Leptidea sinapis (Wood White): 126967436
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Entry
126967436 CDS
T09272
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsin03016
]
126967436
Transfer RNA biogenesis [BR:
lsin03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
126967436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_8
TPR_2
TPR_1
TPR_GEMI5
SopA
Motif
Other DBs
NCBI-GeneID:
126967436
NCBI-ProteinID:
XP_050667854
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Position
13:5560745..5584774
Genome browser
AA seq
1274 aa
AA seq
DB search
MRNLQVLQITSRKLLAEDISCACYGLQGICTPGHLFLCTDRLLVRCFDHDGAVKWSKNLF
EVTSLQNKPIHIQYLSLVDTLIVALTSGDIYGITGNGADCELKGICEEGLLAMEWSHDQE
VFVLVTKGYQAIIMSCTYDIINIVDLLSQEFGANEFITVGWGKKETQFHGSEGKQAAQVK
SEFIVDKHAIVKDKVLISWKYHGNMFAVGFTMDGVRRFKVFDKSGRLQYTSEKVPGLEST
LAWKPNGNFIATTQRFSNKYVVAFFEKNGLRHREFELPNDENIEVENILWSQDSDILTLV
CNDLKDKSTKVFLYTTCNYHWYLKQVLTFSWPSKICKIMWDNDFDKLYSKKLHILFKNGK
YYEYFWIWDVNHSAGKCKSDDGVVAVIDGKKLLLSSFRHSTVPPPMANFEIEINEFINAV
YFLNEPKFGKDFNSFFICAANKLIFYEQIKKKPLKYILVKVCELQRFEFPLQSYNWYWWK
KDTLICVELDKNNTYNLIEYFLYDNHIVLCDNGIEKVNNICMPNAALRLHSHPTIPKVYI
HLITGNIMEYSCKQLNMAKDSFPTACSKFYVLMIGELVYFIGLTHKGVLYLQDKAIMNSV
SSIFIHTDYFLITSFNSFLLCTKLTNEGIDTLIEYDKKESPDVYKRKIERGAKIVVVVPN
STKTVFQLPRGNLEVIEPRPLSLKIVGENLDSQNYYEAFDLMRKQRINLNLIYDHNPELF
IQNIDLFLQSIQNNSWLSLFLTELENKDVTKTMYASNYADNNVNKQSENKINYICDIIRD
KLNQSTEKNSKILPILTTYVKKNTINDLENALLVIKDLKAQELDGLKLPVSSDEALKYLL
YIVDVNKLFDVALGMYDFDLVLLVANKSQKDPKEYIPMLNELNSMQENYRRYTINKNLKR
YDKAVESLIQCGPNKHEELKTFVKYHSLYKDAIRLLPKDDKVYKEICDDFGAFLKLKKHY
LEAGVMFERADNINKAVECYKEALEWEPAIKLAQYIPRDEFKVICWDFVHLLKEEKRHKE
AIRILEVLNDDETQLINYAVENCEFKSAIRFCLAYDMQHYLESDVLPALLEEYSSVKEII
QTNAETFKRQKERLEVVRKNKLKGLTGRPKVTYHDRDDDLYSDFGSTIGSSTGSSRSHRS
SKNRRKHERKVASLKEGSQYEDVALVIALHSLVTASFNLRSYVREINVALISMYKDEEAR
LLQFLLDSLLREMKEGFNQIWTHNFLIEATKAVVSAEENASDGGSVIRQGIATLAPHLRI
APVIEEIRWKLDID
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatttacaagttttgcaaatcacatccaggaaacttttagctgaagatataagt
tgcgcatgctatggactgcaagggatatgcacaccaggtcatttgtttttgtgtacagat
aggcttcttgttcgatgctttgaccacgacggtgcggtaaaatggtccaaaaatttattt
gaagtaacttctctgcaaaataaacccattcatattcaatacctgagcttagtagatacg
ttaattgtggcacttacgagtggagacatttatggtataaccggaaatggagctgactgt
gagctaaaaggcatttgcgaagaaggattattggcaatggaatggagtcatgatcaagaa
gtcttcgtattggttaccaaaggctatcaagctataataatgtcatgtacctatgatatt
attaatatagttgacttgttgtcacaagagtttggagccaatgaatttataacagtgggc
tggggtaaaaaggagacacagtttcatggttctgagggaaaacaggcagctcaggtcaaa
agtgaattcattgttgataaacatgcaattgtaaaagacaaggttctgatttcatggaaa
tatcatggcaatatgtttgctgtgggtttcacgatggatggtgtacgacggtttaaagtg
ttcgataaaagtggaaggcttcaatatacaagtgagaaagtgccaggattggagtcgact
ctggcatggaaacctaatggaaatttcattgctactactcagaggttttctaacaaatat
gtcgtagcatttttcgaaaagaatggcttaaggcacagggagtttgagttacccaatgat
gaaaatatagaagtcgaaaatatcttatggtctcaagattcagatattttaactttagtg
tgcaacgatttaaaggacaaatcaacaaaagtgtttctttataccacatgcaattatcat
tggtatctcaagcaggtattaacattttcttggccttctaagatttgcaaaattatgtgg
