Leptidea sinapis (Wood White): 126965937
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Entry
126965937 CDS
T09272
Name
(RefSeq) piwi-like protein Ago3
KO
K02156
aubergine
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
126965937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126965937
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126965937
piRNA pathway
126965937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
RNaseH_pPIWI_RE
Bcl-2
ArgoL1
Motif
Other DBs
NCBI-GeneID:
126965937
NCBI-ProteinID:
XP_050665702
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Position
9:complement(6100282..6126888)
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AA seq
959 aa
AA seq
DB search
MDNAPKGRGRGLALIKEILARRSANEQGSPGSSEPPTAAPSVVGSYAPSEVGSYAPSEVG
SYAPSEVPSLLGSYSSSESPSVAPTVVGSASCMSTISIGGRGKIAALMSKMKEPKPGSGD
APLTCPASDVRPTTSTSMGRGMSLLKNLQMTQSSQSVGAAQSSVDKITQDLAASSIVSET
TSTPKNKYFREVKETPPVVMKGVSGTPYEVTANFIYLNFEENFVFEYEVRYEPDQDHRHL
RFKLLQEHKHLFKEKTFDGTTLYVPHKLPEDINKLVSTNPYDESKVNITIIFRRTRRLSE
MIHIYNVLFMNIMRDLELVRFGRQHFSQQGAVLIPQYKLEVWPGYVTAVDEYEGGLMLTL
DSTHRVLRTETVLSFIKEHFASAGANWGRIVTEKLLGCSVMTNYNKRLFRIDHIDLTMTP
KSTFEKKVDGETVKISYIDYYKKNYGIDIMDWDQPMLISKETKRISGSEKPVEYMICLVP
ELCQLTGLSDDQRSNFRLMKEVATYTRITPNQRHAAFKKYIDNVMKNESARNRLKNWGLS
IAPDTINIMARGLAPEPVLFGNNVKVPGKPNADWSFEACKNAVIHAVDLLSWAVVYTDRD
KQCTMNFIETIRRCGNPMGITISQPTLVRLPNDRIDTCAVTLKKIIHSQLQIVVVICSTK
TDDRYSSIKKICCAENPIPSQVINARTIMNQQKLRSITQKILLQINCKLGGTLWGISIPF
KTAMVIGIDCYHDPSRRLRSVCSFVASYNQSMTTWYSKAVFQEKGQEIIDSLKACLVDAL
KHYLRVNGRLPDRIIMYRDGVGDGQLKLLRDYEVPQLQICFKSLGDTDYKPTLTYVVVQK
RINTRIFSKTGNGFDNPIPGTVVDHAITRRDWYDFLIVSQKVNQGTVTPTHYVVVHDSSG
LTPDQCQRLTYKLCHLYYNWPGTVRVPAPCQYAHKLAYLIGQNVKQPASEILADKLFFL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggataacgcaccaaagggtcgaggccgtggcctggcacttattaaagaaattttagct
cgaagatcagctaatgaacagggaagccctggatccagtgagcctccaactgcagcacca
agtgttgttggaagctatgcaccaagtgaagttggaagctatgcaccaagtgaagttgga
agctatgcaccaagtgaagttccaagtttacttggaagttattcatcaagtgaatctcca
agtgttgcaccaactgttgttggctctgcaagttgtatgtctactataagtattggtggt
agaggcaagattgctgcccttatgtctaaaatgaaggaaccaaaaccaggatcaggagat
gctccattgacttgccctgcttctgatgtcagacctacaacctcaacatcaatgggaaga
ggaatgagtctgcttaaaaatttacaaatgacacagtcaagtcaatctgtgggtgctgct
cagagttctgttgataaaatcactcaggatctagcagccagctcaattgtatcagagact
acctctactccaaagaataaatactttagggaagtcaaagaaacaccgccagttgttatg
aaaggagtgagtgggacaccctatgaagtgactgctaactttatctatcttaacttcgaa
gaaaacttcgtatttgagtatgaagtcagatatgaacctgatcaagaccatagacatcta
cgttttaaattacttcaagagcacaaacacttattcaaggagaagactttcgatggtaca
acattgtatgtgccacacaaactgcctgaagatataaacaaacttgtctcaacaaatcca
tatgatgaaagtaaagttaatataactataatatttcgtcgtacgcgccgtctaagtgag
atgatccatatatacaatgtgctgttcatgaacataatgcgagacttggagttagtgaga
ttcggacgtcagcacttcagtcaacaaggagctgtactgataccgcagtataaactggag
gtttggcctggatatgtcacagctgtggatgaatatgagggtggtttgatgttaacgttg
gactcgacacatagagttctccgcacagagactgtgctgtcatttataaaggagcacttt
gcaagtgctggcgctaattggggtcgtattgtaacagaaaaacttctaggttgttctgtg
atgactaattataataaacgcctgtttcggattgaccacatagacttaacaatgacacca
aaatcgacatttgaaaaaaaagtggacggagaaacagtcaaaatctcttacattgactac
tataagaaaaattatggtattgacataatggattgggaccagcctatgttgatatcaaaa
gaaacaaaacgaatctccggttcggagaaaccagtggaatacatgatatgtctggttccg
gagctgtgtcagttgacaggcctcagtgacgatcagagaagcaactttagactcatgaaa
gaggtggctacgtacaccaggataacaccaaaccaacgtcatgctgctttcaaaaagtac
attgacaacgttatgaagaacgaatcagcccgaaatcgcttaaagaactggggactcagc
atagcgccggatacaattaacataatggcaagaggcttggctcccgagcctgtgttgttt
ggcaataacgttaaagtgccaggcaagcctaacgcggattggagctttgaagcttgcaag
aacgcagtaatacacgctgtcgatttactgtcctgggcagtggtgtacacagacagagat
aagcagtgcacaatgaactttatagaaacaataagacgatgtgggaacccgatgggcatc
acaattagtcaaccaactctagttcgtttgcccaacgatcgcattgacacgtgcgcggtg
acgctcaagaagattatacactcgcaactgcagatcgtcgtagtgatatgctctacgaag
actgacgaccgttactcgtctattaagaagatatgctgtgcggagaatccaataccctca
caggtgataaacgctcggacgataatgaaccaacagaagttgaggtctataacacagaaa
atcctcctgcaaattaactgcaagcttggtggtactctgtggggtattagtataccattc
aagacagcaatggtaattggtattgattgctaccacgacccctcgcggcgtctacgaagc
gtatgctctttcgttgcctcatacaatcaatcaatgactacctggtattcgaaggctgtt
ttccaagaaaaaggtcaagagatcattgacagcctcaaggcttgtttggtggacgcgctt
aaacactatctccgagtcaatggacgacttccggatagaataattatgtacagagatggc
gtgggtgatggccaactgaagttactcagagattatgaggtgccccaactgcagatatgc
tttaagagcctcggcgacactgactataagccgacgctaacctatgttgttgtgcagaag
agaataaacactagaatattctcgaaaactggtaatggattcgacaacccaatccctgga
accgtggttgatcatgctattacaaggagggattggtacgacttcttaatagtttcccaa
aaagtgaaccaaggtactgtgactcccactcactacgttgtagtccacgatagcagtggc
ctgacacctgaccagtgtcagcgactgacatacaagctatgtcacctgtactacaactgg
cccggcacggtacgagtacccgctccgtgccagtacgcgcacaaactagcttacctcatt
ggccagaatgttaagcagccggcgtcagagatattagctgataagttgttcttcttgtaa
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