Leptidea sinapis (Wood White): 126967038
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Entry
126967038 CDS
T09272
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03082
ATP-dependent chromatin remodeling
lsin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126967038
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126967038
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsin01009
]
126967038
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126967038
03036 Chromosome and associated proteins [BR:
lsin03036
]
126967038
Protein phosphatases and associated proteins [BR:
lsin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126967038
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126967038
SWI/SNF complex
126967038
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126967038
PBAF complex
126967038
SWI/SNF complex
126967038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
126967038
NCBI-ProteinID:
XP_050667305
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All DBs
Position
1:11474128..11483204
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AA seq
399 aa
AA seq
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MALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMSRRTLTNEERKRLV
DNGLGPHVLSSSVSLLKASEVEDIIEGNDEKYKAISVSQELATPREGKTKKPHNPSWLPV
MPNSSHLDAVPQATPISRTRVHNKKVRTFPLCFDDTDMSSMLENASQKQILVPIRLDMEI
EGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTSTFIPAIASSIRQQIEAYPSEPPAL
LEEQTDQRVIIKLNIHVGNTSLVDTIEWDMSEKENNPEQFAMKLCAELGLGGEFVTGIAY
SIRGQLSWHLRTYGFNEALPTVETPYRQPSDAEIWAPHLETLTNAEMEKKIRDQDRNTRR
MRRLANTTPDVSLSRAVNRLIRADEVLFPTTPEKRRKKI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcggacgtacggcgataagccgataagttttcaaattgaagaaggtggagat
ttttactgtgttggatcagaggtgggtaactatttacgtctattccgtggatctttatac
aagaaataccctggcatgtccaggaggacactcacaaatgaagaacgaaaacgattagtt
gataatggcttaggtccccatgtcttgtctagctccgtgtctctcttgaaggcttctgaa
gtcgaagacattattgaaggcaatgatgagaagtataaggcaatttcagtaagtcaagag
ctggcaacacctagagaaggtaaaacaaagaagccacataatccatcatggctgccagtg
atgccaaactcctctcacttagatgctgtaccacaagcaacaccaataagcagaacaaga
gttcataataaaaaggtgcgcacttttccactgtgttttgatgacactgatatgagttca
atgctggagaatgcctcacagaagcaaattttggtaccaattagacttgatatggagata
gaaggacaaaaactgagggatacattcacatggaacaaaaatgaatcaattataaccccg
gagcagttcgccgaagtattatgtgatgacttggaactaaatactagtacattcatcccg
gcgattgcgtcgtcgatccgacagcaaattgaggcatacccaagtgaacctcccgccctt
ttggaagaacaaactgaccagagagttatcattaaacttaatatacatgttggaaacaca
tctcttgtagacacgattgaatgggatatgtctgagaaagaaaataaccctgagcagttt
gcaatgaaactatgtgctgaactaggcctgggtggagagtttgtgaccgggatagcatac
agtatcagaggtcaactgagctggcatctgcgtacatatgggttcaatgaggctctaccc
actgtagagacgccgtaccgccaaccgtcggatgccgagatctgggctccacacctggag
accctcacgaatgctgagatggagaagaagattcgagaccaagacagaaacacgaggaga
atgagacgcttggctaacactactcctgatgtatctctgagtcgcgctgtcaaccgactc
atcagagcagatgaagtgttgttcccgactacgccggagaagaggaggaagaaaatataa
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