Leptidea sinapis (Wood White): 126969172
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Entry
126969172 CDS
T09272
Name
(RefSeq) piezo-type mechanosensitive ion channel component
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126969172
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsin04040
]
126969172
Membrane trafficking [BR:
lsin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
126969172
Ion channels [BR:
lsin04040
]
Other channels
Mechanosensitive channel (Piezo)
126969172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
126969172
NCBI-ProteinID:
XP_050670448
LinkDB
All DBs
Position
17:7630483..7707970
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AA seq
1584 aa
AA seq
DB search
MAEYYVSVLLIRLCLPAALLISIALRPFGLSLIYLLLYLIAPFPQVPNTIIDFRGWCRKY
ILLNLGVSSLLLLTHAAWHSTLAAFGVYGSILDEYPIIKEIGLNLGLVSYAGIDPFMAVQ
YLAPELVVMGSSLAVYLLVRCVLANSSNTEREKKDYKHQKYPLLTSAGKYLALFLIMIAG
IVRPSVTSGLYFVVFMGAATAWALGRPLERGFAVISRCVMALMGAHVAVLLVYQCSWLIE
LYPPDMEFARYFGLTKFVIINSTNSSTSFSYDVQQDNHWAVFTSPFVILIAYFFLAIESR
ELFKPKERKKSALTGLEAGKVNGSLMRGVSFHRASRLTTRDRWMSATKRARLMRNLSPSK
RWSGSTSRPLHQDSTGSVVVADEESALEVEEPTLMDDIIAAVIDFFQVLVRSSYIATTIT
MMAWSIMFHSWLAFVFLMWANVVWLCQDQRSFMLKSSPVLVIYAMFLLVAQYIYSMDLTE
SELPSNITEVNLHQIGLGRADGDPFVTLLIKSLFTWMFWVTLRQFVEEMRIRRQSKMITD
IAAPLQLTVSAAHSALEGQREGEKHSRLLRAFGEWLRALCAHYWIYVVVIMLFVIGITGD
RMTIFRIIYMFLFLGFILMFQISWYWWRRLMYMFWITVIIYSMINLILIYIYQFDNFSKI
IEKYLMINEQLQHDLGLEPYHPADLFVKLLTPTLFLIITIMQVHYFHKDFMALSYLAMTR
ADSTPRDMGSARPSQGGASTIKDDLPQLPLEEERPVTDEPASATEPDNSMGTSTNPAPKS
LRKPSQSRSYAPTITEHDSIKFLPWLKSTFTSLKVALLQWTDKVFLFLDIHLIKIIFISL
MLMCVFNVSAMHVPIMLILTPATLLSARKQRFCVLLISALISVYFMAKMVYQIKYIQHSY
FDVNCTVIGENNTMNLTTFNNAQWVGFTKVTPDKPLVTILKGYIALIALITFYSLVTYRQ
QIHRDLGLLPNTKEKLMFPEITRKEADKDVKHCIQYLFNYGFYKFGVEITLICLMGVIGS
RMDVYAVIYAGWLLALVSLRRAALARVWPAFTALVTLFVPFQYIISLGFMPQFCVNYPWS
GDGQQMKHIRTWLFLPYATEPPHAIKLIFDFFLLMFASRQLRVFRVENMYGDHYLGGSNR
EDIGKDWETPEFVNPVPDFLGYVGSWLDVVKRMVFLGMLWVTLAIMFMTGTNRVNLFSMG
YLIGSFIFLWQGTDFYLRPKHAILLWWSWLVRYNVCVVVVKAALQIPGCIFNSAMQQHAC
WVVQLLGIGCVDKFAGGNIARFLKMHYDKDTVCSVPQEDIGLAWDGVCFAFLILQRRLFH
SYYFYRVIDESKATTVLASRGAELIEELRQKQMQLQEDQEVKILEKIKVKMERIKANQKK
IQGVLSREPIHHDRGSVGGYRCRRVSTLRHEAVRSGDYYMFDEFDDTDVPLKDEESSSDE
DAPKEMGIGKLLSTAIKTDVRRAMSLRRASMPALRARRLVLSAKPSSYQHETHPPSSLGA
QTARDYDQDTSGRQDRAGPSSELDDFAPIPEGETWMDKLKGFSETVLAFISSFLTSITRY
LMRYSRDYRYVSKMLSIEKKILKV
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatattatgtatcagtgctattaattcggctttgcttgcctgcagctcttctg
