Leptidea sinapis (Wood White): 126969534
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Entry
126969534 CDS
T09272
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126969534
Membrane trafficking [BR:
lsin04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
126969534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
Motif
Other DBs
NCBI-GeneID:
126969534
NCBI-ProteinID:
XP_050670970
EnsemblRapid:
ENSLSNG00005021743
LinkDB
All DBs
Position
18:complement(13173375..13526156)
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AA seq
910 aa
AA seq
DB search
MKFFSIGCRRAVPKFRASMWCYLFICVSFSILYETAGSNTTGVVAENVCSIRQFQCANGK
CIPISWVCEGDNDCDDNSDENIEECKKASRTCTAAEFRCKTGSCIPMSWRCDNEKDCSDG
SDEEPGTCKVEVCGPEEFTCRGTQGECVPLTWMCDDNLDCTDGSDEKACNETCRSDEFTC
GNGKCIQQRWVCDGDDDCGDGSDEVKCPAPTCKPVSHFSCADGHCVSSRWRCDGDVDCPD
GSDEMGCATTPKVTSPCIATEFECRDRMTCVHKAWVCDGDRDCPDGGDEAPEICRGNITC
RADQFQCKDHSCIPGALYCNSEKDCPDGSDEINCTKPKPICNKKTEFDCGGGMCIPLSKL
CDGKPDCPNFEDEPRDKCGEDECAKDNGGCTQRCVNTPVGYYCDCDKGYKLVDNRTCEDV
DECVDPGACSQMCINEKGTFKCECHAGYARDPRDRTKCKATEGHPSLLFARRFDIRKISL
DHHEMVAIVNDTKSATALDYVFRTGMIFWSDVTDEKIYKAPIDEGSQRTVVIGDQLITSD
GLAVDWIYNHLYWTDTGKNHIELSDLQGNMRKILIRDRLEEPRSIALNPLDGWMYWTDWG
QVPKIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKLNTISSCNYDGSARRV
ILYSTDVLRHPFSITTFEDWVYWTDWDKTAVYRANKFTGKDVQAITATHTLQNPMVIHVY
HPYRQPDGVNHCAAVNGHCSHLCLPAPRMGPHSARVSCACPTGLRLLPDNQMCVEDNYKN
PGVVVQNSSIGLEKAKIVEGKPVASVQETPKTGTGISTSGRDAGVVAGIVVAIISLIIIL
GGLIAVVVYRHYVHRNVTSMNFDNPVYRKTTENQFAIEQNGYAPGGKLYPSTVAEEAQEP
LNTPGTNEFV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttttcaataggctgtcgacgggcagttcccaaatttcgtgctagtatgtgg
tgttatctgtttatttgtgtttcattcagtattttatatgaaactgctggttctaacaca
accggagttgtggctgagaatgtatgctccataaggcagtttcagtgtgcgaacgggaag
tgtatacccatctcgtgggtgtgtgagggagacaacgactgtgatgataattccgacgag
aatattgaagaatgcaaaaaagcaagccggacctgcacggccgcggagttccgatgcaaa
acaggcagttgcatacccatgtcatggcggtgtgacaacgagaaggattgttctgatgga
tctgatgaagaaccaggaacatgcaaagtcgaggtatgcgggcctgaggagttcacatgc
agaggcactcaaggagaatgtgttcctctaacgtggatgtgcgacgacaatctcgactgt
acagatggttcagacgaaaaagcatgcaatgagacttgtcgatctgatgagtttacgtgc
ggcaatgggaagtgtatccaacagcgatgggtttgcgacggtgatgatgattgtggtgat
ggcagtgatgaagtcaagtgtcccgcgccaacgtgtaagccagtcagccatttctcctgc
gctgatggtcactgcgtctcatccaggtggaggtgcgatggtgacgtcgactgtcctgac
ggaagtgatgaaatgggttgcgctactacacctaaagtgacatctccgtgcattgcaaca
gaattcgaatgtcgcgatcgaatgacttgtgtccacaaggcttgggtgtgcgatggagac
cgtgactgtccagacggcggtgatgaagcccctgagatctgcagaggcaacatcacctgc
agggctgaccagttccagtgcaaggatcacagctgcatacccggagctttgtattgcaac
agtgaaaaagactgtccagatggcagcgacgaaattaactgcacaaagcccaaaccaatc
tgcaataagaaaaccgagtttgattgtgggggcggtatgtgtattcctctctcgaagctt
tgtgatggcaaacccgactgtcccaacttcgaagatgagccccgtgacaagtgtggagag
gacgagtgtgctaaggacaatggcggctgcacccagcgatgtgttaacactcccgtggga
tactactgcgactgtgataagggatataaacttgtcgataacaggacttgtgaggatgta
gacgaatgtgttgatcctggtgcctgttcccaaatgtgtatcaacgagaagggtacattc
aagtgtgaatgccacgccggctatgcgagagaccctcgagaccgcaccaaatgtaaagcc
accgaaggtcacccgtcgctcctgtttgcaagacgctttgacatcaggaagattagtctg
gaccaccacgaaatggtcgccattgtcaatgataccaagtcggcgacggcgctagactac
gtgttcaggacaggaatgatcttctggagtgatgtcactgatgaaaagatatacaaagct
cctatcgacgaaggcagtcaacgcaccgtggttataggagaccagctgatcacatcggat
ggcctggcggttgactggatctacaaccacttgtattggacggatacgggcaagaatcac
atagagctgtcagatctgcagggcaacatgagaaagatactcataagggacaggcttgag
gaaccaagatctattgccttaaaccccctggatggatggatgtactggacggactggggg
caggtccccaagatcgagagagctggtatggacggatcccaccggcagaccatcgtatcg
tatgacgtcaagtggcccaacggacttacattagatctagttcggaagagggtatactgg
gtggacgcgaaactgaacactatatcatcttgcaactacgacggttcagctcgccgtgtc
atcctctactccaccgatgtgctccgacacccgttctccatcaccactttcgaagactgg
gtgtactggactgattgggacaagacggccgtgtaccgcgctaacaagttcacagggaag
gatgtccaggcaatcacggctactcacacgctacaaaacccgatggtgatccacgtatat
cacccgtaccgccagcctgatggcgtaaaccactgcgctgccgttaacggccactgctcc
catctctgtctcccggctccaaggatgggccctcactctgccagggtctcctgtgcttgt
cctacaggcttgcgactgctgcccgataatcagatgtgtgtggaagacaattacaaaaac
ccaggtgtggtggtgcaaaactcgtctattggtttagagaaagcaaaaatagttgaggga
aagcctgtagccagcgtacaagaaacaccaaagactggaacaggaatctcaaccagtgga
cgagatgctggagttgtcgctgggattgttgtggctatcatctcactcatcatcattctc
gggggcttgattgctgtggtggtgtaccgccactatgtgcaccgtaacgtgacctcgatg
aacttcgacaacccagtgtaccgcaagacgacagagaaccagttcgctatagagcagaat
ggatacgcgcctggcgggaagctgtacccgagcacggtggccgaggaggctcaagaacca
ctcaacacacctggtactaatgagttcgtgtag
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