Leptidea sinapis (Wood White): 126967753
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Entry
126967753 CDS
T09272
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126967753
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsin02000
]
126967753
Transporters [BR:
lsin02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
126967753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
MMR_HSR1
Imm_superinfect
Motif
Other DBs
NCBI-GeneID:
126967753
NCBI-ProteinID:
XP_050668382
LinkDB
All DBs
Position
13:complement(3323924..3401548)
Genome browser
AA seq
1845 aa
AA seq
DB search
MSNPNGVLGSVRGDGRHSPASTEQLTKCEKEPDCVAVGSRLRGAMGTRPPAAFWPQLWAT
VVRNLLLKKRDTRKTLAEVLVPLYSLGVLIFLKMLVPNPNFPEVRNPGRIMRIHHDAFSV
SNNIAVVADWNNNNGTMSFLEDVNAMLTESGLYPITWIKYNDTDELDDAYHSDAKSFPIA
VIFHSDPKASGEPLRYTIRTNPSTDGGTPSTRILTTSPAKCRDRTNTDWSTDWSRGGQLI
PLSEMHREDTCPVLQYYYTGFLSLQSLLDYVKIKLDTGTQFRPPRVDLMQFPKAQHTGDW
LVIFRVIMPMYMVMTLSQFITYLLMLVVGEKEKKIREGMRIMGLKDSVYWGSWFLIYAVF
VTLLSVVSTVLLFTLKVFQHSSYILIFLLMLLFGFTIITFAFMLTPFFDKARTAGILGSF
AVNLMSGLYFIQVFVSNADSLAFWFLSLISSSCYALAMDKALVLDMAGVGVTWDNLWSGP
GVPFGGSLIMMAIDTVIYALAAYWLDAVVPSEYGIKQKPWFCLLPSFWCGSRRGRVSAVH
FHSNGDSAHNKDIEPVPKELQDKEAIRIVGLQKTFRHCRKPEIKAIDGIDLSIYEGQITA
VLGHNGAGKSTLFNILTGLTAPTAGTAYVYGLDVRDPNDMHEIRQMIGVCPQQDVLFDLL
SVKEHLKFFAAIKGIPRKRIDDEVHKAASEVSLLDHMDSFSKHLSGGQKRRLSIAIAFIG
DPKIIILDEPTAGVDPVSRRKTWRILQRAKRGRVLLLTTHFMDEADILGDRKAVISKGRV
RCAGTSLFLKNKFGIGYHLTLVLDGACRENQITRLVRGHVGRAEKARRHGRELSYILPHY
SVHLFPPLFHAIEKEIREKTNRLGITSYGVSMTTLEEVFLSLEGENADEMDAVEGVSSVK
LVRARALSRSLSLQSKTLSYQELNDKELQKSASLTPPASHALHSTNHGVELVKVTPDLPV
SVETLGEILKTNPSCWRTFCALVYIRTVRMIRDPYKLYVMIFMPIISCALGLYIKSRQIV
FFRMQPLKLDPNVYVNRTPIALHAEQDNFQLVDDFRNSIESLGANPTGFFDGNFSSLLDM
ENFGAFSLKESRNPYGNILAYYNSTLTHSLPIIINLLDNSIYRVLMSASGQLEKFRPIEV
LTHPFQQTEQPEEFNLGSVVCAIFMGMIFALVPVTLAVDIVYDREIKAKNQLRVNGLSMT
MYFITYFTILIFIMIITSIGVLILVIINDIPSLTNGSAITMLTGLLMLYSPSAILFNTCL
SYIFDKMDSAQSIMPNITTWVGVIPFVMVACLDTFKWGSEIAFYLHTLFSFLDVMYIPYA
IIYYVDRVYLTCNLSGLCTVPALSSYFTAEVWVLIGAMVVHVPLCGIVLLAADRVKSGGR
ICPRKKSETDKCLEAESDAGGEVGEDDDVRRERRRVVTLLQESQQQQRSPPPALLVHNLR
KEYKVRSSEGSWCGENEGGKRAALARLSLAVQGGEVFGLLGHNGAGKTTTMKIITAEERL
TCGTVMLGGKNIEEAQSSAFQMLGYCPQHDALWKNVTIREHIECYAAIRGISKADTPRIV
DAYLNGLQIMEHASKNADECSGGTRRKLSFALAMVGCPRVVLLDEPSTGMDPRSKRFLWD
TILASFQGKKGAILTTHSMEEADALCSRVGIMVKGGLRCIGSTQHLKNLYGAGYTLEMKI
GENSHKSAMIESELSMSPSPLRSGVNSPSLGEADEGSGGGSVTAEVEVEGETETVDVNIN
TPLVGNATTTRHHHQRTESSGGANSDAAIALVTQIFPAAVLEESFAERLVFSVPQHSVSS
LATCFQQIEAAKEKLNILEYSFSQTTLEQVFLKFAQSENVDSSDQ
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcctaatggcgtcctcggcagtgtgcggggtgatggaagacattcaccggcc
agcaccgaacagctaacgaaatgcgagaaggaaccagattgcgtcgcggtaggtagcagg
ctgcggggagctatgggtacgagacctcctgctgctttctggccacagctctgggctact
gtggtcaggaacctgctcctcaagaaacgcgacaccagaaaaaccctcgctgaagtgctg
