Leptidea sinapis (Wood White): 126968795
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Entry
126968795 CDS
T09272
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
lsin03015
mRNA surveillance pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126968795
09122 Translation
03013 Nucleocytoplasmic transport
126968795
03015 mRNA surveillance pathway
126968795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126968795
03041 Spliceosome [BR:
lsin03041
]
126968795
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
126968795
Spliceosome [BR:
lsin03041
]
Common components
Common spliceosomal components
Cap binding complex
126968795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AATF-Che1
DnaG_helical
DUF7169
DUF4611
JCAD
Beta-prop_IFT122_1st
Uds1
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
126968795
NCBI-ProteinID:
XP_050669858
LinkDB
All DBs
Position
16:4426961..4459878
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AA seq
796 aa
AA seq
DB search
MNRRRVHDEEDGYERLHRKRRRVSENQEIEDRLESLILRVGEKSSSSLESNLEGLASVLE
ADLSTFRVKILRILTDCAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKS
GKWNAARYCLRFIADLVNCHVLAASSLLTLLEVLVDCANEDTVPQVRRDWFVFAVLSTLP
WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADTPHLQEEYLDCLWAQIKK
LRQDNWSEKHIPRPYLAFDSILCEALQHTLPTIQPPPHNDGDSYPMPRVIFRMFDYTDCP
DGPVLPGAHSIERFLIEEHLHNIVEAYHLERKECAAQLLCFPYKAKIPLEYCIVEVMFAE
LFNLPRPRYREVCYGSILIELCKLQPATMPQVLAQATEILFMRIDTMSVACFDRLVNWFS
YHLSNFQYRWSWDDWESCAQLDADHPKPRFIREVLSKCQRLSYHQRIKDMVPESLQSLVP
HKPEPIYKYSMEGAASLPGTEAAHQLVVCVRNKCTPEEALNVLRELPNPLREGEAGTHAS
QYNPLKIDVFVQTLLNLGSKSVSHSFAAISKFHYVFKILAESEEAQICVLRNLWELWQRH
PQMVCVLVDKMLKTQIVECSAVATWLFSKEMSPFFTHSCLWEVLHLTIDKMNKHVSKLSK
ELQEAREALARADSSSSDSEDEGSKKKKDQDKPTEEAVERMEERLEMAHTDQKRLFLIVF
QRFIMILSEHLVRADTDARDHDTTWYRSTVGRLRQVFLAHHEQVQKYSSTLETLLFTQDL
DPHILDVFHQFVALTA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtagaagagtccacgacgaagaagatggatacgagcgtctgcatcgtaaacgt
agacgagtgtctgaaaatcaagaaattgaagatagactggaatcgcttattttacgcgtt
ggtgaaaaaagtagctctagcttagagagtaatttagaaggcttagccagtgttttagaa
gctgatttgagcacttttagagtaaaaatccttcgcatacttacagattgcgcaatacgc
atgccagagaaatgtacaatttatgctacattagtaggtctattgaatgcgaaaaactac
aactttggaggtgagttcgtcgattacatcgtgaaaactttcaaagaaaatctgaaatct
ggtaaatggaatgcagccaggtattgtttgagatttattgctgacttagtaaactgtcat
gtgttggccgcctcatcattgttaacattattagaagtattagtagactgtgctaatgaa
gacacagttcctcaagtgagaagagattggtttgtgtttgctgttctttcaacactccca
tgggtggggagggagttgtatgaaaaaaaggaatctcagttagaccatttattagtcaca
atagaggtatttttgaacaagcgcagcaagaaacattggcctgcattaaaggtgtggtca
gcagacacaccccaccttcaggaggagtatttggactgcctatgggcacaaataaagaag
ttaaggcaagataattggtcagagaaacatatacccaggccatatcttgcttttgactca
atattatgtgaagctctacaacatacacttcctactatacagcctccaccacataatgat
ggggattcatacccaatgcccagggttatattccgcatgtttgactacacagattgccct
gatggtccagtacttcctggtgcacattccatagaaagattccttattgaagaacattta
cataacattgttgaggcctatcatttagaacgaaaagaatgtgctgcccagcttctatgt
tttccatacaaggccaagataccattagagtactgcattgtggaagtgatgtttgctgag
ctgttcaaccttcctcggccaagatatcgcgaagtatgctatggttcaattttgatagag
ctatgtaagctccaacctgcaacaatgccacaagtacttgcccaggcgactgagatattg
tttatgagaattgatacaatgagtgttgcatgttttgatagattagtgaattggttctct
taccacttgagcaacttccagtatagatggtcctgggatgattgggaatcatgtgctcaa
cttgatgcagaccatccgaaaccacgtttcattagagaagtactcagcaagtgtcaaagg
ttgtcatatcatcaaagaattaaggacatggttcctgaatctttgcagtctcttgtacca
cacaaacctgaacctatatacaagtattcaatggaaggagcagcgtcactgccgggaacg
gaagccgcccaccagctagtggtgtgcgtcaggaacaagtgcactccggaggaagcgctc
aacgtccttcgggaactgcccaacccgctccgggagggtgaggccggcacccacgcgtcc
cagtacaacccgctcaagatagacgtgttcgtgcagaccctgctcaacctgggcagcaag
agtgtgtcgcacagcttcgcggctatatccaagttccattacgtgtttaagatattggca
gaatcggaggaagcccagatctgcgtcctgcgcaacctgtgggagctgtggcagcgacac
ccgcagatggtgtgcgtgctggtggacaagatgctcaagacgcagatagtggagtgtagc
gccgtggccacgtggctcttctccaaggagatgtcgcccttcttcacgcacagctgcctg
tgggaggtgctgcacctcaccatcgacaagatgaacaagcacgtctccaagctgagcaaa
gaattacaagaggctagggaggctctggctagagcagactcaagcagttcagactcagaa
gatgagggcagcaagaagaagaaagaccaggacaaacccactgaagaggccgtggagcgt
atggaggagcggctggagatggcgcacacggaccagaagcggctgttcctgatcgtgttc
cagcggttcatcatgatcctttcggagcacctcgtgcgcgctgacacggacgcgcgcgac
cacgacacgacctggtaccgcagcaccgtgggccgcctgcgacaggtgttcctggctcat
cacgaacaagtccaaaagtacagcagcacactggagacgctgctcttcacccaagacctg
gaccctcacatattggacgtgttccaccagttcgtcgctctgacggcctag
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