Leptidea sinapis (Wood White): 126966446
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Entry
126966446 CDS
T09272
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03015
mRNA surveillance pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126966446
09123 Folding, sorting and degradation
03018 RNA degradation
126966446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126966446
03041 Spliceosome [BR:
lsin03041
]
126966446
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126966446
mRNA cycle factors
Stress granule specific factors
126966446
Spliceosome [BR:
lsin03041
]
Complex C
Other components
Complex C specific factors
126966446
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_10
RRM_RdRP1_2
RRM_PARP14_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
126966446
NCBI-ProteinID:
XP_050666445
LinkDB
All DBs
Position
10:12378997..12382646
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AA seq
609 aa
AA seq
DB search
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSIAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPVDAERALDSMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFN
AFGNILSCKVAQDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGHITSHKVMYKEDGSSRGFGFVAFE
DPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFY
GPAQMTQIRPSPRWTQPPVRPATQTAASAYPNMQAPFRPAPRGPAQNTLRASLGARPITG
QQGVPATSSIRAPLVTSGRPAGYKYTANMRNPPAPQPAVHIQGQEPLTATMLAAAPLQEQ
KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ
AKQQATKKE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtccacctaattacccaatggcatctttgtatgtcggcgatttgcattca
gacataaccgaggccatgttgttcgaaaaattttctatcgctggtcccgtcctctcaatt
cgcgtatgtcgcgatatgataacgcgtaggtctcttggatacgcctatgttaatttccag
cagccagtggacgctgaaagagctttggattccatgaattttgatatgattaaaggtaga
ccgatcagaataatgtggtcccaaagagatccctctctacgcaagtcaggtgtgggtaat
gtatttatcaaaaaccttgataaatctatagacaacaaggctatgtatgacacctttaat
gcatttggtaacattttgagttgcaaagtagcccaagatgaaaatggagcatccaaggga
tatggatttgtacattttgaaacagaagaagctgctaataaatctattgaaaaagtaaat
ggaatgctgttgaatggaaaaaaagtatatgttggtagatttattccccgcaaagaacgt
gaaaaggaattaggagagaaagcaaagcttttcactaatgtttatgtcaaaaactttggg
gaagatttttcagatgaaatgctcagagaaatgtttgaaaagtacggccatattacaagc
cacaaagttatgtacaaggaagatggatcatctagaggatttggttttgttgcttttgaa
gacccagatgcagctgaacgagcatgcatggaacttaatgggaaagaattggttgagggg
aaaccattatatgttgggcgtgctcagaaaaaagctgagagacagaaggaattaaaacgt
aaatttgagcagttaaagtctgaacgcttaactcgttaccaaggtgtcaatttatatgta
aaaaatttggatgatactatagatgatgaaaggcttcgtaaggaatttgctccatttgga
acaataacatctgccaaggttatgctggaagatggtcgcagtaaaggatttggatttgtc
tgtttttcatctcctgaagaagctactaaagctgtaacagaaatgaatggtcgtattgta
ggaacaaaacctctctatgtagctttagctcaacgtaaagaggataggaaagctcatctg
acttcacagtatatgcaacgtatggcaagcatgaggatgcaacaaatgggacaaattttc
caacctggtagtgccggaggctattttgttccaacaattccaccagctcagaggttctat
ggcccagcgcaaatgactcaaatcagaccatctccccgttggactcaaccaccagtaaga
ccagcaactcaaactgcagcttcagcatatcctaacatgcaagctccattccgtcctgca
cctcgtggtccagcgcaaaacacccttcgtgcatcattaggggctaggcccataacaggc
cagcaaggagttcctgcaacttcatctattcgcgctcctttggttactagtggacgtcct
gcaggatataaatacactgctaatatgcgtaacccgccagctccgcaaccagctgtacat
atccaaggccaagaacctctgacagcaacaatgttggcagctgctccattgcaagagcag
aagcaaatgttgggtgagcgcctgttcccattgattcaaaggatgcaccctgacttagct
ggtaaaattactggcatgttacttgaaattgacaattctgaacttcttcacatgttagaa
catggagaatcattgaaagcaaaggtggatgaggcagttgctgttttgcaagctcaccaa
gctaagcagcaagctacaaagaaggagtag
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