Leptidea sinapis (Wood White): 126967036
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Entry
126967036 CDS
T09272
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126967036
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126967036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
126967036
NCBI-ProteinID:
XP_050667302
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All DBs
Position
12:3092273..3173247
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AA seq
1353 aa
AA seq
DB search
MSKRGDNPPSDDDSDFDDDEDPDNLEVPGGGKTLAAAARLGDKVKMPAPAPVMIKPTTNP
LAAPSGLAFGQSSNVKPIRISASSLTKPINIGIGRGRGMPAMGMPGTSALNAVSLLAQME
MAGMQGLNPYWLQNLNQFLASGMGGPLAGMYGQLGQLGQLNQLAAWTNKGMWQQQEKMGG
EEEEVDDEEMGVAETYADYMPTKLKIGRKHPDPVVETASLSSVEPVDVTYKLALPEDTIR
SGALSALQLEAVVYTAQAHEHTLPDGTRAGFLIGDGAGVGKGRTIAGIIFENYMRNRRRA
IWVSVSNDLKYDAERDLRDIGANCIDVHSLSKFKYAKISSGVNSNVKKGVIFCTYSALIG
ETSANTKYRTRLKQLLQWCGEDFDGLIVFDECHKAKNLCPVGSGKATKTGLTALELQTKL
PRARVVYASATGASEPRNMAYMVRLGIWGDGTPFPTFMDFINAVEKRGVGAMEIVAMDMK
MRGMYIARQLSFHGVSFKIEEVPLSDSFKDTYDKAVALWVEAMQRFTEAAELIDAEARMK
KTMWGQFWSAHQRFFKYLCIAAKVNHAVVTAREAVKCGKCVVIGLQSTGEARTLEQLERD
DGELNDFVSTAKGVFQTLVEKHFPAPDRERINRLLGIEPKARQSPAASNGNATRATAAPV
PASNGDDDANTSKRKLTSRQQANVAAKRARGGSSSDEFVRGSDDDIEEPESDEDRPHSDS
DLSDFNPFRAGSDSDDDPWVGLGRKKKQTKKKKLSTPKKKVSTQDKIETMFEKKNTSPAS
TVTVTTPGGHNLTGTPVGTNGLYLGGARKQPPPRSAIERACSMKEELLASIERLARRLPP
NTLDQLVDELGGTDNVAEMTGRKGRVVQTEDGQIVYESRAEADIPLETLNLAEKKRFMDG
EKDVAIISEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPE
YIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRTALEAVMK
AIMKYETPLVAPPKDYRGDFFQDLASALVGVGLIINSEHQPGVLALDKDYNNMSKFLNRI
LGMPVELQNRLFKYFTDTLAAVMEQAKRSGRFDLGILDLGSAGECVRRVRCVRFLRRHAT
GTAPVELHTVCCERGLDWLDALEKSEECVGAEGFYLSQQARNGKYTAVLCIAANTTRERN
VPDKDRTYQLYRPNTGLQLRVETLGEIEKKYRKVTSDEAESAWRAQHSASQRVCSHAYWK
SVCRNGAECEVGLRVRTYHVLSGSVLAVWARVEAALAARSAAHKMQVVRLKTDDGRKIVG
TLIPKNCVDSLKETLSSDAVSVTEHKFDNIDLK
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtggagataatccaccaagtgatgacgattctgattttgatgatgatgaa
gaccctgacaacttggaagttccaggtggaggtaagacattggcagcagcagcaaggctt
ggagataaagtgaagatgccggctcctgcaccggtcatgatcaaacccacaacaaatcca
cttgcagcaccatctggattagcatttggacaatcatcaaatgttaagccaatcagaata
tcagcgagctcattgactaaacctatcaatattggtattgggagaggcaggggaatgcca
gcaatggggatgcctggcacttcggccctcaatgcggtgtcgctgcttgcacagatggaa
atggcgggaatgcaaggtttgaatccgtactggctacagaatctcaatcagttcctggcg
tcgggtatgggaggcccgctagctggcatgtatggtcagttgggacaactgggacagctg
aaccagttggcagcctggacgaacaagggaatgtggcagcaacaggagaagatgggcggc
gaggaggaggaagtggatgatgaggaaatgggcgtggccgagacgtacgctgactacatg
cccactaagctgaagattggccgcaagcacccggacccggtggtggagacggcgtcgctg
tcgtcggtggagccggtggacgtgacgtacaagctggcgctgcccgaggacacgatccgc
tcgggcgccttgtccgcgctgcagctggaggccgtcgtgtacacggcgcaggcgcacgag
cacacgctgcccgacggcacgcgcgccggcttcctgattggagacggcgcgggcgtgggc
aagggccgcacaatcgcaggcatcatcttcgagaattacatgcgaaaccgacgtcgcgcc
atctgggtgtcggtctccaacgacctcaagtacgatgccgagcgtgacctgcgggatatc
ggcgccaactgcatcgacgtgcactcgctgagtaagtttaaatacgcgaagatatcgagc
ggtgtcaatagtaacgtgaagaagggcgtgatattctgcacatactctgcgctgattggt
