KEGG   Leptidea sinapis (Wood White): 126966835
Entry
126966835         CDS       T09272                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126966835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsin03041]
    126966835
   03036 Chromosome and associated proteins [BR:lsin03036]
    126966835
Spliceosome [BR:lsin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126966835
 Complex B
    126966835
 Complex C
   U2 SnRNP specific factors
    126966835
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    126966835
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 126966835
NCBI-ProteinID: XP_050667051
LinkDB
Position
11:complement(11715749..11740844)
AA seq 1337 aa
MDKIPRTHEAIEAQIREIQSKKNELPENGSAKGVSLADTYYDADIYDSSGQTGKSRYDGY
VTSIAANDENEDEDIENVPVTQKRPGYTAPASILNDIAQSDKDYDPFADKRRPTIADRED
EYRQKRRRMIISPERIDPFAEGGKTPDIGSRTYTEIMKEQYLRAEETELRKKLLERAQEG
TLKPVSHANGDATKAATKRRGRWDQSSEETPTVKKVVSATPSSQATPSWENERGAWEETP
SAMGRGGETPGATPSARVWDATPGHATPGHATPGRETPAQQASRRNRWDETPKTDRETPG
HNSGWAETPRTDRGAGVEGIQETPTPATKRRSRWDETPGATPIAATPTPSHATPSHATPT
HATPVHATPTPHTPMFTPGGSTPVGVKAMAMATPTPGHIAAMTPEQLQAYRWEKEIDERN
RPYTDEELDSMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLAGTPIGFFMQTEEAGGSA
AAAARLLDPQPKGSQQLPFMKPEDAQYFDKLLIDVDEDSLSPEELKERKIMKLLLKIKNG
TPPMCKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLV
EIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFL
KAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEPQYIM
DEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDDNEQYRKM
VMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKP
YLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGP
EFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNIFETSPHLV
QAFMDAVEGMRVALGPVKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQDALVAGYPRI
QNEPNNHFIRYELDYML
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggataaaatacctagaacccacgaagcaattgaagctcagatacgtgaaatacagtca
aagaaaaatgagctgccagagaatggttcagcaaaaggtgtatccttagctgatacttat
tatgatgctgacatatatgatagctctggccagactgggaaatctagatatgatggatat
gtgacttctatagctgccaatgatgaaaatgaggatgaagatatagaaaatgtccctgtt
acacaaaagaggccaggctatacagccccagcatcaattctaaatgacatagcacagagt
gacaaagactatgacccatttgctgataaaagacgcccaacaattgcagatagagaagat
gaataccgtcagaagaggcgtaggatgattatatctcctgaaagaattgatccttttgca
gaaggtggaaaaacccctgatattggttcaagaacatacacagaaattatgaaagagcaa
taccttagggctgaagaaacggagttacgaaaaaaactattggaaagagctcaagaggga
acattgaaacccgtttctcatgccaatggtgatgctactaaagcagctactaaacgtaga
ggcaggtgggatcaaagttctgaagagacacctacagtgaagaaagttgtatcagctaca
ccaagctcccaggctacgccatcctgggaaaatgagagaggtgcttgggaagaaactcca
agtgcaatgggtagaggtggagagacacccggcgctactccctcagctcgtgtgtgggac
gccactcctggacatgcgaccccaggccatgcaacacctggacgtgaaacaccagctcag
caggcctccaggcgtaatcgctgggatgagacacctaaaactgacagagaaacaccgggc
cacaacagtggatgggctgaaacgccgcgtactgatcgcggagctggtgtggaggggatc
caagaaacgccgacccctgctacgaaacgtcgttcccgctgggacgaaacaccgggcgct
acgcccattgcggctactcccacaccttctcatgctacgccatcacatgccaccccgacc
catgcgacacctgtgcatgccactccgacacctcatacacccatgtttacacctggtggc
