KEGG   Leptidea sinapis (Wood White): 126966319
Entry
126966319         CDS       T09272                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126966319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsin03021]
    126966319
Transcription machinery [BR:lsin03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     126966319
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 126966319
NCBI-ProteinID: XP_050666264
LinkDB
Position
10:12499534..12511308
AA seq 575 aa
MPTQYDEERTWEGQNPSQYDDDNAEDVIDNPEEVLQECLEKFKTPDYIMEPGIFTQLKRY
FQAGGNPEQVIEQLSINYSAVAQMANLLAEWLILAGVKVTEVQAMVENHLKDMIIKTFDP
KKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEDYPDCLMLNFTIKLISDAGFQGEIT
SISTAAQQIEVFSRVLKSSIVGFLQSSDGWQSSVNECANMVCHGAHTYVYSQVIVYILSQ
EPRGGAIMKRLSQEITKCAKQSGHDVTPITLALTAGEAWRGARTALAAMLSRGALNPADI
SVLFRAYTQPEPPPVHLLRIPQFLELLVDSLFKAGSKVNPEHKSKYIYLLAYAASVCEGL
TPGRPVKDELKATLQAIEKIHTVCSSSASSSELIAELPALYHCIRFPVVGMGVLVWVEGV
VTEPSYFKLCTEHCPIHLALLDEVASCHPLLHHRLLTLLVKLFESKQEELEILVQLELKK
MLLDRMVNLLSRGCVVPVLMYIKNCWKKDDTDISLIRYFITEVLDAIAPPYTSEFVKLVL
PLVENEEITGTMRAEGENDPVSEFIVHCKAHYVVP
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgcctacacaatatgatgaagagcgaacctgggaaggccaaaatccaagtcaatatgat
gatgataatgcagaagatgtcatcgataaccctgaagaagtattacaagaatgtctggag
aagtttaaaactccagattatattatggaaccgggcatatttactcagttaaaaaggtat
ttccaagctggtggaaatccagaacaagtaattgagcagttgtcaataaactacagtgct
gtggcacaaatggcgaatttgttagctgaatggcttatacttgcaggtgtaaaggtgact
gaggtgcaggctatggttgaaaatcatttaaaagacatgattataaagacttttgatcca
aaaaaggctgatacaatatttactgaagaaggtgaaacaccagcatggctcactgaaatg
attgaacatcctacttggagatcattgatatataggcttgctgaggattacccagactgc
ttaatgttaaatttcacaataaagctgatttcagatgcaggcttccagggtgaaattact
agtatctctacagcagcacaacagatagaagtgttctcaagggttctgaaatcctcaatt
gttggattcttgcaaagctctgatggctggcaatccagtgtaaatgaatgtgcgaatatg
gtatgccatggagcacatacatacgtttatagccaagttattgtttatattttatcacaa
gagccacgcggtggtgcaatcatgaaaaggctgagtcaagaaattacgaaatgtgcgaaa
cagagtggtcatgacgtcacgcccatcacattagctctgacggctggcgaggcttggcgc
ggtgcacggaccgctctggcagccatgctctcccgcggcgcgttgaaccccgccgacata
tcagtcctcttccgagcctatactcaacccgaaccgccgcccgttcatctcttaagaata
ccacaattcttggaactgctagtagactcattattcaaggccggaagtaaagtgaaccct
gaacacaaatcaaaatatatctaccttctcgcttatgcggcgagtgtctgcgagggattg
acaccaggccgaccagtcaaagatgaattaaaagcaacactgcaagcaatagaaaagata
catacagtttgcagtagttcggcgagctctagtgaacttattgctgaactaccggcatta
taccactgcatcagattccctgttgttggaatgggagtgcttgtatgggtggagggtgtg
gtgacagagccgtcatacttcaaattgtgcacagaacattgtccaatccacttagcgctg
ttggatgaagtggcctcgtgtcatccattacttcaccatcggctgttgacattacttgtc
aaactttttgaatccaaacaggaagagttagaaatattagtgcagcttgaactgaaaaaa
atgcttctcgatcgaatggtaaatctactcagtcgtggctgtgtggttccagttttaatg
tatatcaagaattgttggaaaaaggatgatactgatatctcgctcataagatatttcata
acagaggttctagatgcaatagcaccaccttatacatcagagtttgtaaaattagttcta
cctttagttgaaaatgaggaaatcacaggaactatgagagctgaaggagaaaatgatcca
gtttcagaatttatagtgcactgcaaggcgcattacgttgttccataa

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