Leptidea sinapis (Wood White): 126969324
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Entry
126969324 CDS
T09272
Name
(RefSeq) tuberin
KO
K07207
tuberous sclerosis 2
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04140
Autophagy - animal
lsin04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
126969324
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126969324
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsin01009
]
126969324
Protein phosphatases and associated proteins [BR:
lsin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126969324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
126969324
NCBI-ProteinID:
XP_050670637
LinkDB
All DBs
Position
18:complement(1114108..1201411)
Genome browser
AA seq
1889 aa
AA seq
DB search
MSSRDRDTKSLQDKLKVFFKKGASAPLAAQNELVVTADLRKELSPESPLSRRLRAVKELG
DKVLHIRVQDGGVEKIWACIRDLLEDVNIEGRHAALGLLRCIAEGQTELLIMRTILFRFL
RETHSTHPPEDYQLRFKLLNTLTNTGKDIKCFEEQIGPFLLEWLPQLQSTAHIIDFVQLI
TNVVKFNAVYLDEEIVHGIVNNSCHLCVYSADSGVVLGCLSLLEAVVSYSLLPRTALPTF
VAALCRTVNVEHYCQNSWKLMRNVMGADLGHAALQELVEMLRGEGGAGGQGGAGREAEGE
GGGLLRGAVFYINMALWGPRRVHSLHVSPLAVLPAFLKALGGRQAVVTYEVVVSLQSLVA
RAPLDLHELCWDVLLDIVRAVLHHDKSFDPPNELIHSRVHALITTLEQLQDAGQFQGDPD
SLLDLIDYCGHDRPESSTVRLVSLRGAALGGPGDAGAALALVERYLRQEPRLPVRLHTLH
TVLAYIKRNRYTGGEELVERVGAAALTACAADAEAPLRAAAARAAPDLLRACGATLAVDL
IDQLEKILNRPFEVYVSDVCIGAESDTSDVSGAAGALLEVLHERLAGPAAPPARALLVLL
DHLALHYRRAALLHHHPRARLQILEMLFALRANPLNCVGFCYEESGAVVWGAAAARLRPT
CSPLLLVEPPAARNQAPPPRDLPPGACLIPVGRCARALVAALGCESEWSVLAHVLRALPQ
LLAARAPALGRRAQDLDVLAGSLCAMLADRGGAPACVRAHPTLLLSDFHALVLPALAAMS
SYHAYLEPPTQQRIVRCLLKYGMVLRTPQQYIMALTAFALETRDTMVRMLPEVLLDLSKI
SDTKAIASPMLEFLSTLTRLPRVFASFVEDQYMSVFAILLPYTNPSRYNHYVVSLAHHVI
AAWFLKCRLSYRRNFVRFIIHGLHNYIIMPFEEQLQYKSNVHQSSANEDSSNRQRSSSLG
SKAVSRAPLSGKVAGQGAPAAFHVELTETCVDLLARYTFTPCSVKPQRSERTDGLFNGGQ
STTWLVGHKLVTITTSGCLQSAARRALCDRCSATCCQAASDDLSATAAAPHVQVRDSSES
NGSSSNHLHPEVKRQNSSENKSSDPFMDFLSSCNLRIDKISKEVVEEGVWALGTGGGGGG
AEGGACECWCARWAQLHVRSATGDVSWLLRMQNHGGAEGGACECWCARWAQLHVRSATGD
VSWLLRMQNHITASQLQECDLQDMLTVISPPLAAGVNNVAVGGPLANNTGAGAPGGHNMA
AGAPGGKPASAQLTTHAASATDLATEESKLNRQTQQHATDLHKSSSDSVVASDRLQASPG
APRPHPARISTQPINIPGSPQRTSAPADAADIDVLLFATEGKSRHPVRRSNSSPEMSTSW
KLTSREPPSPAPCPAPAPSARPYLELADPEEMILLPSCEPTSASMTMHACKKAAKKSDMR
VSCEAIPEEMSGTSPQPLPLVQKSEQQNKQHPHLLTYNSDPGNASSDGDGESATDKDNHV
ARADTPSGGVHSTHHHLQKTSSDSTVGATGAGLRDELPPLARSKRSNTISVMSPTDRTRE
PISRPGSGCSSSSGGVAPSFVFLQLYHNMSTYPISPPVPGEAPPMVSAGAERPLKVTGAQ
HLRTLKNIDLVPPLETYKVGVLYVGPGQQDDEVAILKNEYGSVRYCEFLRALGTLVPLEE
AAVQESNLFLNLETGGKDGRYTYVWTDDIMQVLFHVATAMPCWPRDPNCNEKLKYIGNDY
VSIVFNDSGHDFNILTIKGQFNLCVVVVEPLEGGVCRVLVKTKDERIRTKFLAHLQPITL
SDGCAPLLARQQALHCALASQISQSLEQRGGAPYASNCLERLRLIKRLRARVEGERRAAA
ARAPAPYHASPHSAHTQRRVAIDDFNDYT
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgagacagggacacaaagtctcttcaagacaaacttaaagtgttcttcaaa
aaaggagcatcagcaccgttggccgcccaaaacgagctggtagtgacagcagatctcagg
