Leptidea sinapis (Wood White): 126970235
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Entry
126970235 CDS
T09272
Name
(RefSeq) uncharacterized protein LOC126970235 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04137
Mitophagy - animal
lsin04140
Autophagy - animal
lsin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126970235
04137 Mitophagy - animal
126970235
04148 Efferocytosis
126970235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126970235
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
126970235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
PAS_9
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
126970235
NCBI-ProteinID:
XP_050671990
LinkDB
All DBs
Position
20:complement(704609..840498)
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AA seq
978 aa
AA seq
DB search
MMVNGESLPQQCPVMGAFEETGWHAQCPVSNQWYRKPVKSFCGFDTYSGNSELSTHCYAK
SYNDCDDGSGSQQYYRQPVDTIHQNYYPQRPVQTSQFLQASLPCYQRQEWDYNSMCFNVD
GAPCQYTNVVDLEDFMNNEKRKEKSRVAARCRRTKEMQIFAEMTAALPAKKEMVEQLDKS
SVMRLAISYLRVRDIVSLLPADTEPPKLKSPKGLEEIQSELSYMKALDGFVLVLSQQGDI
IYCSDNITEHLGVSQMEIMGQSVFEFSHPCDHEEIREALRSNGAGRRDLLLRLKCTLTSK
GRNVHIKSASYKVIHMTGHMLTPDKESNNNDEEGKKDLKKPTNGALIAVGRPIPHPSNIE
VPLDTKTFLTKHSLDMKFTYTDEGLLNALGFESDELVGCSLYDYHHAADSASLVQQFKSL
FSKGQCETGQYRFLGKSGGYAWIQTQATVITDKQQKPSFVVCVNYVISGIECKDEVFAAH
QVQHADLKPAVAALPATAVPICDNPAPANGAIVGVILPEEERPIPVTELIFAPREKEMNK
GFLMFSQNKGITSEWMLNRDSLVLKDEPEDLTHLAPTAGDAHILLENSPFDMFDDFILND
NYCSLLGDDLANGSPVDSLIGDSLLSSPERQENESTGEQSSLLTELSLDAFDSARSDTDI
DDGNSPFIPTTDELPVLEPAVMWGALPDSVRQARPQPSEIQSSSPALQRLLVAPPTGPPP
QDIITNIYSEQGLIPSRNISSWDTGVKRIMKQEEEPTAKRIKRSPTPTPTQTSTSSSVLM
NLLDIQQLTSQQAAGKTLQHQVLQNTQNAARRLPMCKSMPIPVINIVEAALNKQNARANT
ASGAQMIRWPSNSMSPLSLNISSPMWYSLPTSPNYSSSLSPAQKNRVQSPYATPQSLSPA
STYSQYSPSNKLSPNPALQGYDPYLCNKMQPSPTFSIHSNEMLLDSNMPLSTSDLWPESE
MIQNTSDLLTAFDDVKLV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaatggcgaatcgttgcctcaacaatgccctgttatgggtgcgtttgaggag
actgggtggcatgcgcaatgtccagtgtcgaatcagtggtacagaaaaccagttaaaagt
ttttgcggctttgacacatacagtgggaacagtgaactttcaacgcattgctacgccaaa
agctacaatgactgtgatgatggttctgggagtcagcagtattataggcaaccagttgat
acaattcatcagaattactatccacaaaggcccgttcagacctcgcagtttttacaagcc
tcgttgccctgttaccagagacaggagtgggattataatagcatgtgttttaatgttgat
ggtgcgccttgtcagtacacaaatgtcgtggatttggaagattttatgaacaatgaaaag
aggaaggagaaatctcgtgtggcggcgcgttgtcggcgaaccaaagagatgcagatattc
gccgagatgacagctgctctaccagccaaaaaggaaatggtggaacagcttgacaagtcc
tcggtgatgcgtcttgccatatcgtacctgcgtgtacgcgatattgtgtctttattacct
