Leptidea sinapis (Wood White): 126968300
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Entry
126968300 CDS
T09272
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin00450
Selenocompound metabolism
lsin00970
Aminoacyl-tRNA biosynthesis
lsin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
126968300
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126968300
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsin01007
]
126968300
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsin03016
]
126968300
Enzymes [BR:
lsin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
126968300
Amino acid related enzymes [BR:
lsin01007
]
Aminoacyl-tRNA synthetase
Class I (U)
126968300
Transfer RNA biogenesis [BR:
lsin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
126968300
Prokaryotic type
Other AARSs
126968300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_N_5
GST_C_3
GST_C_2
GST_C
GST_C_6
Arc1p_N_like
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
126968300
NCBI-ProteinID:
XP_050669169
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All DBs
Position
15:12845254..12885977
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AA seq
1057 aa
AA seq
DB search
MKIFTNDNNTATLKLLVAANLADKKIELKKASFEDNFAAPKSLPILQVDELTFFSSNAAT
QYLFPVVGLSETRQCLQIQEWEATRLQPTIANVLSSKTVPVDLKQVLQTLLQTIDSMLAK
HKYILGDKLSAADISIWSTLYPLNYNEELRNSYMSEYLNIKRWTGELNNAKAFTEALKQW
PGSQNGPFAQLSALGIPQISSIPSPVGTPDETQAVVTQDEIESAKQNWINGVENLQKPLK
QEKVVLPIKGQKNILITSALPYVNNIPHLGNIIGCVLSADIFARYCRMCDYNTLYVCGTD
EYGTATETKALEEGLTPRQICDKYYEIHNSVYRWFNIGFDYFGRTSTPEQTQIVQELFMK
LHDNGFISPQSVEQLFCENCQRFLADRFVEGTCPFPTCRYDNARGDQCDQCGKLINAIEL
LEPRCKVCSHRPTVRPSEQLFIELDQLEGSVRTWLQGVEAGWSGGARAVSRAWLRDRLRP
RAVTRDLHWGVPVPLEKYTKKVFYVWFDAPFGYVSITQCATKNYEKWWKPDKEVDVKLYQ
FMAKDNVPFHAIMFPASAIGINENIKLVDHIFATEYLNYEDSKFSKSRGVGVFGTDAQET
GIPSDVWRFYLASIRPETSDSSFNWTELCTRNNSELLNNLGNFCHRSLSFCANTFKGKLP
EATLTHNDYELISLVNREVVAYVQHMEKGRLREALRHVLSVSRLGNQHMQTEQPWVLLKG
SDGDKIRGATAISLCCQLAALLCALISPYMPDTSRKLKEQLNLKQDLRINPINPSLIQYI
PAGHVIGKPEPLFAKIEPELADKMRAKFAGTQSEREIRNANDSKTKSPGVAEIEKAIAEQ
GEKVRQLKASTKDKSVWQPEVNKLLELKKQLAGAQAQTGSVGDVTALEKAIAEQGGKVRQ
LKASTKDKAVWQPEVNKLLELKKQLAGAQAQTGSAVKPPTANNVKQETRNADVIEDLTKA
IAEQGEKVRKLKASTKDKSVWQPEVDKLLDLKKIMATAQLATPAPSDSVASLEKAVAEQG
EKVRQLKASTKDKSVWQPEVNVLLDLKKRLAQAQANK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcactaacgataacaatacggctactcttaaattgctcgttgcagcaaat
ctagctgataaaaagatagaactaaagaaagcttctttcgaagacaattttgcagcacca
aaatcgcttcccatcctgcaagttgatgaattgacattcttctcaagtaatgcggctaca
cagtacttatttcctgtagttgggttgagtgagactcgacaatgtctgcaaatacaggaa
tgggaagcaacaaggttgcaacctactatagcaaatgtgttgtcgagtaaaactgtaccg
gtcgacttaaagcaagtcttgcagacgttactacaaacgattgattcaatgttggctaag
cataaatatattttaggggataagctttcagctgcagatatttcaatatggagcacatta
tatccattgaattataatgaagagctgaggaacagttacatgtctgaatatttgaatata
