHVAMIFNKPEQEIKNNQQGFISSLSGLLGNKPNLAVNIETV
EALSEKKCQVVVYVVDKNNNMNINASELSTFLNNGSPRSTLNSAGCGHVAPVTKPTSHML
QQYLNSPPPGMDLRLWKQAQADNPDPENYIPVPMIGFTELKFRAQRQSEQASLQASYLRQ
AAHTLSELRVRRASSVASLANLAARFHSMRHSLLTIIARREVVGRVGVTLSPEEEALRLR
LQELGSQLSSPPLYNGRLNELLCAVRLQRSASAGVPSERYQLDPGAQEDVKQFLSLQQRG
MAHLMETARQDLATLNTIAEGMSKLIQT
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgtcattctcatttgggtctgcaacgacttcacaaagcaatccctttggaggcacaaca
aaaccggcattttcttttggaggcacaaatactgctacaactagtacagccggattcgga
ggtttcggtacgagtacaacatcttcaggatttggaacacttggttcaactagcactgca
ccatttggaagcctgggatcaacacctgctacaacagcaccatctctgtttggagggact
ggtttcgggagtgctgcagctaaaccaactacagggtttggtgcaggattcggcacaagt
acctttggcactggcacaggatttggtgcaaatacatcattcagtgcaccacagcaacaa
tcaacgtttgggacaaatacatttggtaccacttcagcctttggtactggatctacattt
ggcaattcatttgggaaacctgctacaacagggtttggaggtttcggaacagggcttgga
gcgacaccagcttttggccagcaacagaaacaacagccacagcagcaacaacaacaggcc
ccggggccttcgaatgcccacgaagctctagtcgcagctgtattcaattgtgctgtgttt
ggcgacgaaagggaccaggtccttgccaagtggaacttattgcaagcgcagtggggtaat
ggtcaagcatactacagccgaaatgcaccagctcttgaattaaatgaacaaaatccgtta
tgccgcttcaaagctgtgggctactcccgaatttgtggtaaagatgatgctgatggacac
gtcgccatgatcttcaacaaaccggaacaggaaataaaaaataaccagcagggattcatt
tcatcattatcaggccttcttgggaacaaacctaatcttgctgttaatatagaaactgtt
gaagcactatcagaaaagaagtgtcaggtcgtagtgtacgtggttgataagaataacaac
atgaatattaatgcgtcggaactgagcacgttcctgaacaacggcagcccgcggagcacg
ttgaacagcgcggggtgcggccacgtggcacccgtgaccaagcccacgagccacatgctg
cagcagtacctgaactcaccacccccaggtatggacctgcgactctggaagcaagcacag
gctgacaacccagacccggagaattacattcctgtgccaatgattggattcacagagctc
aagttccgcgcccagcgccagtcggagcaggcgtcgctgcaggccagctacctgcgccag
gcggcccacaccctgagcgagctgcgcgtgcgtcgcgcctcgtcggtggcctcgctcgcc
aacctggccgccaggttccactcgatgcgccactcgctgttgacgataatagcgcgacgg
gaggtggtcggccgtgtgggagtgaccctcagcccggaggaggaggcactgcgcctgagg
ctgcaggagctgggctctcaactgtcgtcgccgccgctctacaacggtcgtctgaacgag
ttgttatgtgcggttcgtcttcagcgcagcgcgagtgccggcgttccaagcgaacgctac
cagttggatccaggtgctcaagaagacgtgaagcagttcctatcactgcagcagcgcggc
atggcacacctgatggagactgcacgccaagacttggcaacactgaacacgatagcggaa
ggaatgtccaaattgattcagacataa

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