aaagaactaagtccagaatctccacttagccgtcgtctccgtgccgttaaagaattggga
gataaagtacttcatattcgtgtacaagatggtggtgttgaaaaaatttgggcatgtata
agggatcttttagaagatgtaaatattgaagggcgacatgcagctctgggtctcctccgc
tgcattgcagagggacagacagagctgttgataatgcgcacaatactcttcagattctta
agggagacacactcaacacaccctcctgaagactatcagctcagattcaaacttcttaac
actttaactaatactggcaaagatatcaaatgcttcgaagaacagattggcccatttcta
ttagagtggctccctcagctgcaatccactgctcatatcatcgactttgttcaactcatc
actaatgtcgtcaagttcaatgcagtgtaccttgatgaagaaattgtacatggcattgta
aataacagctgccacctgtgcgtgtactcggccgacagcggcgtggtgctgggctgcctg
tcgctcctggaggccgtggtgtcgtactcgctgctgccccgcacggcgctgcccaccttc
gtggcggcgctgtgtcgcaccgtcaacgtggagcactactgccagaacagctggaagttg
atgcgaaacgtgatgggcgcggacctgggccacgcggcgctgcaggagctggtggagatg
ctgcggggcgaggggggcgcgggcggccagggcggcgcggggcgggaggcggagggcgag
gggggcgggctgctgcgcggggccgtgttctacatcaacatggcgctgtggggcccgcgc
cgcgtgcactcgctgcacgtgtcgccgctcgccgtgctgcccgccttcctcaaggcgctg
ggcggacggcaggccgtggtgacgtacgaggtggtggtgtcgctccagagcctggtggcc
cgcgctccgctggacctgcacgagctgtgctgggacgtgctgctggatatcgtgcgcgcc
gtgctgcaccacgacaagagtttcgatccgccaaacgaactgattcacagccgggtccac
gcgctgattacgaccctcgagcagctgcaggacgcgggacagttccagggggatcctgac
tcgttgctcgatctcatcgattactgtggccacgaccgaccggagtcgtcgacggtgcgg
ctggtgtcgctgcgaggcgcggcgctgggcgggcccggggacgcgggcgccgccctggcc
ctggtggagcgctacctgcggcaggagccccgcctgcccgtgcggctccacacgctgcac
accgtgctggcctacatcaagcggaaccggtacacgggcggcgaggagctggtggagcgc
gtgggggcagcagcgctgacggcgtgcgccgccgacgccgaggcgccgctgagagctgcg
gccgcacgcgcggcgcccgacctgctgcgggcttgcggcgcaacgctcgccgtcgacctc
atcgaccagctggagaagatcctgaaccggccgttcgaggtgtacgtgtcggacgtgtgc
atcggcgccgagtcggacaccagcgacgtgtcgggcgcggcgggcgcgctgctggaggtg
ctgcacgagcggctggcgggcccggccgcgccgcccgcgcgcgcgctgctcgtgctgctg
gaccacctggcgctgcactaccgccgcgccgcgctgctgcaccaccacccgcgcgcgcgc
ctgcagatcctagaaatgttgttcgctctacgcgcgaatccgctgaactgcgtggggttc
tgctacgaggagagcggcgcggtggtgtggggcgcggcggcggcccggctgcggcccacg
tgctcgccgctgctactggtggagccgcccgccgcccgcaaccaggccccgccgcccagg
gacctgccgccgggcgcatgcctgatcccggtggggcgctgcgcgcgcgcgctggtggcg
gcgctgggctgcgagagcgagtggtcggtgctggcgcacgtgctgcgcgcgctgccgcag
ctgctggcggcgcgcgcgccggcgctgggccgccgcgcgcaggacctggacgtgctggcc
ggctcgctgtgcgccatgctggccgaccgcggcggcgcgccggcctgcgtgcgcgcgcac
cccacgctgctgctgtccgacttccacgcgctggtgctgcccgcgctggccgccatgtcc
tcctaccacgcctacctcgagccgcccacgcagcagcgcatcgtgcgatgtctgctgaag
tacggaatggtcctgcgcacgccgcagcagtacatcatggctctgacggcgttcgcgctg
gagacccgtgataccatggtgcgcatgctgcccgaggtgctgctcgacctgtccaagata
tccgacacgaaagccatcgccagtcccatgctcgagtttctatccacgctcacgcgactg
ccgcgcgtgttcgcgtcgttcgtggaggaccagtacatgtcggtgttcgccatcctgctg
ccgtacaccaacccctcgcgctacaaccactacgtcgtctcgctcgcacaccacgtgatc
gccgcctggttcctcaagtgtcgcctctcctaccgcaggaatttcgttcgatttattatt
catggcctccacaactacatcataatgccgttcgaggagcagcttcagtacaagagcaat
gtgcaccagagctccgccaacgaggactcctcgaaccgacagcgaagttccagtctgggt
tcgaaggcagtgtcccgcgcacctctgtcggggaaggtcgcggggcagggcgctcccgcc
