Leptidea sinapis (Wood White): 126966846
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Entry
126966846 CDS
T09272
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126966846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126966846
03036 Chromosome and associated proteins [BR:
lsin03036
]
126966846
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126966846
Coactivators
SAGA/TFTC/STAGA complex
126966846
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126966846
STAGA complex
126966846
TFTC complex
126966846
SAGA complex
126966846
SLIK complex
126966846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_Prp19
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TFIID_NTD2
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Aladin
DSE1_N
Beta-prop_SPT8
WD40_RFWD3
CFAP251_N
Beta-prop_IFT140_1st
ASA1
TRM82_WD
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_HPS5
Ge1_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
126966846
NCBI-ProteinID:
XP_050667066
LinkDB
All DBs
Position
11:10246991..10273769
Genome browser
AA seq
651 aa
AA seq
DB search
MKRNKNDAIKAAVVSYLERRNYPDVDVFNTSKSVSRSAEEMAVATIVQSESSRANSILFS
CINNDPGQYDIQYSRLFNFIKDIKVEKIKNELLGLVTPLLCHLYLEMLRGGHGGPAQMFL
KRHSATLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLDD
IGTVYTLQEIESRPTIAAFRSCKFDICLSQESVNTLKGYLAKNGHVLLIQVLQTWFHIDG
NGESKKKDDDEDDDTGVDFKDKVNSFEANLTNTNDIFSKCNGHTEFESADKELKDLQDAI
KGVRESLAPIKLYKIAAPDTNLVCAKTDQFCNMLCAGFTNSEVRLWDLGQNNVNRRVNKN
ISEFELACNIVPLPEDIPDNTRQIGTGIALRGHSGPIQAVSVLSREEIVLSASHDSTMRA
WRVSDYSCASVYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPIRVFVGHVSD
VTCVKFHPNEAYIATGGADRTVRLWSVCEARLVRVLCGHREQLRSLAFCPTGTLLASAGD
DKKIKIWDLTACTCIHEYRGHYGKVTSLDWSAVGKPSLTNRISSNVNDMTSDSSILCSAG
MDGIVKVVWDSQFKNKSSSNQENTSTYNTKCSYLVDIQVHPDWMVAIGTKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaacaaaaatgatgccattaaagcagccgttgtatcctacctagagcgccga
aattatccggatgtcgatgtattcaataccagtaaatccgtaagccgtagtgccgaggaa
atggcagttgctaccattgttcagagtgagtccagtagagcaaactctatattattttcc
tgtataaacaatgacccagggcagtatgacatacaatattcaaggctattcaatttcata
aaagatatcaaggtagaaaaaataaaaaatgaactcctaggattggtaaccccattatta
tgccatctttatttggaaatgttaagaggtgggcatggtggccccgcccaaatgtttctg
aaaaggcactctgcaacactaccacaaaaagatttatcatatcatcaacctatagatggg
aatctaccgtctgccctataccggcctaatagcttagagcagttatttaattctctacag
aatggtacgattgataatgagactccagaaaaagattacatgaatcagttgctagatgat
attggaacagtatacacactccaggaaattgaatctcgtccaactattgcagcttttcga
tcctgtaaatttgacatatgcttatctcaagaatctgtgaacacacttaaaggatatcta
gcaaaaaatggccatgtattactgatacaagttttgcagacatggtttcatatcgatgga
aatggagaaagtaagaaaaaagatgatgatgaggatgatgacacaggagttgactttaaa
gacaaggtcaatagttttgaagcaaatcttactaatactaatgatatattttccaaatgc
aacggacacacggagtttgagtcagctgataaagagttaaaggatctgcaagatgcaatc
aagggtgtgcgagaatcattagctccaatcaaattatataaaatagcagcacccgataca
aacttagtatgtgcaaagaccgatcagttttgcaatatgctgtgtgctggcttcacaaat
tctgaagtcaggctgtgggatcttggacagaataatgtaaacagaagagtgaacaaaaat
atctccgagtttgaactggcgtgtaatatagttcctttgccagaagacatacctgataat
accaggcaaattggcacaggtattgcgctaagaggccactcgggtcccatacaagcagtg
agcgtcctttcgagggaagaaatagttctgtctgcgtcacacgacagcaccatgcgagct
tggagagtgtccgactactcttgcgcctccgtttatagaggccacaactatcctatttgg
tgtttagacgtgtcgaagaatggattgtttatcgtaacggggtcgcacgacagaactgca
aaactctggtctctggatcgcaccttcccaatacgtgtttttgtcggacatgtgtctgat
gttacctgtgtgaagttccaccctaatgaagcgtacatagcaacgggcggcgccgatcgc
acggtgcgtctatggtcagtgtgcgaggcgcgactcgtgcgggtgctgtgtggacatcgt
gaacaactgcgctccctggccttctgtcccacgggcacactgctggccagcgccggcgat
gacaaaaaaattaagatatgggatctcacagcatgtacttgtatacatgaatacagagga
cactacggaaaagtcacatcactggactggtctgcggtgggaaaacccagcttaaccaac
agaatctcttcaaacgtgaacgacatgacgtcggacagttcaattctatgctcagcaggc
atggatggcattgtcaaagttgtgtgggatagtcaatttaagaataagtcaagctcaaat
caagaaaatacatctacatataatacgaagtgttcttacctagtagatattcaagtgcat
ccagactggatggtagcgatagggactaaaaagtaa
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