Leptidea sinapis (Wood White): 126966719
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Entry
126966719 CDS
T09272
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126966719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126966719
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126966719
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_12
TPR_8
TPR_17
ANAPC3
TPR_16
ANAPC8
Motif
Other DBs
NCBI-GeneID:
126966719
NCBI-ProteinID:
XP_050666901
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All DBs
Position
1:11423659..11425612
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AA seq
566 aa
AA seq
DB search
MANNKDEIVVAAYQSYLKSDYVSTQERLNELETLVGNNAVLLKRIKHNKAVVEFAASDWK
NIDSFRKSITDIIGATYPDEEITILLPFAAYNYAVILYHSRYYYQSSVILENLLTSNVIH
DTKLLHQVVLLLLECTLCRRTYNKTLEIAKSYGESLKSNNELCDLFQRLVCRAQVYLGQK
VMLKLDTIENMFIMAQQHYLNGNVNDAVNTLAIYKTLKYNYNMKNEGEDIWAAINNNLGV
IYLSLKKPYLASKYFQNALKEHFMSMESEDSERLTVCKDRPIYVYNLGLALLATKNLEGA
FECLVEAARHYPNNPKVWVRLAECCIKKCCSEEAQQFTVKKLGSGPHTRILVTKEKEKYS
ASGESFAIPSLSLEFAALCLRNATTLLPNQEPPTDVTEPMIQAPPGPPINWKERCELKNL
ILLLQSYIFLQLQDPLAALVSANDLLSQTDCSKIHKTWAHVYAAEALIFLDKTVEAIEHL
QPAMIHELVSEFSDKMRDVIGVAVWTKAAVCNILRGDLVQARKVLQQISNSKVLPLQMYV
EICLGNIESCRTILRKIRYTNTNVSI
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaataaagacgaaattgttgttgcggcttaccaaagttatcttaaaagcgac
tacgtatcaactcaagaacgtttaaatgaacttgagactttagtaggaaacaatgctgta
ttactgaaacgaataaaacacaataaagctgtagttgaatttgctgcaagtgattggaaa
aatatagattcattcaggaaatcaataactgatatcataggagctacttatcctgatgaa
gaaataacaatacttcttccatttgctgcgtataactatgctgttatcctctaccattca
agatattattaccaaagctcagtcatattggaaaacttattaacctctaatgttattcat
gataccaaattattacatcaagttgttttattactcttagaatgtacattatgcagacgg
acatataataaaacacttgaaatagctaagagttatggtgaatcattaaaatctaataat
gaactgtgtgacttgtttcaaagactggtctgtagagctcaagtatatcttggccaaaaa
gttatgttgaaacttgatacaatagagaacatgttcataatggcccaacaacattattta
aatggaaatgtaaatgatgctgtcaatacattggctatctataaaacacttaaatataat
tacaatatgaaaaatgagggcgaagacatatgggctgccataaataataaccttggagta
atttatttatcattgaaaaagccatatttggcttccaagtattttcaaaatgcgctgaag
gaacattttatgagtatggagagtgaagatagtgagaggttaacagtctgcaaggatcgc
ccaatatatgtttataatttaggactagctctattagcaactaagaatttagaaggtgca
tttgaatgtttggttgaagctgcaagacattatcccaataatcctaaagtatgggttaga
ctggcagaatgttgtatcaaaaaatgttgcagcgaagaggctcagcaatttactgttaaa
aagctgggaagtggaccacatacaagaatattggtgactaaagaaaaagagaaatactca
gcatctggagaatcctttgctataccttctctatcacttgaatttgctgcattatgctta
agaaatgctacaacattactaccaaatcaggaacctccaacagatgttacagaaccaatg
attcaagctccccctgggcctcctataaactggaaggaaagatgtgaattgaagaatctt
atactactcttacaaagttatatatttttgcagttacaagatccgttagcagctttagta
agtgctaatgatttactatctcaaacagattgctctaaaattcataaaacatgggcacat
gtatatgctgcggaagcattgatatttctagacaaaacagttgaggctatagaacattta
cagccggctatgattcatgagctggtttcagaattttctgataagatgcgtgatgtaatt
ggagtagctgtttggacaaaagcagctgtttgtaatatactaagaggggatcttgtgcaa
gcaagaaaagtattgcaacaaattagtaactctaaagttttgccgttgcagatgtatgtt
gaaatttgtttgggaaatatagaaagttgtcgtacaattttgcgtaaaattcgctataca
aatacaaatgtatcaatatag
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