gttcctctctattcacttggagtcctcatcttcctcaagatgctagtcccgaacccgaac
ttccccgaagtacggaacccagggcgtatcatgagaatacatcacgacgcgttctccgtt
agtaacaacattgctgtggttgctgactggaataacaataatggcacaatgagtttcctg
gaagatgtgaacgcaatgttaactgaatctggcctttacccgataacctggattaaatac
aatgacactgacgagttggatgacgcgtaccacagcgatgccaaaagctttccaattgct
gtcatctttcattccgaccccaaggcatccggagagcctctcaggtacaccatccgaaca
aacccttcaacagacggcggaaccccttcaactcgcatcttaacaacatccccagctaag
tgcagagatcgcaccaacacggattggtccacagactggtccaggggtgggcaactcatc
ccactctcggaaatgcaccgagaagacacgtgtccagtgctgcaatattactatactggc
ttcttgtccttgcagagtctgctggactacgttaaaataaagctggacactggcacacaa
tttcggccacctcgcgtagatctaatgcagtttcccaaagcccaacataccggggattgg
ttggtgatcttccgggtgataatgcctatgtacatggtgatgactttgtcacagttcatc
acatacctgttgatgctggtggtaggcgagaaagagaagaagattagagaaggaatgagg
attatggggctgaaggattcagtatactggggctcatggtttttgatttacgctgtattt
gtgaccctcttatctgtggtcagtactgtcctgttgtttactttgaaggtctttcaacac
tcctcatacatcttgatattcctgctgatgctgctatttgggttcacaatcatcaccttt
gcgttcatgctgacacctttcttcgacaaagcgaggacggctggtatcctgggcagtttt
gctgtgaatctgatgagtggactgtacttcatccaggtgtttgtctccaacgctgactca
ctcgcattctggttcctatcgctcatcagttccagctgttatgctcttgcgatggacaag
gcgttagtcttagacatggctggtgtgggagttacctgggacaatctgtggagtggacct
ggagttccatttggaggcagtcttatcatgatggctattgacactgtcatctacgcgcta
gctgcctactggctggatgctgttgtgccaagtgaatacgggatcaagcagaagccatgg
ttctgtctcctaccatcgttctggtgtggcagtcgacgtggcagagtttctgctgtacat
ttccactccaacggtgattctgcgcataacaaggacatcgaacctgtgcccaaggaactc
caggacaaagaagccatcaggattgtgggcctccagaaaacctttcgtcattgccgtaag
cctgaaatcaaggccatcgatgggatagatctgagtatctatgagggtcaaattactgct
gttcttggacataatggtgctgggaagtccacgctattcaatatattaactggacttact
gcacccacggctggaactgcttatgtttatggcttagacgtcagagacccaaatgacatg
cacgaaatacgtcagatgataggcgtgtgtcctcagcaagatgtcctatttgatctgctt
tctgttaaagagcatttaaagttctttgcagctattaagggtattcctagaaagagaata
gacgatgaagttcacaaggcggcgtcagaagtgagcttattggaccatatggacagcttc
tcgaaacatctatcagggggtcagaagcgcagattgagtatagctatcgcgttcattggg
gatccgaagataattatcctggacgagccaacagctggggtagatccggtgtctaggagg
aaaacttggagaattctgcagagagcaaagcgagggagagttctattgttaacgactcac
tttatggacgaggctgatatccttggggatagaaaagccgttatcagcaaaggcagggtt
cgttgcgccggtacttcattatttctgaagaacaagtttggcatcggctaccatttgacg
ctcgtcttggatggtgcatgtcgtgagaaccagatcactcgtctagtgcgaggtcatgtc
ggccgtgcagagaaggcgcgacgacacggccgggagctttcttacatcctaccacactat
tcagtccatctcttcccccccctattccatgctatagaaaaggaaatacgggagaagacc
aatcgtctcggtattaccagctatggggtgtcaatgacaacgctagaggaagtgtttcta
agtctggaaggcgagaacgctgatgaaatggatgccgttgagggagtttcttcagtgaag
ctggtacgagcgagagctttatctagaagcctgtctctgcagagtaaaactctcagctat
caggagctaaatgataaagagttgcagaagagtgcttctctgaccccaccagcatcccac
gcgctgcattctaccaatcatggggtagaactggttaaggtaacaccagatttgccggtc
tctgtggaaacattaggagaaatcttgaaaacaaacccctcgtgctggcgtacattctgc