ataagcattgcacttcgtccatttggtctctcgttgatatatcttctcctctacttaata
gctccgtttccacaagtgccgaatactattattgattttagaggatggtgtcgaaaatat
attctactgaatcttggtgtgtcaagcctgctactgctcacccatgctgcgtggcacagt
acgctggccgccttcggagtatatggctcgatcctcgatgaatatcccatcataaaggaa
atcggcctcaatctgggattggtctcgtatgcaggcattgatcccttcatggccgttcag
tacttagcacctgagttggtggtgatgggctcgtcactcgcggtctacttgctagtccgt
tgtgttctcgccaactcttcaaatacagaaagggagaaaaaagattacaaacatcaaaaa
tatccactactaacaagtgcagggaagtatttggcgttgtttctgataatgatcgccggg
atcgtgcgccccagtgtgacgtcagggttgtacttcgtcgtgttcatgggtgccgcgaca
gcctgggcgctggggagaccgctcgagagaggcttcgcggtgatcagccggtgtgtgatg
gccctgatgggagcacatgtggccgtgctcttggtctaccagtgctcttggctcattgag
ctgtacccgcccgatatggagttcgctagatacttcggtctaacaaagtttgtgatcatt
aacagtacaaactcgtccacaagtttctcttacgacgtccaacaggacaaccattgggca
gtgttcactagtcccttcgtcatactgattgcatactttttcctcgcaatagagtcgaga
gaacttttcaagccaaaggagaggaaaaagagcgctttgacgggtcttgaagcgggtaaa
gtgaacggctccttaatgcggggcgtctccttccaccgcgctagccgcctcacaacacgg
gatagatggatgagcgccacgaagagagctagactaatgcgtaacttaagtccaagcaag
cggtggtcgggctcgacatcgcgaccgcttcaccaggactcaacaggatccgtcgttgtt
gctgatgaagaatcagccctagaagtggaagagccaacgttaatggacgatattattgcc
gctgttatagacttctttcaagttcttgtcaggtcctcctatatcgcgactacaataact
atgatggcgtggagcattatgttccactcgtggctcgcgttcgtgttcctgatgtgggcc
aacgtagtgtggctctgtcaggaccagcgctcgttcatgctcaaatctagtcccgtgctg
gtgatctatgctatgttcttgttggttgcgcagtacatatacagcatggacctcaccgag
agtgagctgccgtccaacataacggaagtcaaccttcatcaaatagggctgggtcgagcg
gacggggatccgttcgtaactctgctgataaagtcgttgttcacctggatgttctgggtg
acgctgcggcagttcgtagaggagatgcggatacgcaggcagagtaagatgattaccgac
atagcggcgcctctgcaactcaccgtctccgcagcgcatagcgcactagaaggccaacgc
gaaggcgagaaacattcgcggttgctgcgagcattcggcgagtggctgcgagcgctgtgt
gctcactactggatctacgtcgtggtcatcatgctgttcgtgatcggcatcaccggcgac
cgcatgaccatattcagaattatctacatgttccttttcctcggatttatccttatgttc
cagattagctggtactggtggagaagattgatgtacatgttttggataacagtcatcata
tattcaatgattaatcttatactcatttacatataccagttcgacaacttttctaagatt
attgaaaaatatcttatgatcaacgaacagttacagcacgacctcgggctggagccgtac
cacccggcggacctgttcgtgaagctgctcactccgacgctcttcctcatcatcacaatc
atgcaagtccactacttccacaaggacttcatggccctatcatatctcgctatgacaaga
gccgacagtacacccagagacatggggtccgcgcggccaagccagggcggtgcctctacg
attaaagacgatttgccccagctgcctctagaggaggaacgtccagtcacggacgagcct
gccagtgcgaccgagcctgataactctatgggcacatcgaccaaccctgcgccgaagtct
ctcaggaaaccatcacaaagtcgttcgtacgcgccgacgataacggaacacgactcgatc