gccttccacgtggagctgacggagacctgcgtggacctgctggccagatacaccttcacg
ccctgcagcgtcaagccgcagcgaagcgagcgtacggacgggttgttcaacggcggccag
tccaccacgtggctggtgggtcacaaactggtcaccatcaccacctccggctgtctgcag
agcgccgcccgccgggctctctgcgacaggtgctctgcgacgtgctgccaggcggcgagc
gacgacctgtctgcgaccgcagccgcgccgcacgtacaagttagagacagttcggagagt
aacggatcgtccagcaaccacctgcatcccgaagtgaagcggcaaaactcgtcggaaaac
aaatcatcggatccattcatggattttttgagttcatgcaatctgcgcatcgacaagata
tcaaaagaagtggtcgaggagggcgtctgggcgcttggcacggggggcggagggggcggg
gccgagggcggcgcctgcgagtgttggtgcgcgcgctgggcgcagctgcacgtgcgctcg
gccaccggcgacgtgagctggctgctgcggatgcagaaccacggcggggccgagggcggc
gcctgtgagtgttggtgcgcgcgctgggcgcagctgcacgtgcgctcggccaccggcgac
gtgagctggctgctgcggatgcagaaccacataactgcgtctcagctgcaagaatgcgac
ctgcaagacatgctgacggtgatatcgcccccgctggccgccggtgtcaacaacgtggcc
gtaggagggccgctggccaacaacacgggcgctggcgccccgggcggccacaacatggcc
gctggcgccccgggcggcaagccggcctccgcacagctgaccacgcacgcagcctccgcc
actgacctcgcaacggaagaatcaaagctgaaccgacaaacgcaacaacatgctacagac
ttacacaaatccagctcggactcggtggtggccagtgaccggctgcaggcgtcgcccggg
gcgccacgacctcaccccgctcgaataagcacgcagcccatcaacatcccggggtcgccg
cagcggacgagtgcgcccgccgacgccgccgatattgacgtgctgctgtttgcgacagag
ggtaaaagcagacacccggtgcgtcgttccaactcgtcaccagagatgtcgacgtcatgg
aagctgacgtcacgcgaacccccctcgcccgccccctgccccgcgcccgcaccctccgcc
aggccctacctcgagctggccgaccccgaggagatgatcctgctgcccagctgcgaaccg
acgagcgcatcgatgaccatgcacgcgtgtaaaaaggcagctaagaagagtgacatgcga
gtgtcgtgcgaggccatcccagaggagatgagcggcacctccccgcagccgctgcccctt
gtacaaaagagcgaacaacaaaacaagcagcatccgcatctgctcacctataactctgac
ccagggaacgcgtcgagcgacggagacggagagagcgccacagacaaggacaaccacgtg
gcgcgcgcggacacgccctctggcggcgtccacagcacgcaccaccatctacagaagacc
agcagtgacagcacggtgggcgcgacgggcgcggggctccgcgatgagctgccgccgctg
gctcgctccaagaggtccaacaccatctccgtgatgagccccacggaccgcacccgcgag
cccatatcccggcctggcagcggctgcagctcctccagcggcggcgtggctccgtcgttc
gtgttcctgcagctgtaccacaacatgagcacgtaccccatctcgccgcccgtgcctggg
gaggcgccgcccatggtgagcgcgggagcggagcggccgctcaaggtgaccggcgcgcag
cacctccggacgctcaagaacattgacctcgtgcctccgctcgagacctacaaggtcgga
gtgctgtacgttggtcccgggcaacaggatgacgaggtcgccattttgaaaaatgaatat
ggcagtgtgaggtactgtgagttcttgcgcgcgctgggcaccttggttccgctggaggaa
gctgccgtgcaggagtccaacctgttcctcaacctggaaaccggcggcaaggatggccgc
tacacctacgtgtggacggacgacatcatgcaggtgctgttccacgtggcgacggcgatg
ccgtgctggccccgcgaccccaactgcaacgagaagcttaagtacatcggcaatgactac
gtgtccatcgtcttcaatgactccggacatgacttcaacattctaactataaagggtcag
ttcaacttatgcgtggtggtagtggagcccctggaaggaggcgtgtgccgggtgctcgtg
aagaccaaggacgagcgcattcgcaccaagttcctggcacacctgcaacccatcacgtta
tccgacggctgcgcgccgctgctcgcccgccagcaggcgctgcactgtgcgttggcgtca
cagatcagccagtcactggagcagcgcggcggagctccgtacgcctccaactgcctcgag
cgactgcgcctcatcaaacggctccgcgcgcgcgtcgagggcgagcggcgtgcggccgcc
gcgcgggcgcccgccccctaccacgcgtcgccgcactccgcgcacacgcagcggagggtc
gccatcgacgacttcaacgactacacgtaa
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