gcacttgtttatataaggacagtgcgtatgataagggacccttataaactttatgttatg
atatttatgcctataatctcttgtgctctgggtttgtatataaaatctcgtcaaatagta
ttttttcgaatgcaaccgttgaaactagatccaaacgtgtacgtcaacaggaccccaata
gctttacacgcagaacaggacaattttcaacttgttgatgactttagaaactcaatagag
agcttaggagcaaaccccacaggattttttgatggaaatttttcaagtttgttagatatg
gaaaattttggggcgtttagtttgaaagaaagcagaaacccctacggaaatatattggcc
tattacaatagtactctaacgcacagtttgccaattattattaatttattggacaatagc
atttacagggttttaatgtctgcgtctggacagttagaaaaatttaggcctatagaagtt
ttaacgcatccgttccaacaaacagaacagcctgaagagttcaatttaggaagtgttgtt
tgtgccatattcatgggaatgattttcgccctggtgcctgtaactttagctgtagacatt
gtgtatgatagagaaataaaagcaaagaaccagttacgtgtgaacggattatctatgact
atgtatttcattacatactttactattcttatattcattatgataattactagcattgga
gttttaatcctagttataatcaacgatattcccagcttaactaacggatccgcaatcaca
atgttaactggtctcttaatgttgtatagtccgtcagctatcctctttaacacctgtctg
tcttatatatttgacaagatggattcggcccaatcaataatgccgaatataacaacctgg
gttggggtcataccgtttgttatggtcgcatgtttggacacatttaaatggggtagcgag
atagctttttatctccacacgttgtttagtttcttagatgttatgtacataccatatgcg
ataatatattatgttgatagggtatacttaacgtgtaacctaagcgggctatgtacagtt
ccggctttgtccagttacttcactgcagaagtttgggtgttgattggagcaatggtggtg
catgtccctctttgtgggatagtactccttgctgccgatagagtgaagtctgggggaagg
atatgtccgcggaaaaagagcgaaacagacaagtgtttagaagccgagtctgatgccggt
ggtgaggtgggagaggatgatgacgtcaggagggaacgacgcagggtcgtgacgctgctc
caggagtcacaacagcagcagcggtcaccaccacctgccctgcttgtccacaatctccgg
aaagagtacaaagtacgcagttctgagggttcgtggtgtggagagaatgaagggggcaaa
agggctgccttggcgagactgtcgctggccgtgcaggggggagaggtgtttggcctgttg
gggcacaacggagctggcaaaaccaccacaatgaagattattactgctgaggagcggtta
acctgcggcacggtaatgttgggcggaaagaatatagaagaggcgcagtcgagtgctttc
cagatgttgggttactgtccacagcatgacgcgctatggaagaacgtcacaattcgggag
catatagagtgctacgcggcgatacgagggataagcaaagctgatacacccaggatcgta
gatgcgtacttaaacggcctacaaataatggagcacgccagtaaaaatgctgatgagtgt
tcgggtggaacacgacggaagctgtcgttcgcgctggccatggtcgggtgtccccgagtc
gtgttgctggatgagccctcgactggcatggaccccaggagtaaacggttcctctgggat
accatactggctagctttcagggaaagaaaggtgctattcttaccacacattccatggag
gaggctgatgctttgtgttcaagagtcggaattatggtcaagggaggtttgcggtgcatc
ggttcaacacaacacctgaagaatttgtatggagctggctacaccctggaaatgaaaatc
ggagaaaacagtcacaaatcagcgatgattgaaagcgagctctccatgtctccttctcca
ttgaggtctggtgtcaactcgccgtcgctgggagaagccgatgaaggttctggtggtggt
tcggtgacggctgaagtggaggtggagggagagactgaaactgtggacgtcaacataaat
actccacttgtgggcaacgctactacgacccggcatcatcatcaacgaacagagtcaagt
ggtggagctaactcggacgcagcaatagctctggtgacacaaatattcccagcggctgtt
ctagaagagagttttgcagaacgactcgtcttctctgtcccgcagcattctgtttccagt
ttagcaacttgttttcagcaaattgaagccgctaaagagaaactaaatatcctcgagtac
agtttcagtcaaaccacacttgaacaagtgttcttgaagtttgcacaaagcgaaaatgtt
gactcgtcggatcaatag
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integrated database retrieval system
