Leptidea sinapis (Wood White): 126966136
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Entry
126966136 CDS
T09272
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126966136
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsin04812
]
126966136
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
126966136
Membrane trafficking [BR:
lsin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
126966136
Cytoskeleton proteins [BR:
lsin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126966136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
MIT
TetR_C_30
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
nSTAND3
NPHP3_N
AAA_19
IstB_IS21
DUF7348
Motif
Other DBs
NCBI-GeneID:
126966136
NCBI-ProteinID:
XP_050666024
LinkDB
All DBs
Position
9:complement(12154839..12210186)
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AA seq
669 aa
AA seq
DB search
MVAGDEFNGGRLSRKTTRSPNRKCKKTDADVAKESSLRNASQPSVHKRNLYVVSFPIIIL
FNLMRSVLYQLFIIFKYLYSASHKLIHRPRKSGECNFEVVVKNGVVSTEIVQGEEMPYTN
NVGPGDPLLAKQKHHHRKAFEYISKALKIDEENEGQKELAIELYKKGIYELERGIAVDCW
GGRGDAWQRAQRLHDKMKTNLGMAKDRLHFLANLVALSKLGVESEQERCEKKPTESPLKA
RRPIEKSKTTLLAHTDSHSCQTKPPTEVAGRKLITSGRRTQSSMGGPLMKSQTLPRSMGR
SSSQPNSSNGGYSRYPVKPASTPPAVKRQLSGAYQVPVNGSPVRRVVGGGSQKGTPTRSR
TPQPALAVRGVDPKLVQLILDEIVEGGPKVHWDDIAGQESAKQALQEMVVLPSLRPELFT
GLRSPAKGLLLFGPPGNGKTLLARCVAAECSATFFSISAATLTSKYVGDGEKMVRALFQV
ARELQPSIIFVDEVDSLLCERSSSEHEASRRLKTEFLVEFDGLPAAGADRLVVMAATNRP
QELDEAALRRFPKRVYVTLPDVRTRDALLRRVLTRGAAASTLSDHELARLAALTDGYSGS
DLTALCRDAALGPIRELDPEEVKCLDLSLVRSITYQDFIDALKRIRPSVSPHSLVAYEKW
SVQYGELGV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggttgccggtgatgaatttaatggtggtcgtttatcgcggaaaactactagatcccct
aaccgtaaatgcaagaaaacagatgcagatgtagcaaaagaatcatctttgcgaaatgct
tcgcaaccctctgttcataaaagaaacctttacgtggtttcgtttccgattattattctt
tttaatttgatgcgctccgttctgtatcagttgtttattattttcaaatatctttattca
gcatcacataaattaattcataggcctcgtaagagtggagagtgtaactttgaagttgtt
gttaagaacggtgttgtgtcaactgaaatagtacaaggtgaagagatgccgtataccaat
aatgtgggcccaggggatcccctacttgcaaagcaaaaacatcatcatcgcaaagctttt
gaatacatatcgaaagctttgaagattgatgaagagaatgaaggtcagaaagagctagca
atagagctctataagaaaggaatttatgagttggagcgaggcattgctgtggactgctgg
ggtggtcgcggggatgcctggcaaagggctcagaggctccatgacaaaatgaaaacaaac
ctgggcatggcaaaggaccgcttacacttccttgcaaaccttgtggccctcagtaagttg
ggggttgagagtgagcaggagagatgtgaaaaaaaacccaccgagtcgccacttaaggct
agaaggcccatagagaagtccaagacgacactgctagcccatacagatagtcacagttgt
caaacaaagcctccaactgaagttgccggccggaagctaataacatcaggtcgtagaacg
cagagtagcatgggcgggcctctcatgaaatcccagactctgcccaggtccatgggacgc
tcttcatcgcaacccaacagctcgaatggtggctacagcaggtatcccgtgaagcctgcg
tccacaccacccgctgtcaagcgacaactctctggcgcctatcaggtaccggtaaacggg
tcgccggtacgaagagtggtgggtggtggctcccagaaaggcactcccaccagaagcaga
accccgcagccagccctggcggtacgaggggtcgatcccaagctggttcaacttatactg
gatgagatcgtcgaaggaggacccaaggttcactgggatgatatagctggtcaggagtca
gcgaagcaggctcttcaagagatggtggtgctaccttcgctgcgaccggagctgtttacg
ggactcaggtcacccgcgaagggattgctgctctttggcccaccagggaatggtaagacc
ctgctggcacggtgcgtggctgccgaatgttcggcgacgttcttctccatatcggcggcc
acgctcaccagcaagtacgtgggcgacggggagaagatggtgagggcgctgttccaagtg
gccagagaacttcagccgtcaataatattcgtggacgaggtggactcgctgctgtgcgag
aggtcgagcagcgagcacgaggcgtcgcgccggctcaagacggagttcctggtggagttt
gacggactgccggccgccggcgccgaccggctcgtggtcatggccgccaccaaccggccg
caggagctggacgaggcggcgctgagacgtttcccgaagcgcgtgtacgtgacgctgccg
gacgtgcgtactcgcgacgccctgctgcggcgcgtactgacgcgaggagccgccgcgtcc
accctcagcgaccacgagctggcgcgactggccgcgctcacggacggctactcgggcagt
gacctcaccgcgctgtgtcgagacgccgcgctcgggcccatccgagaactagatcctgag
gaggtgaaatgcctcgacctgtctttggtgcgaagcatcacgtaccaggacttcatagac
gcgttgaagcgaatcaggccgtcggtgtcgccgcacagtctcgttgcttacgagaagtgg
tctgtacagtacggagagctcggggtctga
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