KEGG   Leptidea sinapis (Wood White): 126967573
Entry
126967573         CDS       T09272                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126967573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsin03019]
    126967573
Messenger RNA biogenesis [BR:lsin03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     126967573
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C NBCH_WD40 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Vps41 WD40_like RMC1_N WD40_RFWD3 Beta-prop_Nup120_160 Cytochrom_D1 WD_LRWD1 Beta-prop_DCAF4 Beta-prop_DCAF12 PEP5_VPS11_N KNTC1_N Beta-prop_RIG_1st Beta-prop_WDR75_2nd Nbas_N VPS8_N PROPPIN Beta-prop_VPS8 WDR54 Anti-LPS-SCYG
Other DBs
NCBI-GeneID: 126967573
NCBI-ProteinID: XP_050668060
LinkDB
Position
13:complement(5979791..5993872)
AA seq 330 aa
MSITTLYYLLLKKENAHEDSIWCCGWSNIKPEKKKQVENEEINEISQDSNPEEEQSESYI
ITGGLDDIIKVWQLNNGKLEVKHQLEGHSLGVISVAISPDGKTLASSSQDSSLILWDIAT
GEKLKTMETGATDVWTLDFSPDGKNVISGSNAGKILIFSVESGKQEQTLDTRGKFTLSVA
YSPDGKYIASGALDGIVKIFDVVQGKLVHTLEGHAKPIRSLCFSPDSQLLLTASDDGHMK
LYDVVHANLAGTLSGHASWVLSIAFSPDGKRFVSGSSDRTVRVWDLDTMQCQHVFKEHND
QVWGVKFNSESNKIVSVSEDKSINIYDCPL
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcaataactacactctattatttattattaaaaaaagaaaatgctcacgaagactcc
atatggtgttgcggatggagtaatataaagcctgaaaaaaagaaacaagtagaaaatgaa
gaaataaatgaaatttcacaagattcaaacccagaggaggagcaatcagaaagttacatt
ataacgggtggcttagatgatattatcaaagtatggcagttgaacaatgggaagcttgaa
gtcaagcatcaacttgaaggacattctttgggtgtaatatcagttgcaattagtccagat
ggaaaaactttagctagcagctcacaagattcatctctgatactctgggatatagcaaca
ggtgaaaagttaaagacaatggaaactggagcaacagatgtatggacacttgatttctct
ccagatggtaaaaatgtaatttcaggaagtaacgctggaaaaattttgatctttagtgtt
gagagtggaaagcaagagcaaacattggatactagaggaaagtttactttaagtgttgct
tatagtccagatggaaaatacatagcaagtggtgcattagatggaattgtaaaaattttt
gatgtagtccaaggaaaattagtgcacactttagaagggcacgccaaacctattagaagc
ctctgtttctcaccagactcacagttattattaacagcatctgatgacggacatatgaaa
ttgtatgatgttgtacatgcaaatttagctgggactctatccggtcatgcttcttgggtc
ctatctattgcattttctcctgatggcaaaaggtttgtgtcaggcagctctgataggaca
gttcgggtttgggatctggacacaatgcaatgccaacatgtttttaaagaacataatgat
caagtatggggtgtgaaattcaattctgaaagcaataagattgtttctgtgtcagaggac
aaaagtatcaacatatatgattgtccgttatag

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