gagacgtccgccaataccaagtatcgcactcgtctcaagcaactgttgcagtggtgcggc
gaggacttcgatggactcatcgtgttcgacgagtgccacaaggccaagaacttgtgcccg
gtggggtcgggcaaggccaccaagacggggctgacggcgctggagctgcagaccaagttg
ccgcgcgcgcgggtcgtgtacgcgtccgccacgggcgcgtccgagccgcgcaacatggcc
tacatggtgcggctgggcatctggggcgacggcacgcccttccccaccttcatggacttc
atcaacgccgtggagaagagaggcgtgggtgccatggagattgtggcgatggacatgaag
atgcgtggcatgtacattgcccgccagctcagcttccacggagtctcgttcaagatcgaa
gaggtgcccctcagcgactccttcaaggatacctacgacaaggccgtggccctgtgggtg
gaagctatgcagcgtttcaccgaggcggccgaactcatagacgctgaggcccggatgaag
aagaccatgtggggacagttctggtcggctcaccaacgcttcttcaagtacctctgcatt
gcagcgaaggtgaatcacgcggtggtgactgcccgcgaggctgtgaagtgcggcaaatgt
gtcgtgatcggtctgcagtcgacgggggaggcgcgcacactggagcagctcgagcgggat
gacggcgagctcaacgactttgtgtctaccgccaagggcgtttttcaaacactggtggag
aagcacttccccgctccggaccgcgagcgtatcaaccgcctgctgggaatcgaacccaag
gccaggcagagtccggccgctagtaacggtaacgcgacccgtgccactgcggctcccgta
cccgcaagcaacggcgacgatgacgccaacacgtccaagagaaaactgacgtcacggcag
caagcgaacgtagcagcaaaacgcgctcgcggcggttcctcgagcgacgagtttgtccgc
ggctcggacgatgacatcgaggagcccgaatccgatgaggaccggccacactcggactcc
gacttgagtgacttcaacccgttccgcgctggcagcgacagcgatgatgatccatgggtc
ggtctggggcgtaaaaagaaacagacgaaaaagaagaaactttcgacaccaaaaaagaaa
gtttccacacaggataagatcgagacaatgttcgaaaagaagaatacctcgccagccagc
acggtcaccgtgacaacgcccggtggccacaatttgaccggcacgcccgtcggcaccaac
ggactctatctgggcggcgcgcggaagcagcctccgccgcggtcggccatcgagcgcgcc
tgcagcatgaaggaggagctgctggccagcatcgagcggctggcgcggcgcctgccgccc
aacacgctggaccagctggtggacgagctggggggcaccgacaacgtggccgagatgacg
ggtcggaaaggtcgcgtggtacaaacggaagacggtcagatagtgtacgagagccgtgcc
gaggccgatattccgttggaaacactcaatttggcggagaagaagcgcttcatggacggc
gagaaagatgtcgccatcatatccgaggcggcatcgagtggtatctcgctgcagagtgac
aggagagcgcgcaatcagaggcggagggttcacattacgttggagctgccatggtctgcg
gacagggcgatacaacagtttggtcgcacgcacagatccaaccaagtgaacgcgcccgaa
tacatcttcctaatttccgacctggccggtgagcgccggttcgcgtccacggtcgccaag
cggctggagtctctaggagcgctcacgcacggcgaccggcgcgcgaccgagactcgtgac
ctcagccagttcaacatcgacaacaaatacggtcgcaccgcgctcgaggcggtgatgaag
gccatcatgaaatacgagacgccgctggtggcgccgcccaaggactaccgcggcgacttc
ttccaggacctggcgtccgcgctcgtcggcgtggggctcatcatcaacagcgagcatcag
cccggcgtgctggcgctagacaaggattacaacaacatgtcaaaattcctgaacaggata
ctgggcatgccggtggaactgcagaacaggctgttcaaatacttcaccgacacactggct
gctgttatggaacaagccaagcgcagcggccgctttgacctcggcatcctggacctgggc
agcgcgggcgagtgcgtgcgccgcgtgcgctgcgtgcgcttcctgcgccggcacgccacc
ggcacggcgcccgtcgagctgcacaccgtgtgctgcgagcgcggtctggactggctggat
gcattggaaaagagcgaagagtgtgtcggcgctgaggggttctacctttcgcagcaggcc
agaaatggcaagtacacggcggtgctgtgcattgctgccaacaccacgcgcgaacggaac
gtgcccgacaaggaccgcacctaccagctgtacaggccaaacacgggtctacagctccgc
gtggagactcttggggaaatcgagaagaagtaccgcaaggtgacgagcgatgaagcggag
agcgcatggcgcgcgcagcattctgcttcccagcgtgtctgctcacacgcctactggaaa
tccgtgtgccggaacggtgccgaatgcgaggtgggcctgcgcgtgcgcacgtaccacgtg
ctgtcggggtcggtgctggccgtgtgggcccgcgtggaggcggcgctggcggctcgctcg
gccgcgcacaagatgcaggtggtgcggctgaagacggacgacggccgcaagatagtgggt
acgcttataccaaagaattgtgtcgactcactgaaggaaacgctctcttccgacgcagtg
tccgtcacagagcacaagttcgacaacatagacttaaagtga
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