Leptidea sinapis (Wood White): 126967939
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Entry
126967939 CDS
T09272
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126967939
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
126967939
Condensin II
126967939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
MscS_porin
ATG16
DegS
ATG17_like
EzrA
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126967939
NCBI-ProteinID:
XP_050668602
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All DBs
Position
14:6721408..6757494
Genome browser
AA seq
1287 aa
AA seq
DB search
MPEPSKRQRVEEAMDVDENPTSENGGSSQNNGENSDVDHISDDEEGGMRIGDIYIPPAPK
PTLSFDTTGPRLIITHIVNENFKSYAGVQSLGPFHKSFTAIIGPNGSGKSNVIDSMLFVF
GYRASKIRTKKISVLLHSSSKFPNVNSASVAVHFCQIIDGEGDAYTVVPNSEIVVSRTAF
RDSTSFYTLNGRRVQFKEVARMLRSHGIDLDHNRFLILQGEVEQIAMMKPKAQTEHDTGM
LEYLEDITGTSRYKEPIEKLSVRVEEYSEMRKEKLNRVRLVEQEKQKLEQPMREAVDLMN
LTNTALRTRNMLLQKYIHETNKIIESKNKELDELKESLKQVDDKLAQVKQQLQDKSTELK
NGTQQYDEMQKRKDEIGDRLQSCKRTQVSVQADTTQANKKKNNLEDLLKTERGKLIELEM
VPERNEREIADCEVLLNKHKESKRQAEAELETLMAGVREQTRGFQEQKDRLQSKLIDLKK
IFSEADKNFKLAESELKIYLVTETKEQEKLDKMRDSFEKAEKDLDEKKVQRSILAKELPA
QEIELTRMQSRMQRLKSEEVTLEREARTLRKQLEESKQTMNANRSKGRVLDSLMREKQSG
RLPGIFGRLGDLGGIDATYDVAISTCCGALDNIVVDSVDTAQACVEFLRRNDVGRATFIA
LDKQQHLLRYCQNKTTYPENAPRLFDLVRVRDDRVLPAFYFALRDTLVARELEQAARVAY
GATRYRVVTIAGDVIEIAGTMSGGGRSVLRGRMSSSVQQDTSEIDPAALRENERKLDELT
ERLAEIRNEETTLEETVASLMNRCQEGKRTMSRLDFDLNTLMEQVPNLKKQIEEQEKRLS
SFKVDEAQKKRLEEKVKSAEEAREQAQYNAGEIEKEVSGVDAQIASVAGNKVKEMQKNVE
DLTKKIEKLSSEITKLRVAINTSKRNAKKSKDKISQMESDLADTLKNLESLGNQKKQLTL
DIGELQKNFGELDEQINEGTGQFAGLRKEITALQENEKNLKSERLEANNAVVKMEKTIKE
CSSKTPLWERELQSLRLEDPGIDIPGIERPTPLVRHSPEELEECSVEELRNRLSAQKARV
GEAKPNLQAIQDYRAKEEVYMRRAAELDDITNKRNEMRALFDQLRKKRTTDFLSGFNIIT
TKLKEMYQMITLGGDAELELVDSLDPFTEGIIFSVRPPSKSWKNISNLSGGEKTLASLAL
VFALHYYKPTPLYVMDEIDAALDFKNISIVANYIKERTKNAQFIIISLRYNMFEASNRLV
GIYKTQDCTKSVTIENKEPEDKVAVEC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaccaagtaagaggcaaagggtggaggaggcaatggatgtcgatgaaaatcct
acttccgaaaacggcgggagtagccaaaacaatggtgaaaatagtgatgtcgatcacata
tccgatgatgaagaaggtggtatgcgaatcggtgatatttatataccaccagctccaaaa
ccgacgttatcatttgatacaacaggaccgcgacttattatcactcacattgtcaatgaa
aattttaaaagctatgctggcgtacagagtttgggtccctttcacaagagcttcacagca
attattggtccaaatggaagtgggaagagtaatgttattgattctatgctctttgtattt
ggttaccgtgccagtaaaataaggactaagaaaatatctgttctgctgcattcatcaagc
aaatttcctaatgtgaacagtgcaagtgtggctgtacatttttgtcaaattattgatggg
gaaggcgatgcatatactgtggtaccgaacagcgagatcgttgtatcaaggacggcgttc
agagatagtacgtcattctacacgctaaacggccgacgtgtacagttcaaggaagtggca
agaatgctaaggtcgcatggaatcgatctagatcacaatcgattccttatattacagggt
gaagtggaacagatagcaatgatgaagccgaaagcacaaaccgaacacgacacggggatg
ctggagtatttagaagatatcactgggacgtcgcgatataaagaaccgatagagaagcta
tcagtacgcgtggaagagtacagcgagatgagaaaagagaaattgaatcgcgtgcgatta
gtcgaacaagagaaacagaagttggagcagccgatgagggaggcggttgatttaatgaac
ctgaccaacacggcgcttaggacgaggaatatgctgctgcagaaatatatacatgaaaca
aataagataatagaaagcaagaacaaggagttagacgaactgaaggagagcctcaagcaa