aagttcctgccgtggctcaagtccacgttcaccagcctcaaggtggcgctgctgcagtgg
accgacaaggtgttcctgttcctcgacattcacctcatcaagatcatattcatatcgctt
atgctgatgtgcgtctttaatgtctctgctatgcacgtaccaataatgctgatactcacg
cccgcgaccttgctgagtgctcgcaagcagaggttctgcgtgctgctcatatcagcgctc
atcagcgtctacttcatggccaagatggtgtaccagatcaagtacatccaacactcctac
ttcgatgtcaactgcactgtgataggtgaaaacaacactatgaacctgacgacgttcaac
aacgcacaatgggtcggcttcacgaaggtgacgcctgacaagcctctggtgacgatcctc
aagggatacatcgcgcttatcgctctgatcactttctactcactcgtcacttataggcag
caaatacacagagacttgggactgctgccaaatacaaaagagaagctgatgtttccggaa
ataactcgcaaagaagcggacaaagatgttaaacactgtatccaatatttattcaattat
ggcttttataaatttggagttgagatcacgctgatatgcctgatgggcgtgatcgggtcc
cgtatggacgtgtatgcggtgatatacgccggctggctgctggcgctagtgtcgctgcgg
cgagccgcgttggcccgcgtgtggcccgccttcaccgcgctcgtcacgctcttcgtgccc
ttccagtacatcatatcgctggggttcatgccgcagttctgtgtcaactatccctggagc
ggcgacggccagcaaatgaaacatatacgtacttggcttttcctgccgtatgctacggag
ccgccgcacgcaatcaagttgatattcgacttcttcctactcatgttcgcttcacgacag
ctgcgtgtgttcagggttgagaacatgtacggtgatcattatctcggagggtccaaccgc
gaggacatcggcaaagattgggaaacacccgagtttgttaatccagtgccagacttcctg
ggctatgttgggtcttggctggacgttgtcaagcggatggtgttcctgggcatgctgtgg
gtaactctcgccattatgttcatgacgggaacgaacagagtcaacctgttctccatgggc
tacctcattggttccttcatcttcctctggcagggcacagacttctatctacgaccaaag
catgctatactgctgtggtggtcgtggctcgtgcggtacaacgtgtgcgtggtggtcgtg
aaggctgccctccagatcccgggctgcatcttcaactcggccatgcagcagcacgcgtgc
tgggtggtgcaactactcggcatcggctgcgtggacaagttcgcgggcggaaacatcgcg
cgcttcctcaagatgcactatgataaggacacggtgtgttcggtgccacaagaggacatc
gggctggcgtgggacggtgtctgcttcgcgttcctcattctgcagcgaagactcttccac
agctactacttctacagagtcatcgacgagagtaaagctaccactgtgcttgcgtccagg
ggtgcggaactgattgaggaactgcgtcagaaacaaatgcagttgcaagaagaccaggag
gtcaaaatcttggagaaaatcaaagtgaagatggaaaggatcaaagctaaccagaaaaaa
atacagggtgttctgtcaagagaaccgatacatcacgaccgtggtagcgtcggagggtat
cgttgccgccgagttagcacgttgagacacgaagcggttagatctggagactactacatg
ttcgatgaattcgacgatactgacgttcctctcaaagatgaggaatctagttctgatgaa
gatgcaccgaaggaaatgggcattggaaagttgctgtcgacggcgataaagacggacgtg
cgacgcgctatgtcgttgcgtcgcgcgtctatgcctgcccttagagcgcgccgactcgtc
ctgtccgcgaaaccttcctcctatcagcatgagacacatccgccgtcgtctctgggcgct
caaacagcacgtgactacgaccaagacacgtcggggcgccaagaccgtgccggcccttcg
tcagagctcgacgattttgcaccaataccggagggtgaaacatggatggataaactcaaa
gggttctcggagacggtcctggcgttcatctccagcttcctcacttccatcacccgctat
ctgatgagatactcgcgagactaccgatacgtctccaagatgctttcgattgagaagaaa
atattaaaggta
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