Leptidea sinapis (Wood White): 126968054
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Entry
126968054 CDS
T09272
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126968054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126968054
03009 Ribosome biogenesis [BR:
lsin03009
]
126968054
03036 Chromosome and associated proteins [BR:
lsin03036
]
126968054
Enzymes [BR:
lsin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
126968054
Messenger RNA biogenesis [BR:
lsin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
126968054
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
90S particles
RNase
126968054
Prokaryotic type
rRNA processing factors
126968054
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
126968054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
126968054
NCBI-ProteinID:
XP_050668798
LinkDB
All DBs
Position
14:complement(2829742..2874518)
Genome browser
AA seq
1447 aa
AA seq
DB search
MSIPPQNFSFLPPQICVPSQTRAVVHSLHTQSSVYNYLPPPVPIVQSRNGLPSYYPTETL
PPMSFPPPNIPPTSHYVPPPYPPGPVQATTSYCYHGDPSYVNLTTSNSDNQYNVHSWNKD
KSYVVRSQSTDGKSNSWHSTDLSEAIQNMSKHEKHSTKSHYYDRELSRSQYSPSRESSRS
RYSPSRESSRSRYSPSRESSRSRYSPSRESSRSRYSPSRDSSRSRYSPARSSSRSWYSPT
REKYERERRDYRSTSDRSIRSPSYSSHNRVSRGRDERYYRERYHIEDRKEYERRKYYERS
SSHQYEKDYRSHSQRYTSRDDDQYIERHSSHRSRSPSRTSTGHKSMTDREKILDDYRRNY
CSTSEDFIRKMEKWSKEHKSDEEENTKMWYRSSPAELYYRSIDNGIGMEQTQKLEKVCEK
FFNTLIERGRKARPEVDELPPLKAQKAKRCKHNDDHSSSSSSSEDEDCLDEKNLQGYTDR
MMMELERKQSHPRRLHPELWYNNTGEMNAGPLCRCSAKARRHGIRHGVYADELHFPKCIP
NRSNIDKLYHYRITVSPPTNFLIKSPTIISHDEHEFLFSGFSMFSHYKLAKLPTCKVIRF
NIEYTILYVEEPTPQNFTIKELDLFEEFLFKEILELVDLDLGVGSETTCSQFHFMPRFVR
YLPDGGCEVLSMCEILKYLINESGLLIPPESLEKIHNMDHYHWQKYVDRIKGMIVTYPGK
KPCSVRVDQIDKSPPLHVTNYKDYKNYYPEIVHFGIRPPQLSYAGNPEYQKAWRYYVKYR
HLIANMAKPMYNDRQKLAAKEARLQEMRTQSKMKRDVTVAISSKGFHTTGLMCDVVQHAM
LIPVLVRHLRFHKSLERLEETIQYKFKQRALLQTALTHPSYRENFGTNPDHARNTLANCG
IRQPEYGDRRIHYTRKKGIVTLINIMSRFGKSNETESEIKHNERLEFLGDAVVEFISSIH
LFKMFPGLAEGGLATYRAAIVQNQHLALLAKNIGLDQYMLYAHGSDLCRDVVMRHAMANC
FEALMGALFLDAGLQVTDRVFAMALWHGDDTLYDVWMKERAHTLQDQEPLGDRQYIKDFE
FLRKLTEFEDSIGVKFKHIRLLARAFTDRSVGFTNLTLGSNQRLEFLGDTVLQLVVSDKL
YKHFPDHHEGHLSLLRSSLVNNRTQAMVCDDLNMSEYAIYNNPKAKPTAKKHKADLLEAF
LGALYIDKNLEYCQVFCSVCLFPRLQEFIMNQDWNDPKSKLQQCCLTLRSMQGGEPQIPF
YKVIECLGPTNTRLYTVGVYFRGKRLSSGRGHSIQEAEMNAAETALATAHELFPQLDHQK
RIIAKSMRRKRKKAKNIQGVDKSANDLFLRRDEVPKAYRPGTKLEQSSESDAELSDTEEP
KEKKSDDESDSKSGSDCDSGSGTDKFENVQVSSLVSDMERLKQDLINRNEYDKLKEKCKK
SDSDEEL
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgtctattccgccacaaaattttagctttctgccgcctcaaatatgtgttccatcacaa
acgcgtgcggtagttcattctttacatacacaatcatcagtttacaattatctgccacca
ccagttccgattgtccaatcaagaaatgggctgccttcttactatcccacggaaacattg
ccaccaatgagttttccaccccccaacattccacctacctctcactatgtaccaccgccc
tatcctcccggtcccgtacaagccactacaagttactgttatcatggagacccaagttat
gtaaacctgacaacatcaaacagtgataatcaatataatgtacacagttggaacaaagat
aaatcttatgttgtaagaagtcaatctacagacgggaaaagcaattcatggcacagtaca
gatttaagtgaagcaatccaaaatatgtcaaaacatgaaaagcattcaacaaagtcacac
tattatgatagagaattatcaagatctcaatatagcccaagtagagaatcatctagatct
agatatagcccaagtagagaatcatctagatctagatatagtccctctagagaatcttct
agatctagatatagcccctctagagaatcgtctagatctaggtatagcccctctagagat
tcatctaggtctagatatagccctgctagaagctcatcacgctcatggtatagtccaact
agagaaaaatatgaaagggagagaagagattacagaagtacatctgatagatctattcgc
agtccaagttacagtagccacaatagagtaagcagagggagagatgaaagatactaccga
gaaagataccacattgaagatagaaaggaatatgagcgtcggaagtattatgaaagaagt
agttcgcatcagtatgagaaagattatagaagtcatagccagagatatacatcaagggat
gatgatcaatatattgagaggcattcttctcatagaagcagatctccatccagaacttct
