KEGG   Leptidea sinapis (Wood White): 126968678
Entry
126968678         CDS       T09272                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126968678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsin03041]
    126968678
   04121 Ubiquitin system [BR:lsin04121]
    126968678
Spliceosome [BR:lsin03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    126968678
Ubiquitin system [BR:lsin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126968678
SSDB
Motif
Pfam: SART-1 HIND Surface_antigen
Other DBs
NCBI-GeneID: 126968678
NCBI-ProteinID: XP_050669681
LinkDB
Position
16:9238481..9265254
AA seq 757 aa
MGSKKHKKDSKKKKHRSRSRSPLDGEERERKRHKKHKDRKKDRSPDVEEVPVDSHLNVKD
NGAVRSRSRSTSIPPTDTRKDKSHDKERRTSVERSVSPIAQPSSNQESLSIEETNKLRAK
LGLKPLEVTEKTADDGKIKDDLGEFYHKPAANITQQKKTEKIRERLEERKEKRKLEKKLK
TTLLVDEVASDDEDASAWVKKSREMEKQKQEAAKRAAMLDEMDEVFGVSELVAQEQRGDA
ELSYRERHLRGLRVAHDMDLLPEERDTILTLADKDVLAEDNEDVLVNVNIVDDERYKKNI
KERRKAAAGYQAYDEENEMAEALGLPRAVLAKYDEELEPGAAERSRGFLLGEQRSRDNVA
TSMQDRLYGAEKRLESLRMPELRVASDYMDEHEISAKFKKVKKKGKMRKKAKQEPIDVEE
YEAGTAPLETDDTEVKSELERELQQDEDEVEVDAELQAAVARARRLRQAPPTAPTTLKVE
DIERVKEEEEPMEESGGEGSAFMVLDATAEFCRTLGEIPTYGLAPNRDTTTEIMDFERDV
DMEVESEIKEEHTGEVDEEAAGAWSRVDIGKEKPVDLVAGSSVGLEAEPALGAGVAGALQ
LALSKGYLERAGSSAPRPSRQHPLAAAHYSIDDKQHGEDDKYSRRERGHDRGHGGPVSEF
REKNNFRPSIKLEYVDDEGRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKK
MSSTDTPLGTLHMLQQKQKETHSPYVLLSGNKKENNA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgggatctaaaaagcacaagaaggattccaaaaagaagaagcacaggagtagatcacgt
tcccctttagatggcgaagagcgcgagcggaaacgccataagaaacacaaagatcgcaag
aaggatcgatctccagatgttgaggaggtacctgtggactcgcatctaaatgtcaaagac
aatggagctgtacggagccgtagtcgcagtaccagtatccctccaactgacacacgcaag
gataaaagtcatgataaagaaagacgaacaagtgttgagaggtcagtgtcaccaatagct
cagccgtcatcaaatcaagaaagcttatcaattgaagaaactaacaaacttagggctaaa
cttggtctcaaacctctagaagtgacagagaaaacagctgatgacggtaaaatcaaagat
gatttgggagagttctaccacaagccggccgcgaacatcacccagcagaagaagactgag
aagatacgcgaacgactcgaggagcgcaaggaaaagaggaaacttgagaaaaaattaaag
actacccttctggtggacgaagtggcttcagatgacgaagatgcctcagcttgggtaaaa
aagtcgcgagagatggagaaacagaaacaggaagctgctaaacgggcggcaatgttggat
gagatggacgaggtattcggcgtgagtgagctggtggcccaggagcagcgtggagatgcg
gagctcagctaccgggagcggcacctgcgagggttgcgggtagcgcacgacatggacctg
ttgcccgaggagcgtgacacgatactgacactggccgataaagatgtcctggccgaagac
aatgaagacgtgctcgtcaacgtgaatattgtcgacgacgagaggtacaagaagaatata
aaagagcgacgcaaggcggctgcgggctaccaggcgtatgacgaggagaacgagatggcg
gaggctctggggctgcctcgggccgtgctggccaagtatgacgaggagctggaacctggt
gcggccgagaggagcaggggcttcctgctgggggagcagcggtcgcgcgacaacgtggct
acctcgatgcaggaccggctgtatggtgcggagaaacggctggagtcgctgcgaatgccg
gagttacgggtcgcctccgactacatggatgagcatgagatcagcgccaagttcaagaag
gtcaagaagaagggcaagatgcgtaagaaagctaagcaagagccgatagatgtggaggag
tatgaagcgggcactgccccattggaaaccgacgacacagaggtgaagtcggagctggaa
cgtgagctgcagcaggacgaggacgaggtggaggtggacgctgagctccaggcggccgtg
gcgcgcgcacgacggttgagacaagctccgcccaccgctcccaccaccttgaaggtggaa
gacatcgagagggtaaaagaagaggaggagccaatggaggagtcgggtggtgagggaagc
gcgtttatggtgctggatgcgacggccgagttctgtcgcaccctgggggaaatacccacc
tacggactggcacccaaccgggacaccaccaccgagatcatggatttcgaacgcgacgtg
gatatggaggtggaaagtgagatcaaagaggagcacacgggggaggttgatgaggaggcc
gcaggcgcctggagcagagtcgacatcggaaaagagaaaccggtcgaccttgtcgctggg
tcgtcggtggggctggaagcagagccagccttgggggctggagtggcaggtgctctccag
ctggctctcagcaagggatacctggagcgagctggaagtagcgcgccgcgaccttcacga
cagcacccgctggccgccgcgcactactccattgacgacaagcagcacggggaggacgac
aagtacagccggcgagagcggggccacgaccgcggccacggcgggcccgtctccgagttc
cgcgagaagaacaacttccggcccagcatcaagctggagtacgtggacgacgagggacgc
ccgctgtgtcccaaggaggcgttccggtacctctcgcacaagttccacggcaaggggccc
ggcaagaacaagcaggagaagaggatcaagaaagccgttcaggaggggttgatgaagaag
atgagctcgacggacacgccgctcggcactctacacatgctgcagcagaagcagaaggag
acgcactccccttacgtgctgctcagcggcaacaagaaggagaacaatgcctga

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