Leptidea sinapis (Wood White): 126965680
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Entry
126965680 CDS
T09272
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126965680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126965680
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126965680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
126965680
NCBI-ProteinID:
XP_050665364
LinkDB
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Position
8:complement(15108749..15137673)
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AA seq
568 aa
AA seq
DB search
MSFSFGSATTSQSNPFGGTTKPAFSFGGTNTATTSTAGFGGFGTSTTSSGFGTLGSTSTA
PFGSLGSTPATTAPSLFGGTGFGSAAAKPTTGFGAGFGTSTFGTGTGFGANTSFSAPQQQ
STFGTNTFGTTSAFGTGSTFGNSFGKPATTGFGGFGTGLGATPAFGQQQKQQPQQQQQQA
PGPSNAHEALVAAVFNCAVFGDERDQVLAKWNLLQAQWGNGQAYYSRNAPALELNEQNPL
CRFKAVGYSRICGKDDADGHVAMIFNKPEQEIKNNQQGFISSLSGLLGNKPNLAVNIETV
EALSEKKCQVVVYVVDKNNNMNINASELSTFLNNGSPRSTLNSAGCGHVAPVTKPTSHML
QQYLNSPPPGMDLRLWKQAQADNPDPENYIPVPMIGFTELKFRAQRQSEQASLQASYLRQ
AAHTLSELRVRRASSVASLANLAARFHSMRHSLLTIIARREVVGRVGVTLSPEEEALRLR
LQELGSQLSSPPLYNGRLNELLCAVRLQRSASAGVPSERYQLDPGAQEDVKQFLSLQQRG
MAHLMETARQDLATLNTIAEGMSKLIQT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctcatttgggtctgcaacgacttcacaaagcaatccctttggaggcacaaca
aaaccggcattttcttttggaggcacaaatactgctacaactagtacagccggattcgga
ggtttcggtacgagtacaacatcttcaggatttggaacacttggttcaactagcactgca
ccatttggaagcctgggatcaacacctgctacaacagcaccatctctgtttggagggact
ggtttcgggagtgctgcagctaaaccaactacagggtttggtgcaggattcggcacaagt
acctttggcactggcacaggatttggtgcaaatacatcattcagtgcaccacagcaacaa
tcaacgtttgggacaaatacatttggtaccacttcagcctttggtactggatctacattt
ggcaattcatttgggaaacctgctacaacagggtttggaggtttcggaacagggcttgga
gcgacaccagcttttggccagcaacagaaacaacagccacagcagcaacaacaacaggcc
ccggggccttcgaatgcccacgaagctctagtcgcagctgtattcaattgtgctgtgttt
ggcgacgaaagggaccaggtccttgccaagtggaacttattgcaagcgcagtggggtaat
ggtcaagcatactacagccgaaatgcaccagctcttgaattaaatgaacaaaatccgtta
tgccgcttcaaagctgtgggctactcccgaatttgtggtaaagatgatgctgatggacac
gtcgccatgatcttcaacaaaccggaacaggaaataaaaaataaccagcagggattcatt
tcatcattatcaggccttcttgggaacaaacctaatcttgctgttaatatagaaactgtt
gaagcactatcagaaaagaagtgtcaggtcgtagtgtacgtggttgataagaataacaac
atgaatattaatgcgtcggaactgagcacgttcctgaacaacggcagcccgcggagcacg
ttgaacagcgcggggtgcggccacgtggcacccgtgaccaagcccacgagccacatgctg
cagcagtacctgaactcaccacccccaggtatggacctgcgactctggaagcaagcacag
gctgacaacccagacccggagaattacattcctgtgccaatgattggattcacagagctc
aagttccgcgcccagcgccagtcggagcaggcgtcgctgcaggccagctacctgcgccag
gcggcccacaccctgagcgagctgcgcgtgcgtcgcgcctcgtcggtggcctcgctcgcc
aacctggccgccaggttccactcgatgcgccactcgctgttgacgataatagcgcgacgg
gaggtggtcggccgtgtgggagtgaccctcagcccggaggaggaggcactgcgcctgagg
ctgcaggagctgggctctcaactgtcgtcgccgccgctctacaacggtcgtctgaacgag
ttgttatgtgcggttcgtcttcagcgcagcgcgagtgccggcgttccaagcgaacgctac
cagttggatccaggtgctcaagaagacgtgaagcagttcctatcactgcagcagcgcggc
atggcacacctgatggagactgcacgccaagacttggcaacactgaacacgatagcggaa
ggaatgtccaaattgattcagacataa
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