Leptidea sinapis (Wood White): 126969411
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Entry
126969411 CDS
T09272
Name
(RefSeq) protein shuttle craft
KO
K12236
transcriptional repressor NF-X1
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126969411
04121 Ubiquitin system [BR:
lsin04121
]
126969411
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
126969411
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
126969411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
PAM2
Motif
Other DBs
NCBI-GeneID:
126969411
NCBI-ProteinID:
XP_050670768
LinkDB
All DBs
Position
18:4696074..4736322
Genome browser
AA seq
1175 aa
AA seq
DB search
MSQWNNTFMSNNQYQNSSNLNGDPNSQYHSQNYYDNRQGDSRANQYVSFNEFISQMQVPT
DSASYNSVQNPNIPNSQFLNVGNHQNDTSNQSNQLNYDYGASYSAHGNNRNEIQMNNGGQ
TNSAPNFTSEMVSKSKLTPTAVEFVPKSSFQMPTRNSKPREETSAENSLNEPNNKKQPES
QNWRDRPSSSGHSSNTYNINGKDNQSKYFDKFETNRYHSRNNQTESNVSHTKNSKYENKN
RKFDNNIKNKSDSNYQMSDNGDTNNQRRGKYDSYSNGDSNSRYSDNRDGNQRKSNVKVKN
KDSDPRTFYNTKVNYQDRRNGKDTQRSKGRVGSQRLGNDYNSYEDEQYANSYYQYKDEVV
KNSTASPSRHKKNPVPFAGNTEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWHCSNCY
HVMHLKCIRKWASSSVVEGKWRCPACQNTSEEIPTEYRCMCGAMRSPEYQRGGNGAHTCG
KACKRPRSCPHPCTLLCHPGPCPACQATISKKCGCGAETRSVLCSSKLPQECGRKCDHLL
NCEVHKCARDCHEGPCDPCQETVTQVCYCPAAKSRSVACTAESSREGQWSCEASCARVLA
CGAHVCRRECHPPPCDACPLRPGNVPTCPCGNTRLKSGERKSCTDPIPLCDNICAKPLEC
GPDGDKHFCKEKCHEGPCRVCPDTTLVQCRCGHLTRDIPCADYPSQRNEVFCQRKCNKKL
SCGRHRCRATCCDSVSHRCSLVCGRSLSCQLHRCEALCHTGHCAPCPQLSFEELRCSCGA
EVILPPVRCGTKPPACGATCARARACGHEPHHSCHAGDCPPCVVLTTKMCYGNHEERKTI
PCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTEKCKQGCREKRPRCGHECGSPCHAD
NGGVCPAATACRRPVAVTCPCLRRKATRACAENMRDYDKTLNALAATRIQEGGSVDISEA
QRSSAMLKTLECDEECSQEARARQLALALQIRNPDVSAKLAPRYSDSLRAAAAREPAFAQ
HVHDKLTDLVQLAKKSKQKTRAHSFPSMNRAKRQFIHELCEHFGCESVAYDAEPNRNVVA
TADKEKSWLPAMSILEVLAREAGKRRVPGPVLRTSGAAATSSHTTKSSGGWATLTSTNAW
AIRSQPSASTTAVTRTKPEPKPENKIDYFDNPPDN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtggaataatactttcatgtctaataatcaatatcaaaattctagcaattta
aatggtgacccgaacagccagtatcatagtcaaaactactatgataataggcaaggtgat
agtagagcaaatcagtatgttagcttcaatgagttcatttcacaaatgcaagttcctaca
gacagtgctagctacaatagtgtacaaaacccaaatatccctaatagtcaatttctgaat
gtaggtaatcatcaaaatgatacctctaatcaaagcaatcagctaaattatgattatgga
gcaagttattcagctcatggtaataacagaaatgaaattcaaatgaacaatggaggtcaa
actaattctgctcctaacttcaccagtgaaatggtttccaaatcaaaactaacaccaact
gctgtggaatttgttcccaaaagctcttttcaaatgcctacaagaaattcaaagcccaga
gaagaaacctccgcagaaaatagtttaaatgagccaaacaataaaaagcaacctgaatca
caaaattggagagatagaccctctagttcaggtcatagcagtaatacgtataacatcaat
ggtaaagacaatcagtcaaaatattttgataagtttgaaacaaatagatatcattctagg
aacaatcaaactgaaagtaatgtatcccacactaaaaattcaaaatatgaaaataaaaat
cgaaaatttgacaataatattaaaaataaaagcgatagtaattatcaaatgtctgataat
ggcgatactaacaatcaacgcagaggtaaatatgattcatacagcaatggtgattcaaat
