Leptidea sinapis (Wood White): 126965681
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Entry
126965681 CDS
T09272
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04136
Autophagy - other
lsin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126965681
04136 Autophagy - other
126965681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126965681
03029 Mitochondrial biogenesis [BR:
lsin03029
]
126965681
Membrane trafficking [BR:
lsin04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
126965681
Others
Rab GTPases of specific organelles
Auto phagosome
126965681
Mitochondrial biogenesis [BR:
lsin03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126965681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Crescentin
KASH_CCD
CCDC93_CC
DUF6212
HisKA_3
HOOK
YkyA
Motif
Other DBs
NCBI-GeneID:
126965681
NCBI-ProteinID:
XP_050665365
EnsemblRapid:
ENSLSNG00005009554
LinkDB
All DBs
Position
8:complement(10308905..10531738)
Genome browser
AA seq
538 aa
AA seq
DB search
MEGGKWRNSIISQLQLRNKRETAAFQDIISFQSRLFDNVNTLKNENLQLTLVNERIRYSN
TESISSAGGAGNEKIQALEQKILNQQEELTNLHRRRGECSQQIINLNAQVNELEKSLKAK
DVIISENTALIASLRAEIQLYETNMTELHGLNQVLRDEHQALQIAFAAIEEKLRKAQDEN
RSLVERLIKYKSKDADKMNEENEHFIKSSNPTAFLINTFGRVSFGKKSDKVKKELEEAAR
EGGSRSSIGSGGSADDKISDAMPYYSTTLPTTVALRFDAHDGEVNAVKWSPTDRIVATSG
ADRKVKLWNVSKLTAESRGTLVGSNAGVMSVDFDSTGAYLVGASNDFASRVWTVGDQRLR
HTLTGHSGKVMAAKFLGEPTKVITGSHDRTLKIWDLRSRMCTETKFAGSSCNDLVTSDGA
GSTIISGHFDKRIRFWDIRTEMSANHIVLQGKVTSLDLSRDSNYLLACVRDDTVQLIDLR
MNSIVRSFSHESFKVGCDWSRAAFGPGGRLLAVGSAEGAAYVWNTHTGKLEAILKDHS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggtaaatggaggaatagtatcataagccaactacaacttcgaaacaaaaga
gaaacagctgcattccaagatattatttcctttcaaagcagactttttgataatgtcaat
actctaaagaatgagaatttacagctgactttggttaatgagcgtataagatattcgaac
acagaaagtatatcatctgctggaggagctggcaatgagaaaattcaggctttagaacag
aagatacttaaccaacaagaagaattaacaaatttacatagaaggagaggagaatgctcc
caacaaattataaacctaaatgctcaagttaatgaattggagaaaagtttaaaagcaaag
gatgtaataatttcagagaacactgctttaatagcatcacttagagccgaaattcaattg
tatgagacgaatatgacagaattacacggactaaatcaagtcttgagagatgagcaccag
gcactacaaattgcctttgcagctatcgaagagaagcttaggaaagcacaggacgaaaat
cgatctttggtggagcggctgataaaatataaatcgaaagatgcggataaaatgaatgaa
gaaaatgaacattttatcaagtcaagcaaccctaccgcgtttttgatcaacacgtttggt
agagttagtttcgggaaaaagagtgataaagtaaagaaggagttggaggaggcggcacgg
gagggtggtagtagaagtagtatcggctccggtgggagtgccgatgataagatatctgat
gcgatgccgtactatagcaccacgctgcccactaccgtagcgcttagatttgatgcacat
gatggcgaagttaatgcagtaaagtggagcccgaccgacaggatagtggccacgagcgga
gctgacaggaaggttaaattatggaacgtgtctaagttaacggcggagagccgcggcacg
cttgtcgggtcgaacgcgggcgttatgtccgtggacttcgactctaccggcgcgtacctc
gtgggagcctccaacgacttcgcgagccgggtgtggaccgtgggcgaccagaggctgagg
cacacgcttacgggccacagtgggaaggtgatggcagctaaattcctcggagaacctaca
aaagtgataactgggagccacgaccgaacacttaaaatatgggatcttaggagtcgaatg
tgtacggaaactaaatttgcaggatcatcttgcaatgaccttgttacatcagacggcgcg
gggtcaacaatcatctcgggacattttgacaagcgaataagattttgggacatacggaca
gaaatgtcggccaatcacatcgtgctccagggcaaggtcacctcgcttgacctcagtaga
gatagcaactatttgttggcctgcgtcagagacgacacggtacagttgatagacttgcgg
atgaactccatcgtacgttcatttagtcatgaatcgttcaaagtggggtgtgactggtcg
cgggcggcgttcgggccgggtgggcgactgctggccgtgggctcggccgagggcgccgcc
tacgtgtggaacacgcacacggggaagctggaggcgatcctcaaggaccactcgtaa
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