gccgatacagagccacctaaactgaaaagtcctaaaggtctggaggagatacaatctgag
ctgtcctatatgaaagcgttggacggcttcgtgctagttctgtcacagcagggcgacatc
atttactgcagtgataatatcacggagcaccttggagtctcacagatggaaataatgggc
caaagcgtgttcgagttcagccacccgtgcgaccatgaggagatacgtgaagcgctgcgc
tccaacggcgcagggaggcgagacctgctgctgcgtctcaagtgtaccctgaccagcaaa
ggacggaatgtgcacatcaagtcggcctcatataaggtcatccatatgacgggacacatg
ttgactccagacaaggaaagcaacaataacgatgaagaaggcaagaaagacttgaagaag
ccaacaaacggtgccctgatcgcagtggggcgcccgataccgcacccttccaacatcgag
gtgccgctggacacaaagacattcctcaccaagcatagtctcgatatgaagtttacttac
actgatgaaggtttattgaacgccctcggcttcgaatcagatgaattggtcggttgttct
ctgtacgactaccatcacgcagctgatagtgcatcattggtgcaacaattcaagtctttg
ttctcgaagggacaatgcgaaaccggacaatatcgtttcctcggcaagagcggcggctac
gcctggatccagacacaagcaaccgtcattaccgacaagcagcagaagccgagcttcgtt
gtttgtgtaaactacgtcataagcggtatcgagtgcaaagatgaagtttttgctgcacat
caagtgcagcacgcagacttgaagccagctgtggcggccttgcctgcaactgcagttcca
atttgcgataaccctgcaccagctaacggtgccattgtgggagttattttaccagaagaa
gaacgaccaattcctgtcacagaacttatatttgcaccaagggagaaggaaatgaacaaa
ggctttctcatgttctcccaaaataagggaattacaagtgagtggatgttgaaccgcgac
agcttagtgctcaaagacgagccggaggatctgacccatttggccccaacggctggagat
gcccacatactgttggagaatagtccgttcgatatgtttgatgattttatactcaatgac
aactactgcagtttacttggcgatgatctcgcaaatggatctcccgtagattctttaatt
ggcgactccttactatcatcgcctgagcgccaggaaaatgaatcaactggtgaacagtct
tctcttttaacggaattgtcattagatgcattcgatagtgctcgatcggatactgacatc
gacgacggaaattccccatttattccaaccaccgatgaattgccagttttggagccggca
gttatgtggggagcattgccagacagtgttagacaagcgcgaccgcaaccctcggagata
caaagctcatcaccagcgctgcaacgccttttagtagcaccccccaccggtcctccaccc
caagatatcattacaaacatttactcagaacaaggactgattccgagcaggaatatatct
tcttgggacacgggcgtaaagagaataatgaagcaagaagaggagccaacggcgaaacgc
ataaagcggagcccgacaccgacgccgacgcaaacgtcgacttcctcgagtgttctcatg
aaccttctggatatacagcagttgacatcacagcaggctgctgggaaaaccctgcagcat
caagtattgcagaacacacaaaatgcagctcgtcgcctcccgatgtgcaaaagtatgccg
attcctgtcattaacatcgttgaggctgctctaaataaacagaacgcacgtgccaacacg
gcatccggagctcaaatgatacgctggccaagtaattccatgtctccgctgagcttaaat
atcagcagcccaatgtggtattcactcccaaccagccccaattacagttcatcgcttagc
cctgcacagaagaaccgtgttcaaagtccttatgcaacaccgcaatccctatcacctgct
agtacctacagccaatacagcccatcaaacaaactatccccaaacccagcccttcaaggg
tacgatccctatttgtgtaacaaaatgcagccaagcccaaccttttccatccattctaac
gaaatgcttctagattctaacatgccgttgtccacatctgatttgtggcccgaatccgaa
atgattcagaatacgagcgacctgttaaccgcatttgacgatgtcaaactagtctaa
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