gttgatgataaactggcgcaagttaaacagcagcttcaagacaaatccaccgagctaaag
aatggcacacagcagtatgatgaaatgcagaaacgcaaagacgagataggtgacaggtta
cagtcgtgcaagcgaacgcaggtgtcagtacaagcagataccacgcaggcgaacaaaaag
aaaaacaatctggaggatttgctgaaaactgagaggggaaagctgatagaattggaaatg
gtaccagagcgaaatgaacgagagattgcagattgtgaggttttattgaacaaacataaa
gagagcaagcgacaagctgaagccgaattagaaaccttaatggctggagttagggaacaa
acacgtggtttccaagagcaaaaggacagattgcaatcaaagttgattgatttgaagaaa
atcttcagtgaagccgacaagaacttcaaacttgccgagtccgagctgaagatctacctt
gtaacggagaccaaggaacaagagaaactggacaaaatgagagacagttttgaaaaggct
gaaaaggacttggatgagaagaaagtgcaacgcagcattctagcaaaagaattaccggca
caagagatagaactcacgcggatgcagagtaggatgcagaggttgaagagcgaagaggtt
acattggaaagggaggcgagaactttgagaaagcagttagaagagtcgaagcagacaatg
aacgcgaacagatcaaagggcagggtattggattcgctgatgagggagaagcaatctgga
aggttgcccgggatatttggcagactgggcgacttggggggtatagatgcgacatatgac
gtcgcaatatcgacgtgttgcggcgcactcgacaacattgtggtggactcggtcgacacc
gcacaagcctgcgtggagttcctgagacgaaacgatgtcggacgagctaccttcatagca
ctcgacaaacaacagcacttgctcagatactgtcagaacaaaactacttatcccgagaac
gctccgcgactgttcgacctggtgcgcgtgcgcgacgaccgcgtgctgcccgcgttctac
ttcgcgctcagagacacgctcgtggctcgcgagctggagcaagcggcgcgagtggcgtac
ggcgcgaccaggtaccgagtggtcaccattgccggagacgtcattgaaatcgcaggaact
atgtccggcggaggcaggtcagtgctgcgcggacgaatgtcgagttccgtacaacaggac
acgagcgagattgacccggcggccctgcgggaaaacgaacggaaactagacgaactaaca
gaaagactggcagagatacgaaatgaagagacaacgttggaagaaaccgtagcgtcttta
atgaacagatgtcaggaagggaagcgaacgatgtcaaggttggactttgatctgaacact
ttgatggagcaagtacctaacttaaagaaacaaatagaagaacaagagaagagattgtcc
tcgtttaaagtggatgaggcccaaaagaaaagactggaggagaaagtgaaaagtgctgag
gaggcgcgggaacaggctcaatataatgccggggagattgaaaaagaggtgagcggcgtg
gacgcacaaatagcatctgtggccgggaacaaagtgaaagaaatgcagaaaaatgttgaa
gatttgacgaagaagattgagaaacttagcagcgagatcaccaaactacgagtcgcgatt
aatactagcaaacgaaacgcgaaaaagtccaaagacaaaatatcacagatggaaagcgac
ctcgcggacacgttgaagaacctggagagtctcggcaatcaaaagaaacagctaacgctt
gatattggtgagctgcagaagaactttggagagcttgatgaacaaataaatgaaggaacg
ggccagtttgcgggtctccgcaaagagataactgcattgcaggaaaatgaaaagaatttg
aagagtgaaagactcgaggcgaacaatgccgttgtcaaaatggagaaaacaataaaggag
tgttcgagcaaaactccgctgtgggagagagagcttcaatcactacgattagaggaccct
ggtatagacatcccgggaatcgaacgtccgactccattggtgcggcactcgcctgaagag
ctcgaggagtgtagcgtagaagagttgaggaaccgactgtccgcgcagaaggctcgagtc
ggtgaagccaagcccaatttacaagccattcaggactatagagctaaagaggaggtgtac
atgcgtcgtgcggcggagcttgacgatatcacgaacaaacggaacgagatgagggcgctg
ttcgatcagctgagaaaaaagaggaccacggactttctgagcggtttcaatataataacg
acaaagctgaaagagatgtatcagatgataacactgggcggtgacgcagagctggaactg
gtagactcgctcgacccttttaccgaggggatcatatttagtgttcgtccgccaagtaaa
tcgtggaagaacatatcgaatctgtccggcggagagaagacactggcgtcgctggcgctg
gtattcgcgcttcactactacaagcccacgccgctctacgtgatggacgaaatagacgcc
gcgctcgacttcaagaacatatccattgtggcaaactacattaaggaacgcacaaagaac
gctcaatttataattatatccctgcgatacaacatgttcgaggccagcaaccgtctggtc
gggatctacaagactcaggactgcactaagtcagtcactattgagaacaaagaaccggaa
gacaaagttgcagttgaatgttaa
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