tcaaccccagttggagtgaaagcgatggcaatggccacaccaacccctggacacattgca
gccatgactccagagcaattgcaagcttaccgctgggaaaaagaaatagatgaacgtaat
agaccgtacactgacgaagaactcgattccatgttcccacccgggtacaaggttttgccc
ccacctgctggttacgtgcccatacggactccggcccgtaagctgaccgctacgcccacg
ccgttggctggtaccccaatcggatttttcatgcagacggaggaagccggtggctcggct
gctgccgccgccaggcttctagatccgcagcccaaggggtcccagcagctgcccttcatg
aagcccgaggacgcgcagtacttcgacaagctgctcattgacgtcgacgaagactctctg
tcgccggaggaactcaaagagagaaaaattatgaaacttcttctcaaaattaagaatggt
acaccacccatgtgtaaagcggcgttgcgtcagataacagacaaggcgcgagagtttggt
gcaggcccactcttcaatcagatactgccgctgctcatgagtcccaccctcgaggaccag
gaacgtcacttgcttgtcaaagtcattgatagaatattgtacaaactggacgatttggtg
cgcccctatgtacacaagattcttgttgtaattgagcccttgttgatcgacgaagactac
tacgcgcgtgttgagggtcgagaaattatctcgaacctagcgaaggctgccggcctggcg
accatgatctccacgatgagaccagacattgacaacattgatgaatacgtgcgaaacaca
accgccagggctttcgcagtagtcgcttctgctttgggtataccatcccttctaccattc
ttaaaggctgtgtgtagatcaaagaagtcatggcaagcgagacacactggtatcaagatt
gtccaacagatcgccattctaatggggtgtgccatattaccccacctcaagtcacttgtg
gagatcattgagcatgggttggttgatgaacaacaaaaggtcagaacaattacggcctta
gctagtgctgcattagccgaagcagcaacaccttatggtatcgagtccttcgactctgta
ctgaaaccattgtggaagggtataagaacccaccgtggtaagggtctggcagccttcctg
aaggccatcggttatctcattcctcttatggacgccgagtacgctaattattatacccgt
gaagtaatgttgattctgatcagagagtttcagtctcctgatgaagaaatgaagaagatt
gtcctcaaggtagtgaaacagtgttgtggcacggacggtgtggagcctcaatatataatg
gatgaaatattaccacatttcttcaaacacttctggaaccatcggatggcacttgatcgt
cgaaattatcgacaactggtcgacactactgtggagatagcgaataaagttggtgcttcg
gaaattattaacaggatagtggacgatctcaaagatgacaatgaacagtacagaaaaatg
gtgatggagtctattgaaaagattctggcaaatttgggcgctgctgatattgactccaaa
cttgaagaagcactcattgacggcatactttacgcgttccaggaacaaacgactgaggat
gtcgttatgctaaatggttttggcactatagtgaatcagttggggaaacgtgtaaaacca
tacttgccccagatctgtggtataattctgtggaggatgaacaacaaatccgccaaggtc
cgccaacaggcagctgacctcatctccaggattgcagttgtcatgaagacatgtcaggag
gagaagctaatgggtcaccttggtgttgtgttgtatgagtacctcggggaggagtacccg
gaggtgttgggttcaattctcggagccctgaaagctattgtcaatgttataggtatgact
aaaatgaccccgcccattaaggacctgttaccaaggttgacacccattttgaagaacaga
catgagaaagtgcaagagaactgtatcgatttagtcgggcgtattgcagacagaggccca
gagtttgtgtcggcgagggaatggatgaggatatgcttcgagttgctggagctgttgaag
gcccacaagaaagcgatccgaagagcgaccgtcaacaccttcggttatatcgccaaggcc
atcggtcctcacgatgtgctcgccaccctacttaacaatctgaaggtccaggaacggcag
aacagagtgtgcaccacagtcgccattgccatcgtggctgagacgtgttcgccattcacg
gtgcttcccgcgctcatgaacgagtaccgcgtgcccgagctcaacgtgcagaacggagtg
ctcaagtctctgtccttcctgttcgagtacatcggggagatgggcaaggattacatttac
gccgtttgccctctgctggaagacgcgttgatggacagagatctggtccaccggcagacg
gcgtgcgcggccatcaagcacatggcactaggcgtgtacggtttcgggtgcgaagacgct
ctcatacacctgctgaaccacgtgtggcccaacatattcgagacgtccccgcatctcgta
caggcgttcatggacgccgtcgagggcatgcgggtcgcgcttggcccggtcaaaatactg
caatacgcgttacagggattgttccaccccgctcggaaagtccgggatgtttattggaag
atctacaacacgctgtacatcggaggacaggacgcgctcgtggcgggatatccccggata
cagaatgaaccaaataatcactttattcgatacgaactggattatatgttgtaa

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