gacaatgattttgacaaattatatagtaaaaagttgcatatactattcaaaaatggcaaa
tattatgaatatttttggatttgggatgttaatcacagtgctggtaaatgtaaaagtgat
gacggagttgttgctgttattgatgggaagaaacttctattatcatcttttagacattct
acagtaccacccccaatggctaatttcgaaattgaaataaatgaattcattaatgctgta
tattttttaaatgaacctaaattcggtaaagactttaattctttttttatatgtgcagcc
aataaattaatattttatgaacaaattaaaaaaaaaccacttaagtatattcttgtgaaa
gtatgtgagttacaaaggtttgagtttccattacaatcgtacaattggtattggtggaag
aaggacactttaatatgtgttgaacttgataaaaataatacctacaatttaattgagtac
ttcttatatgataaccatattgtattatgtgataacggtattgagaaagtaaataatata
tgtatgccgaacgcagctttaaggctacattcacatccaacaatacctaaagtatatatc
catctgatcactggtaacataatggaatacagttgtaaacaattaaacatggcaaaggat
tcattcccaacagcatgctctaaattttatgtgttgatgattggagaacttgtttatttc
ataggtctaacacacaaaggagttctttaccttcaagataaagcaatcatgaacagtgtc
agttctattttcatacacactgattattttttgataacttcattcaacagctttttgtta
tgcacaaaacttaccaatgagggtattgatactctcatagaatatgataaaaaagaatca
ccagatgtttacaaaaggaaaatagaaaggggagcaaaaatagttgttgtagtaccaaat
agtactaaaacagttttccaattgccaagaggaaatttagaagtcattgaaccaagacca
ttatcacttaagattgtaggtgaaaatttggactcacaaaattattatgaagcctttgat
ttgatgagaaaacagagaattaatttgaatttgatatatgatcacaatcctgagcttttc
attcaaaatattgatctattcttacaatcaatacaaaataactcatggcttagtcttttt
ttgacggaattggaaaataaagatgttactaaaacaatgtacgcaagtaattatgctgat
aacaatgttaacaagcaaagtgaaaataaaattaattatatttgtgatattatcagagat
aaactaaaccaaagtacggaaaagaattcaaaaattttgccaatattgacaacatatgtg
aaaaagaatacaattaatgatttagagaatgctttgctggtaataaaagatctcaaagct
caagaactagatggtttgaaattaccagtatcttcagatgaagcattgaaatatctgttg
tacatagttgatgttaataaactttttgatgttgcactaggaatgtatgactttgatctt
gttttacttgtggctaacaaatctcagaaagatcctaaagaatatattccaatgttaaat
gaattgaatagtatgcaagagaattatagacgatatacaattaataagaatttaaagaga
tatgataaagctgttgaatcactaatacaatgtggtccaaataaacatgaggaattaaaa
acttttgttaaatatcacagcctttataaagatgcaataaggttgcttcccaaggacgat
aaggtttataaagaaatttgtgacgactttggggcattcttaaagcttaaaaagcattat
ttagaagccggagtaatgtttgaaagagcagataatattaataaagctgttgaatgttac
aaagaagctttagaatgggaaccagcaatcaagttggcacaatacattccaagagatgag
ttcaaggtcatttgttgggactttgttcatttacttaaggaagaaaagaggcacaaagaa
gcaatcaggattcttgaagtacttaatgatgatgaaactcaattaatcaactatgctgta
gagaattgtgaatttaaaagtgctatacgattttgcttggcatatgatatgcagcattac
ttagaatctgatgttctaccagcattgttagaagaatatagcagtgtaaaagaaatcata
caaacaaatgctgaaactttcaaaaggcaaaaggagcgtctggaggttgtgagaaagaat
aaacttaagggtcttaccggcagacccaaagtaacgtaccatgaccgtgatgatgactta
tattcggattttggcagtactattggatcatcaacaggctcaagtcgttctcaccgttca
agtaagaataggaggaagcacgaacgcaaggtagcatcgctgaaagaagggtctcagtat
gaagacgtggcgttggtgatcgctttacatagccttgtaacagcttcctttaacctgagg
agttatgtgagagagattaatgtggcccttatcagtatgtacaaggatgaagaggctaga
ttacttcagttcctcctcgatagtttactacgggaaatgaaggaaggtttcaatcagatc
tggacacacaatttcctaattgaagccactaaggctgttgtgagcgcggaggaaaacgct
tctgacggaggcagtgtcatacgacagggaattgcgactttagcgccacatctgagaatt
gctcctgtcattgaagaaattcgttggaaacttgatatagattaa
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