Leptidea sinapis (Wood White): 126970139
Help
Entry
126970139 CDS
T09272
Name
(RefSeq) uncharacterized protein LOC126970139
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126970139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126970139
03009 Ribosome biogenesis [BR:
lsin03009
]
126970139
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126970139
Spliceosome [BR:
lsin03041
]
Complex A
U1 snRNP components
U1 related factors
126970139
Complex B
126970139
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Pre-60S particles
Helicases
126970139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
126970139
NCBI-ProteinID:
XP_050671836
EnsemblRapid:
ENSLSNG00005015051
LinkDB
All DBs
Position
20:6647972..6661719
Genome browser
AA seq
830 aa
AA seq
DB search
MQYNTFHAQHPIFGPHPGERKDQFGKVPYMNRVGGDFGGPKSFVPRNNNNNMGGNKNFRP
RNDFNGVRPDFNGYKNDNPHQNDFGGPKDFRSKNFYNNPMHMRNDFDGDKASGSKGQYLN
MKDDFGGPKQGNFQKNGYGPKNYNNPGGSMRPNTVEDYMGQKMHDDYSDRKMQSRKAKHP
GDGLVKPTWDMSQLEPIQKNFYKPHANVESRTDDEVQQFRAAKEITVSGNNVPRPSQKFE
EGNFPDDILSTIKDQGWKEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIA
HQQHIQRGDGPIALILAPTRELAQQIQSVAQAYSASGFIRNTCLFGGSPKGPQARDLERG
VEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLM
WSATWPKEIQALAEDFLTDYIKVNIGSLNLSANNNIKQIIEVCEEHEKEIKLSNLLKEIA
SEKDNKVIVFVETKKKVDDIARAVRRNGHKALAIHGDKSQPERDAVLTEFRNGVTSILIA
TDVAARGLDVEDVKFVVNFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTTGDGRQARALV
AVLRETGQNPPAKLSDMARNNNSSSGRNRWQQRKENNSGSSSPRQKNNNNTWNMKMANGS
GDDNTFMAQQNFTQQPPRFSHQNQNNQGYNRQNNYQKPPPFPSPNVFDSMGTYQGGYNNG
YPNAYNNQNAYGQRQYNNNRNNGQQYRNNNSNGNKSNGSGSSFGSPPPHFAATPHYTQMH
PHHQEMIGGKYFASGVGGAGPCGYQAAVGGGMQYAHLPPGPMLYAAPVQQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcagtataacaccttccacgctcagcatcctattttcggacctcatccaggtgaaagg
aaagatcagtttggcaaagttccatatatgaacagggttggaggcgactttggaggcccc
aaaagctttgtccccagaaacaataacaacaatatgggtggaaacaaaaattttagaccc
agaaatgatttcaatggagtaagacctgattttaatggatataaaaatgataatccacat
caaaatgactttggaggcccaaaagattttaggtcaaaaaacttctacaataatcctatg
cacatgagaaatgattttgatggtgataaggcatctggaagtaaagggcaatatttaaat
atgaaagatgattttggaggacccaaacagggcaattttcagaaaaatggttatggaccc
aaaaattacaacaatcctggaggttcaatgcgtcctaatactgtagaagattacatgggt
cagaagatgcatgatgattacagtgatcgcaaaatgcaaagcagaaaggcaaaacaccca
ggtgatggattagtgaagcccacatgggacatgtctcaattagagccaatccagaaaaat
ttctacaagccacatgctaatgttgaaagccgtactgatgatgaagtgcaacagtttaga
gctgcaaaggagataacagtaagtggaaataatgtaccacggccaagtcaaaaatttgaa
gaggggaacttccctgatgatattttaagtactattaaagatcagggttggaaagaacct
actggcattcaagctcaaggatggccaatagctctatctggtcgtgatatggtgggaatt
gcatctacaggctctggtaaaactcttgcttacatgcttccagcagcagtgcatattgct
catcaacagcacatccaacgtggagatggtcctattgctcttattttagctccaacaaga
gagttggctcagcagattcaatcagtagctcaggcatacagtgctagtggattcataaga
aatacttgcctgtttggaggttctcccaaaggacctcaagctcgtgacttagaaagagga
gtagagattgttatagcaaccccaggacgacttattgattttttggagaggggaaccact
aaccttcgtcggtgcacatatttagtattggatgaagcagatagaatgttggatatgggc
tttgaaccacagattcgaaaaataattgagcaaattcgcccagatcgtcaagttttaatg
tggtcggctacatggcccaaggaaatccaagctcttgctgaagacttcttaacagattat
attaaagttaatattggatctttgaatctctctgctaacaacaacataaaacaaatcatt
gaagtttgtgaggaacatgagaaggaaataaagctcagtaatctactgaaggaaattgca
tcagaaaaagataataaagttattgtatttgttgagaccaaaaagaaggttgatgatatt
gcacgtgcagtaaggcgcaatggacacaaagctttagctattcatggcgacaagtctcaa
ccagaaagagatgcagtccttacagaatttagaaatggagtcacttcaatattaattgct
acggatgttgcagctcgtgggttggatgtggaagatgtgaaatttgttgttaatttcgac
tatccaaattcctctgaagattacattcatagaattgggcgtacaggacgttgccaacaa
tctggtacagcttacacttatttcacaactggtgatgggcgtcaggctcgcgctcttgtt
gcagtgttacgggaaacaggacagaacccacctgctaaactaagtgacatggcgcgtaac
aataatagtagttctggtcgaaaccggtggcaacaacgcaaggaaaataatagcggatca
agttcgcctcgtcagaagaacaataacaatacttggaatatgaagatggctaatggatca
ggcgatgataacactttcatggcacaacaaaactttactcaacaaccaccaagattttca
catcagaatcagaataatcaaggctacaacaggcaaaataattatcagaagccgccacca
ttcccaagccctaatgtgtttgattcaatgggcacataccaaggaggctataataatggc
tatccaaatgcttacaacaaccagaatgcctatggccaacgtcaatacaacaataatcgt
aacaatggccaacagtatcgcaataacaattctaacggcaacaagtctaatggatctggg
tcttcatttggttcacctccaccccactttgctgctactcctcattatacacagatgcat
ccacatcaccaggaaatgattggcgggaaatacttcgccagtggtgttggcggggcgggc
ccatgtggttaccaggctgcggtaggtggaggcatgcagtatgcccacttgccacccgga
cctatgctctatgctgcccccgtacaacagtaa
DBGET
integrated database retrieval system