aaacgatggactggtgaattaaataatgccaaagcttttacagaagcattgaaacagtgg
cctggctctcaaaatggtccatttgcgcaactctcagctcttggtataccacagataagc
agtataccatcacctgttggaaccccagatgaaactcaagcggttgtaactcaggatgag
attgagtcggccaaacagaactggattaatggtgtcgagaatttacaaaaaccgttgaaa
caggagaaagtagtattaccaataaaagggcaaaagaatatattgataacatcagcacta
ccgtacgtaaataatataccacatcttgggaacattattggctgtgtcctctccgctgac
atattcgctcggtactgtcgtatgtgtgactataataccttgtatgtgtgcggaacggat
gagtacggaactgctacggagacaaaagcgttagaagaaggcttgaccccgcggcagata
tgtgacaaatattacgagatccacaactcggtgtatcgctggtttaatatcggtttcgac
tattttggtcgcaccagcaccccagagcagacacaaatagtacaagagctatttatgaag
ttgcacgacaatggcttcataagtccgcagtccgtagagcagctgttctgtgagaactgc
cagaggtttctggccgacaggtttgtggaaggcacttgtccgtttcccacgtgtcgttac
gacaatgcacgcggtgaccaatgtgaccagtgcgggaagctgatcaatgcgatcgagctg
ctcgagccccggtgcaaagtgtgctcgcacagacccactgtccggccgtctgaacagctc
ttcatagagttggaccagttggaagggtctgttcggacgtggctccaaggggtggaggct
ggttggtcaggaggtgcacgagctgtcagccgggcttggctgagagatcggctccgacca
cgagctgtcaccagggacctgcactggggcgtgccggtgcccttggagaagtacaccaag
aaggtattctacgtgtggttcgatgctccgtttggctacgtcagcataacgcagtgcgcc
accaagaactacgagaagtggtggaagccggataaggaggtcgatgtgaaactgtatcaa
ttcatggcgaaggacaacgttccgttccacgcgataatgtttccagcgagtgcgatcggc
atcaacgaaaatatcaaacttgtcgaccacatatttgcaactgaatacctcaattacgaa
gacagtaaattttctaagtcacgtggcgttggtgtttttggtactgatgcgcaggagacg
ggaataccctcagacgtatggcggttctacctggcgagtattcgaccggagacttcagat
tctagtttcaattggactgaactttgtacaaggaataactctgagctgctgaacaatctg
ggtaacttctgtcatcgctcgctgagtttctgtgccaacacgttcaaggggaaactgccc
gaggcgaccctcacccacaacgattatgaactgatctcgctcgtcaacagagaagttgtt
gcctacgttcagcatatggagaagggtcgtctccgagaagcgctacgtcacgtgctcagc
gtatcccgactgggaaaccaacacatgcagactgagcagccctgggtgcttctcaaaggc
tccgacggggacaagattcgcggcgctacggccataagtttgtgctgtcaattagcagcg
ttattgtgtgcgctgatatcaccgtacatgcccgacacgagccggaaattgaaagaacaa
ctcaacttgaagcaagatctgaggataaatcctattaatccgtcgctcatacagtacatc
cctgctggacacgtgatcggaaaaccggagccgctgttcgccaagatagagccggaactg
gcggacaagatgagagccaagttcgctggcacgcagagcgagagagagataaggaacgct
aacgattcgaagacaaagtcaccgggcgtcgctgaaattgaaaaggcaatcgccgaacaa
ggtgaaaaagtgcgacaactaaaggcgtcgactaaggacaagtcggtctggcaaccggaa
gtgaacaaactgttggagcttaagaagcaactggcgggtgcgcaggcgcagaccggaagt
gtaggtgacgtcaccgctctggaaaaagcgattgctgaacagggtgggaaagtgcgtcaa
ctaaaggcgtcgactaaggacaaggcggtctggcaaccggaagtgaacaaactgttggag
cttaagaagcaactggcgggtgcgcaggcgcagaccggaagtgctgtcaaacctccaacc
gcaaataatgtgaaacaggagacgagaaacgcggacgttatagaggaccttacgaaagca
atcgcggaacaaggtgaaaaagttcgtaagctgaaagcgtcgacgaaagacaagtcagtt
tggcaaccggaagtggacaagttgttagatctcaaaaagataatggctacggcgcaactg
gcaacaccggcgccgagcgatagcgttgccagtcttgaaaaagctgtcgctgaacagggc
gagaaagtccgacagttaaaggcttctacgaaagacaaatcagtgtggcaaccggaagta
aatgtattactcgatctcaagaaacgtctcgcccaagctcaagctaataagtaa
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integrated database retrieval system