KEGG   Leptidea sinapis (Wood White): 126965681
Entry
126965681         CDS       T09272                                 
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin04136  Autophagy - other
lsin04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    126965681
   04136 Autophagy - other
    126965681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsin04131]
    126965681
   03029 Mitochondrial biogenesis [BR:lsin03029]
    126965681
Membrane trafficking [BR:lsin04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    126965681
 Others
  Specific organelles associated proteins
   Auto phagosome
    126965681
Mitochondrial biogenesis [BR:lsin03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    126965681
SSDB
Motif
Pfam: ATG16 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR19_1st eIF2A Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Crescentin WD40_RFWD3 KASH_CCD CCDC93_CC DUF6212 NET2A YkyA HisKA_3 HOOK
Other DBs
NCBI-GeneID: 126965681
NCBI-ProteinID: XP_050665365
LinkDB
Position
8:complement(10308905..10531738)
AA seq 538 aa
MEGGKWRNSIISQLQLRNKRETAAFQDIISFQSRLFDNVNTLKNENLQLTLVNERIRYSN
TESISSAGGAGNEKIQALEQKILNQQEELTNLHRRRGECSQQIINLNAQVNELEKSLKAK
DVIISENTALIASLRAEIQLYETNMTELHGLNQVLRDEHQALQIAFAAIEEKLRKAQDEN
RSLVERLIKYKSKDADKMNEENEHFIKSSNPTAFLINTFGRVSFGKKSDKVKKELEEAAR
EGGSRSSIGSGGSADDKISDAMPYYSTTLPTTVALRFDAHDGEVNAVKWSPTDRIVATSG
ADRKVKLWNVSKLTAESRGTLVGSNAGVMSVDFDSTGAYLVGASNDFASRVWTVGDQRLR
HTLTGHSGKVMAAKFLGEPTKVITGSHDRTLKIWDLRSRMCTETKFAGSSCNDLVTSDGA
GSTIISGHFDKRIRFWDIRTEMSANHIVLQGKVTSLDLSRDSNYLLACVRDDTVQLIDLR
MNSIVRSFSHESFKVGCDWSRAAFGPGGRLLAVGSAEGAAYVWNTHTGKLEAILKDHS
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggaaggtggtaaatggaggaatagtatcataagccaactacaacttcgaaacaaaaga
gaaacagctgcattccaagatattatttcctttcaaagcagactttttgataatgtcaat
actctaaagaatgagaatttacagctgactttggttaatgagcgtataagatattcgaac
acagaaagtatatcatctgctggaggagctggcaatgagaaaattcaggctttagaacag
aagatacttaaccaacaagaagaattaacaaatttacatagaaggagaggagaatgctcc
caacaaattataaacctaaatgctcaagttaatgaattggagaaaagtttaaaagcaaag
gatgtaataatttcagagaacactgctttaatagcatcacttagagccgaaattcaattg
tatgagacgaatatgacagaattacacggactaaatcaagtcttgagagatgagcaccag
gcactacaaattgcctttgcagctatcgaagagaagcttaggaaagcacaggacgaaaat
cgatctttggtggagcggctgataaaatataaatcgaaagatgcggataaaatgaatgaa
gaaaatgaacattttatcaagtcaagcaaccctaccgcgtttttgatcaacacgtttggt
agagttagtttcgggaaaaagagtgataaagtaaagaaggagttggaggaggcggcacgg
gagggtggtagtagaagtagtatcggctccggtgggagtgccgatgataagatatctgat
gcgatgccgtactatagcaccacgctgcccactaccgtagcgcttagatttgatgcacat
gatggcgaagttaatgcagtaaagtggagcccgaccgacaggatagtggccacgagcgga
gctgacaggaaggttaaattatggaacgtgtctaagttaacggcggagagccgcggcacg
cttgtcgggtcgaacgcgggcgttatgtccgtggacttcgactctaccggcgcgtacctc
gtgggagcctccaacgacttcgcgagccgggtgtggaccgtgggcgaccagaggctgagg
cacacgcttacgggccacagtgggaaggtgatggcagctaaattcctcggagaacctaca
aaagtgataactgggagccacgaccgaacacttaaaatatgggatcttaggagtcgaatg
tgtacggaaactaaatttgcaggatcatcttgcaatgaccttgttacatcagacggcgcg
gggtcaacaatcatctcgggacattttgacaagcgaataagattttgggacatacggaca
gaaatgtcggccaatcacatcgtgctccagggcaaggtcacctcgcttgacctcagtaga
gatagcaactatttgttggcctgcgtcagagacgacacggtacagttgatagacttgcgg
atgaactccatcgtacgttcatttagtcatgaatcgttcaaagtggggtgtgactggtcg
cgggcggcgttcgggccgggtgggcgactgctggccgtgggctcggccgagggcgccgcc
tacgtgtggaacacgcacacggggaagctggaggcgatcctcaaggaccactcgtaa

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