agtcgttactctgataatagagatggaaaccaacgaaaatctaatgttaaagtaaagaac
aaggattctgatccccgcaccttttataataccaaagtaaattatcaagacagaaggaat
ggcaaggatacgcaaagatcgaaaggtcgtgtgggctcccagagacttggtaacgactac
aatagttatgaggatgaacaatatgccaactcttattatcaatacaaagatgaggttgtg
aagaatagcacagctagtccatcaagacacaagaaaaatcctgttccatttgcaggcaat
actgagatgactcagcgagagagactcagtgaacaattggataagggtacattagaatgt
ctagtttgttgtgagcgagtcaagcagatagatccagtatggcattgcagtaactgttac
catgtcatgcatttgaagtgtattcggaaatgggcgtccagcagcgtggttgagggtaaa
tggcgttgtccggcatgtcagaacaccagtgaagaaataccaactgagtaccgttgcatg
tgtggggcaatgcggtctccggaataccagagaggaggaaatggtgctcacacctgtggc
aaggcttgcaagaggccccggagctgtcctcatccctgcacactcctgtgtcatccaggc
ccgtgtccggcttgccaagcaaccatatctaagaaatgtggatgtggtgcagaaacccgc
tctgtgctatgcagcagcaaactgccacaggagtgtgggaggaagtgtgatcatctgctc
aattgtgaggtgcataagtgtgcccgagactgccatgagggtccctgtgacccctgccag
gagactgtcactcaagtgtgctactgtccggctgcaaagagtcgcagtgtggcttgcacg
gcggagagtagccgcgagggccagtggtcgtgcgaggcatcatgcgcccgtgtcctagcg
tgcggagcgcacgtgtgccgacgcgagtgtcacccgcctccgtgcgacgcgtgccccctg
cggcccgggaatgtacccacttgcccctgtggaaacaccagactcaaaagtggagaacgc
aagtcttgcacagaccccataccattatgcgataacatttgtgccaagcctcttgagtgt
gggcccgatggtgataagcacttctgtaaagagaagtgtcatgaaggcccatgtcgagtt
tgtcctgatacgacactggtgcagtgccgctgtggtcacttgacgcgtgacattccctgc
gctgactatccgagtcagcggaacgaggtgttctgtcagaggaagtgtaacaagaagctg
tcgtgcgggcgccaccgatgccgcgccacgtgctgtgactcggtgtctcaccgctgctcg
ctggtgtgtggccgctcactctcctgccagttgcaccggtgcgaggctctctgccacacg
ggacactgcgcgccgtgccctcagctcagtttcgaggagctgcggtgctcgtgcggcgct
gaagttatcctgccgccggtgcggtgcggcaccaagccgccggcgtgcggcgccacatgc
gcgcgggcccgggcgtgcggccacgagccgcaccactcgtgccacgcgggcgactgtccg
ccctgcgtcgtgctcaccaccaagatgtgttacgggaaccacgaggaacgcaagacgata
ccgtgctcacaagaggagttctcgtgcggtctgccgtgcggcaagccgctgccgtgcggc
aaacacacgtgtattaaaacctgccataaaggaccctgtgatactgagaaatgcaagcag
ggctgtcgagagaagcgaccgcggtgcggccacgagtgcggcagcccgtgtcacgccgac
aacggcggcgtgtgtcccgccgcgactgcgtgccgccgtcccgtcgccgtcacgtgtccg
tgcctgcggcggaaggcgacccgggcctgcgccgagaacatgcgagactacgacaagaca
ttgaacgcgctagctgcgaccagaatacaagagggcgggtcggtggacatatctgaagca
caacgatcgagcgccatgcttaaaacgctggaatgcgacgaagagtgttcgcaggaggct
agagctcggcagctggccttagcgctacagatccgcaacccggacgtgtctgctaaactg
gcgcctcgttatagcgactcgctgcgggcggcagctgcgcgagaacccgctttcgcgcaa
cacgtacacgacaagctcacagacctggtgcaactcgccaagaagtcaaagcaaaagacg
cgcgcacactcgttcccgtctatgaatcgcgccaaacgccagttcatccacgaactgtgc
gaacacttcggttgcgagagcgtcgcgtacgacgcagagcccaaccggaacgtagttgcg
accgccgacaaggagaagtcgtggttgccggccatgagtatcctggaggttctcgcgcgg
gaggctggaaaacgtcgtgtgccaggccctgtgctaaggacctctggcgccgccgcgaca
tcttctcacaccaccaagtcatcaggtggttgggctaccctcacctctacgaacgcatgg
gccatccgcagccaaccctcggcgtccaccacagctgtcaccaggacgaaacctgaaccg
aaaccggagaacaagattgactacttcgacaacccaccagacaactag
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