Leptidea sinapis (Wood White): 126969888
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Entry
126969888 CDS
T09272
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126969888
03009 Ribosome biogenesis [BR:
lsin03009
]
126969888
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126969888
Spliceosome [BR:
lsin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126969888
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Pre-60S particles
Helicases
126969888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126969888
NCBI-ProteinID:
XP_050671446
LinkDB
All DBs
Position
19:complement(1996804..2014621)
Genome browser
AA seq
775 aa
AA seq
DB search
MEIEGYPGFIKTIHDNEEVEDFSEDSDEEVEYQPSKQKVKRQADFDPTFKFVSSVEEYNK
DTWDDLQKYIKRNVKQTLDEKIAKRRAHVLVNDADVGTDSEDEGQEVDELEISDDELKKD
EIKTKEKKLSKKQKLKQELQNDEPKGAKVEYDTEFFEDPPPYDEQASFYMMNLSRPLLKA
IGTLNYVHPTPVQAATIPIALMGKDICACAATGTGKTAAYMLPILERLLYKAVGDRITRV
LVLVPTRELGAQVHTVTRQLAQFTSVSVGLSVGGLDVKYQESVLRRNPDVVIATPGRLID
HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSDEVKDL
AAVSLNKPVKLFLDSNKDVAFNLRQEFVRIRKERECDREAILCALVCRTFRDRAVIFVQT
KRQAHRLHVALGLLGVKVAELHGALNQPQRLDSLKRFKEEQVDVLVATDVAARGLDIPGV
KTVVNFTLPATLEHYIHRVGRTARAGRAGVSVSLAGEGERVLVKAIVKRAKRPVKSRQVP
PDIVAKYREKLNKLETEISTILDEEYAEKQLKKMEQQTEKLEGALKSKEEKRIEPQRQRE
WFQSAKEKKEEKERLALTVHQGKDNPQKGKGKKRKHNDDSDDETPKKKNKATKYKPKDTA
EERVRREMEKVALLQSRVAKRNKKQRRIRAVEDDDERPTQGRHRAGKPKKKQTNFASDLT
DTSKSSAKRLRYDANRVQKGKPLPKGKGKPVKGMNKPKGKTFGKPQAPKKGGKRK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaaggatatccaggtttcattaaaaccattcatgataatgaggaagttgaa
gacttttctgaagattctgatgaagaagtagagtatcaaccatcaaagcaaaaagtgaaa
agacaagcagactttgaccccacatttaaatttgtttcatcagttgaggaatacaataag
gacacctgggatgatttgcaaaagtatataaaaagaaatgtcaagcagacgctagatgag
aagatagcaaaacggagggcccatgttctggtcaatgatgctgatgttggcactgactct
gaagatgaaggtcaagaagttgatgagctagaaatatcagatgatgaattaaaaaaggat
gaaatcaaaacgaaggaaaagaaattgagtaaaaaacagaagctgaaacaggaattgcaa
aatgacgaacccaaaggtgctaaagtggaatatgacacagagttctttgaagatccacca
ccatatgatgagcaggcttcattctacatgatgaacctatcacgacctttactcaaggcg
atagggaccctgaactatgttcaccctacaccagtacaggctgctaccatacctattgct
ttaatgggtaaagacatatgcgcctgcgcagctaccggtacaggcaaaactgctgcgtac
atgttgccgatactggagcgactgctgtacaaggcggtcggggatagaatcaccagggtg
ctggtgttggtgcccactcgagagttaggtgcacaggtccatacagttacacggcagttg
gcgcaatttacatcagtgtcggttggattgtcggtcggtggcttggacgtcaaatatcag
gaaagtgtcttaaggcggaacccggacgttgtaatagctactccggggcgtctgatagac
cacataagaaatactccatcatttgggcttcattctatagaggtccttgtgttggacgaa
gctgacaggatgctagacgaatacttcgcagagcaaatgaaggagataatccggcagtgc
tctcccaagcgacagaccatgctgttctcggctaccatgagcgatgaggtcaaagaccta
gccgcagtgtcactcaacaaaccggtcaaactgttccttgactctaataaagatgtcgct
ttcaacttgagacaggagttcgtgaggattcgtaaggagcgtgaatgcgaccgcgaggcg
atactttgcgcgctcgtgtgccgtactttccgcgaccgagccgttatatttgtacagact
aagagacaggcgcatcgtctacacgtggctctcggactactcggtgttaaggttgcagaa
cttcacggtgctctaaaccaaccccagcgtctagattccctgaagcggtttaaagaagag
caggtcgatgtgctggtggctaccgacgtggctgccaggggtctggacatcccgggcgtc
aagactgtcgtgaacttcacgctgcccgctactctggagcattatatacacagagtgggt
agaacagctcgagcgggtcgcgcgggagtgtcggtttcgctagcgggggaaggtgagcgc
gtgttggtgaaggcgattgttaaacgagcgaagcgacccgtgaagtcacgccaggtgcct
cctgacatagtcgccaagtacagggagaagttgaacaagcttgaaacggagatatccaca
attctggatgaagagtacgcggaaaagcagttgaagaagatggagcaacagacagagaag
ttggaaggggcgctgaaatcgaaagaagagaagaggatagaaccacagcggcagagagag
tggttccagtccgcaaaggagaaaaaagaagagaaagaacgactcgcgcttactgtgcac
caggggaaagataacccccaaaaaggcaagggtaagaaacgcaaacacaacgatgattct
gatgatgaaacgccgaagaagaaaaataaagccacaaagtataaacctaaagatactgcg
gaggagagagtgagaagagagatggagaaagttgcactacttcaatccagagtggctaaa
cgcaacaagaagcagcgcagaatacgtgcggttgaagacgacgatgaaaggccgacccaa
ggtcgacacagagctggcaaacccaaaaagaaacaaaccaattttgcatctgatctcaca
gatacatccaaatcgtctgcgaaacggttgcgttacgatgcgaatagagtccaaaaaggc
aaacccttgccaaaaggtaagggcaagccagtcaagggaatgaataagccgaaaggaaag
acgtttgggaagccacaggcgccaaagaagggtggcaaaaggaaataa
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