Leptidea sinapis (Wood White): 126965970
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Entry
126965970 CDS
T09272
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsin03016
]
126965970
Enzymes [BR:
lsin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
126965970
Transfer RNA biogenesis [BR:
lsin03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
126965970
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
TRAM_2
DUF1450
Motif
Other DBs
NCBI-GeneID:
126965970
NCBI-ProteinID:
XP_050665778
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Position
1:16319348..16333500
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AA seq
537 aa
AA seq
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MPAAFAEFIDDIEDLVSSQDITPKERYASRKSVSVRSKKREIKEYESAEKVILESVVPGT
QTIYVKTWGCAHNNSDSEYMAGLLAAHGYKLTEDKWQAQLWLLNSCTVKNPSEDHFKNEI
MLGQSRGIHVVVAGCVPQGAPRSSYLQGLSVVGVQQIDRIVEIVEETLKGHTVRLFGSKK
TGEGRKAGGASLLLPKVRKNPLIEIISINTGCLNQCTYCKTKHARGELGSYPPDEIVERA
RQSFKEGVCEIWLTSEDTGTYGRDIGTSLPELLWRLVEVIPEGCRLRLGMTNPPYILEHL
DQMARIMHHPRVYKFLHVPVQSGSDQVLADMKREYTRADFERVVEFLRERVEGITIATDI
ICGFPTETAADFDQTMSLCRRHRFPSLFINQFFPRPGTPAANMTRVPSQEVKKRTKELSE
FFRSYEPYGHKIGQIQEVLVTDVSHDKNYFVAHNEFYEQVLVPKEERYMGKMLTVRICSA
SKFSMVGEVIDKPKMAGLVRPLRKGEVSGVKSERGVSVPIVVLLLAVFARLLWIFLL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgcatttgcagaatttatagatgatattgaggatttggtgtcttctcaggat
atcacaccgaaagaacgatatgcgagtagaaaaagtgtcagcgtcagatcaaaaaagcgt
gaaattaaagagtacgaaagcgctgaaaaagtgattcttgaaagtgttgttcctggtact
caaacaatatatgtcaagacatggggctgtgctcacaacaattcagattccgagtacatg
gctggtttattagcagctcatggctataagctcacagaagacaagtggcaggcacaactg
tggcttcttaattcttgtactgttaaaaatccttcagaagaccactttaagaatgagata
atgctgggacagagtcgcggcatccatgtagtggtggcggggtgcgtgcctcagggggca
cctcgctcttcctacctacagggtctcagtgtagtgggggtgcaacagatcgatagaatt
gttgaaattgttgaggaaacactaaaagggcacacagtacgcctgttcggatcaaaaaag
acaggggaaggtcgaaaagccggcggtgcctcattactcttacccaaagtacgcaagaac
ccgctgattgagatcatttcgatcaacaccggctgtctcaaccagtgcacgtactgcaag
acaaaacacgcgcggggagaactgggcagttacccgcccgatgagatcgtggagagggcg
cgacagtccttcaaggaaggtgtctgcgaaatatggctgacgagtgaagatactggaacg
tacggtcgtgacatcggcacctcgctgccggagctgctgtggaggctggttgaggtgatc
cccgagggctgccggctgcggctgggcatgaccaacccgccctacatcctggagcatctc
gaccagatggccagaatcatgcaccatcctcgagtctataagttcctccacgtgccggtt
cagtcaggcagtgaccaggtgctggctgacatgaagagggagtacacccgggctgacttc
gagagggtggtggaattcttaagggagagagtagagggcatcacgatcgccacggacata
atctgcgggttccccacggagacggcggccgacttcgatcagaccatgtctctgtgtcgc
cgccaccggttcccctcgctcttcatcaaccagttcttcccgcgcccgggcacacctgcc
gccaacatgacgcgagttcctagtcaagaagttaaaaaacgaacgaaagaactttcagaa
ttctttcgatcatacgaaccgtacggccacaagataggacagatacaagaagtgctagtc
acggacgtttctcacgacaaaaattatttcgtggcccacaacgagttttacgaacaagtg
ctcgtgcccaaagaggagagatacatgggcaagatgttgacggttcgtatctgcagcgcg
agtaagttctcaatggtcggtgaggtcatagacaaaccaaagatggcggggctggtgcgg
ccgctgaggaagggagaggtgtccggcgttaagagcgagagaggtgtgtccgtgccgata
gtagtgttgttattagcggtgtttgcgaggttgttgtggatatttttattataa
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