Leptidea sinapis (Wood White): 126966846
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Entry
126966846 CDS
T09272
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126966846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126966846
03036 Chromosome and associated proteins [BR:
lsin03036
]
126966846
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126966846
Coactivators
SAGA/TFTC/STAGA complex
126966846
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126966846
STAGA complex
126966846
TFTC complex
126966846
SAGA complex
126966846
SLIK complex
126966846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
126966846
NCBI-ProteinID:
XP_050667066
LinkDB
All DBs
Position
11:10246991..10273769
Genome browser
AA seq
651 aa
AA seq
DB search
MKRNKNDAIKAAVVSYLERRNYPDVDVFNTSKSVSRSAEEMAVATIVQSESSRANSILFS
CINNDPGQYDIQYSRLFNFIKDIKVEKIKNELLGLVTPLLCHLYLEMLRGGHGGPAQMFL
KRHSATLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDD
IGTVYTLQEIESRPTIAAFRSCKFDICLSQESVNTLKGYLAKNGHVLLIQVLQTWFHIDG
NGESKKKDDDEDDDTGVDFKDKVNSFEANLTNTNDIFSKCNGHTEFESADKELKDLQDAI
KGVRESLAPIKLYKIAAPDTNLVCAKTDQFCNMLCAGFTNSEVRLWDLGQNNVNRRVNKN
ISEFELACNIVPLPEDIPDNTRQIGTGIALRGHSGPIQAVSVLSREEIVLSASHDSTMRA
WRVSDYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPIRVFVGHVSD
VTCVKFHPNEAYIATGGADRTVRLWSVCEARLVRVLCGHREQLRSLAFCPTGTLLASAGD
DKKIKIWDLTACTCIHEYRGHYGKVTSLDWSAVGKPSLTNRISSNVNDMTSDSSILCSAG
MDGIVKVVWDSQFKNKSSSNQENTSTYNTKCSYLVDIQVHPDWMVAIGTKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaacaaaaatgatgccattaaagcagccgttgtatcctacctagagcgccga
aattatccggatgtcgatgtattcaataccagtaaatccgtaagccgtagtgccgaggaa
atggcagttgctaccattgttcagagtgagtccagtagagcaaactctatattattttcc
tgtataaacaatgacccagggcagtatgacatacaatattcaaggctattcaatttcata
aaagatatcaaggtagaaaaaataaaaaatgaactcctaggattggtaaccccattatta
tgccatctttatttggaaatgttaagaggtgggcatggtggccccgcccaaatgtttctg
aaaaggcactctgcaacactaccacaaaaagatttatcatatcatcaacctatagatggg
aatctaccgtctgccctataccggcctaatagcttagagcagttatttaattctctacag
aatggtacgattgataatgagactccagaaaaagattacatgaatcagttgctagatgat
attggaacagtatacacactccaggaaattgaatctcgtccaactattgcagcttttcga
tcctgtaaatttgacatatgcttatctcaagaatctgtgaacacacttaaaggatatcta
gcaaaaaatggccatgtattactgatacaagttttgcagacatggtttcatatcgatgga
aatggagaaagtaagaaaaaagatgatgatgaggatgatgacacaggagttgactttaaa
gacaaggtcaatagttttgaagcaaatcttactaatactaatgatatattttccaaatgc
aacggacacacggagtttgagtcagctgataaagagttaaaggatctgcaagatgcaatc
aagggtgtgcgagaatcattagctccaatcaaattatataaaatagcagcacccgataca
aacttagtatgtgcaaagaccgatcagttttgcaatatgctgtgtgctggcttcacaaat
tctgaagtcaggctgtgggatcttggacagaataatgtaaacagaagagtgaacaaaaat
atctccgagtttgaactggcgtgtaatatagttcctttgccagaagacatacctgataat
accaggcaaattggcacaggtattgcgctaagaggccactcgggtcccatacaagcagtg
agcgtcctttcgagggaagaaatagttctgtctgcgtcacacgacagcaccatgcgagct
tggagagtgtccgactactcttgcgcctccgtttatagaggccacaactatcctatttgg
tgtttagacgtgtcgaagaatggattgtttatcgtaacggggtcgcacgacagaactgca
aaactctggtctctggatcgcaccttcccaatacgtgtttttgtcggacatgtgtctgat
gttacctgtgtgaagttccaccctaatgaagcgtacatagcaacgggcggcgccgatcgc
acggtgcgtctatggtcagtgtgcgaggcgcgactcgtgcgggtgctgtgtggacatcgt
gaacaactgcgctccctggccttctgtcccacgggcacactgctggccagcgccggcgat
gacaaaaaaattaagatatgggatctcacagcatgtacttgtatacatgaatacagagga
cactacggaaaagtcacatcactggactggtctgcggtgggaaaacccagcttaaccaac
agaatctcttcaaacgtgaacgacatgacgtcggacagttcaattctatgctcagcaggc
atggatggcattgtcaaagttgtgtgggatagtcaatttaagaataagtcaagctcaaat
caagaaaatacatctacatataatacgaagtgttcttacctagtagatattcaagtgcat
ccagactggatggtagcgatagggactaaaaagtaa
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