actggtcataaatcaatgactgatagagaaaaaatattagatgattataggaggaattac
tgctcaacatcagaagacttcataagaaaaatggaaaaatggtctaaggaacataaatct
gatgaggaagagaacacgaaaatgtggtatagaagttcaccagcagaattatattataga
tctatagataatggtattgggatggaacaaacacagaagttggagaaagtctgtgaaaag
tttttcaatactcttattgaaaggggcagaaaagcaagacctgaagttgatgaactaccc
ccccttaaagcacaaaaagctaagagatgtaaacataatgatgatcatagctcctcatca
tcatcttccgaggatgaagattgtttggatgaaaagaaccttcaaggatatactgacagg
atgatgatggagttagagagaaaacaaagtcatcctagacgattacacccggaactatgg
tacaataacactggggagatgaatgctggacctttgtgccggtgtagtgctaaagctcgt
cgtcatggtattcgtcatggggtgtatgcggatgagctgcattttcccaagtgtataccc
aacagaagtaatatagacaaactatatcactatcgaataacggtatcaccaccaactaac
ttcttgataaaatctccaactataataagccatgacgagcatgagtttctgttctccggg
ttctccatgttttcgcactacaagttggctaagttgcctacatgtaaagtaataaggttc
aatattgaatacacaatactgtatgtggaagagcccactccacagaattttactattaag
gagcttgatttatttgaggaatttctattcaaggagatattggaattggtcgatttagat
ttgggtgtaggatcggaaactacgtgctcacaattccattttatgccaagatttgttcga
tatcttcctgatggtggttgtgaggttttgtctatgtgtgaaatattgaagtatcttata
aatgaaagtggtctgctcataccgccagagtctctggaaaagattcataatatggaccac
taccattggcagaaatatgttgacaggatcaaaggtatgatagtcacatacccaggaaag
aagccatgttctgttcgagtggaccaaatagacaagtctccacccctccatgtgacaaac
tacaaagattataagaattattatcccgagattgttcactttggcattagaccaccacag
ctaagctatgcaggcaatcctgagtaccaaaaagcgtggcggtactacgtgaaataccgt
cacctgatcgccaatatggccaagcctatgtacaacgatcggcagaaattagcggcgaaa
gaggcgcgcctacaagagatgcgcacgcagagtaaaatgaaacgtgatgtcaccgtcgcc
atatcctcaaagggctttcataccacgggcctgatgtgtgacgtagtacagcacgccatg
ctgataccagttctagttcggcacctccgctttcacaaatcactggagagattggaagaa
acaatacaatataaattcaaacagcgtgcgttactacagactgctttgacgcatccttcg
tacagggagaacttcggtaccaatccggaccatgccaggaatacgcttgctaactgcggt
attagacagccggaatatggggacagaaggattcattacacgaggaagaaaggtatcgtg
acactgatcaacataatgtcgcgcttcggcaagagtaacgagactgagtcggagatcaaa
cataacgagcggctggagtttcttggagacgcggtggtggagttcatctcgtccatacat
ctgtttaagatgttcccagggctcgcagaaggtggcctggctacctaccgggctgccatc
gtgcagaaccagcatctcgctctgctggccaagaacataggtctagatcagtacatgcta
tacgcccacgggtcggacctgtgtcgtgacgtggtgatgcgacatgcgatggccaactgc
ttcgaggctcttatgggtgcgctcttcctcgacgccggcctacaggtgactgaccgcgtg
tttgctatggcattgtggcacggagacgatactctctacgacgtctggatgaaggagcga
gcgcacaccttgcaagaccaggagccactcggagaccggcagtacatcaaagatttcgag
ttcctgcgaaagcttacggagttcgaggattctattggtgtaaaattcaagcacattcgt
ctattggcgcgcgcgttcacggatcgctctgtgggctttacgaacctaaccctcggctcc
aaccagcgcctcgagttcctcggagacacggtgctgcagctggtggtatcggacaagctc
tacaaacacttcccggaccatcacgagggtcacctatcgttgctgcgttcatctctcgtg
aataaccgcacacaagctatggtgtgcgacgacctcaacatgtcggagtatgcgatctac
aacaacccgaaagccaaacccaccgccaagaaacacaaagctgatctgctggaagccttc
ctcggagcactttatattgataagaatttggagtactgccaagtattctgcagcgtgtgt
ctgttccctcggctgcaggagttcataatgaaccaggactggaatgaccctaaatcgaaa
cttcaacagtgctgtctgaccttgaggtctatgcagggcggcgaaccacaaataccattt
tataaagtcattgagtgcttgggaccaactaatactcgtctatacaccgttggagtgtac
tttcgggggaagaggctgtcctccggccgcggccattccatccaggaagctgagatgaac
gcggctgagactgctttagctactgcacatgaactgtttccacaattggatcaccagaag
agaatcattgcgaagagtatgcgccgcaaacggaaaaaggcgaagaacatacagggggtg
gataagtctgctaatgacttatttttacgacgagatgaagtgccgaaagcgtaccgccca
ggaacaaaactggaacaaagttccgaaagtgatgcagagctatccgacacagaggagccg
aaagaaaagaaatcggacgatgaatccgattccaaatcaggttcggattgtgactccggt
tccgggacggacaagttcgaaaacgtccaagttagcagtttagttagcgacatggagaga
ctgaaacaggatctcatcaacaggaacgagtatgataagttaaaggaaaaatgcaagaag
tctgactcagacgaggaactataa
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integrated database retrieval system
