Leptidea sinapis (Wood White): 126970285
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Entry
126970285 CDS
T09272
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126970285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126970285
03041 Spliceosome [BR:
lsin03041
]
126970285
03036 Chromosome and associated proteins [BR:
lsin03036
]
126970285
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126970285
Spliceosome [BR:
lsin03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126970285
Complex B
126970285
Complex C
U2 SnRNP specific factors
126970285
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126970285
TFTC complex
126970285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
126970285
NCBI-ProteinID:
XP_050672066
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All DBs
Position
20:4313809..4324179
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AA seq
1217 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIVISRGKILELLRPDPNTGKVHTLVKVEIFG
VIRSMMAFRLTGGTKDYIVIGSDSGRIVILEYIPAKNNLEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDDDMVTEIKLKYFDTVPPATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILASQVADLTGEDT
PQVYLACGRGSRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDFDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLSDNTVRIISLDPADCLSPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSSEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQNFVSLDYTPRKF
LINNETNHIIVLETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
ILPENVFSSPKAGAGMWASQIRVVDMGISGGQPSTLFKLPLEQNEAAVSLCLIRWAAHGE
HGVTHLVVGVAKDMILSPRSCTEGSLHVYKVYNIGKLELVHKTPVDEYPGALAAFNGRLV
AGVGRMLRLYDIGRRKLLRKCENRHIPNLIIDIKATRQRIFVSDVQESVFCVKYKRRENQ
LIIFADDTNPRWITNTCILDYDSIAMSDKFGNIAIMRLPQSVTDDVDEDPTGNKALWDRG
LLNGASQKGDVVVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDF
FQHLEMHMRSENSPICGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLERT
PAEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacctatataacttaacgttgcaaggttcaacagccataacccacgctgttcatggc
aatttttccggtacaaagcaacaagagatagttatatctcgcggtaaaattctagaactc
cttcgtccagatcccaatacaggaaaagttcatactcttgtgaaagttgaaatattcggc
gtaatccgatcaatgatggcgtttcgcttaaccggcggcaccaaagattatatagtcatt
ggttctgactctggcaggattgtgatattagaatacataccagcaaaaaataatttggaa
aaagtacatcaagaaacttttggaaaatcaggatgcaggagaattgtacctggacagtat
ttagctatagatcctaagggcagagcagtgatgattggggctattgaaaagcagaaacta
gtctatattttaaatagagatgcggaagctaggctaacaatttcatcacccctagaagct
cacaaatccaatacacttgtttatcacatggttggtgttgatgtgggttttgaaaaccct
atgtttgcttgccttgaaattgattatgaagaagcagactctgatccaacaggtgaagct
gctcaaaaaacccaacagactttaacattttatgaattagatctgggcttaaatcatgtt
gtcagaaagtattcagaaccccttgaagagcatgctaactttcttattacggtacctggt
ggcaatgatggaccatctggtgtactcatctgctcagaaaactacctcacatacaaaaat
ttgggtgaccaacatgacattagatgtccaatacctaggagacgtaatgacttggatgac
ccagaaagagggatgatttttgtatgttctgcaacacacaaaactaagtcaatgttcttt
ttcttggctcaaactgagcagggggatatctttaaaattacaattgagactgatgatgat
atggtgactgaaattaaactaaaatactttgatactgtacctccagcaactgccatgtgt
gttctgaagactggattcttgtttgttgcttgtgaatttggaaaccattacttatatcaa
attgctcacttgggtgatgaagatgatgagccagaatttagttctgccatgcctctagaa
gaaggtgatacattcttctttgcaccaagaccattgaggaatctagttctagtggatgag
ttggactccttatcaccaattttagcaagccaagtagctgacttaactggtgaagatact
ccacaagtttacctagcatgtgggagaggatcaaggtcatctttgagagctctacgacat
ggtttagaagtagcagaaatggctgtctctgaattacctggttcaccaaatgctgtatgg
actgtacgtcgtcataaagatgacgactttgattcttacatcatagtatcattcgtaaat
gccactcttgtgctctctattggtgaaacagtggaagaagtgacagactctggatttctt
ggaacaacacctaccttaagctgtcacgcattgggaagtgatgccctggtgcaagtatat
cctgatggtattcggcatattcgtgctgacaaacgggtcaatgaatggaaagcccctggc
aagaagtctattgtcaaatgtgctgtcaatcagagacaagttgttattgctctaactggt
ggtgaattagtttactttgagatggatccaactggtcagttaaatgagtacacagagaga
aagaaactatcatcagatgtatcttgtatggcattgggatctgttgcaacgggagaacaa
agagcttggtttttggctgtaggcttgagtgacaatactgtcagaattatatcgttagat
cctgcagattgcctttcaccaagatcaatgcaagcattaccagcaagtcctgaatcatta
tgtattgtagatcagccttttgaatcaggagctaaatctgccttacatttaaatattggt
ctgagcaatggtgttttattgagaacaacactggattctgttagtggtgacttagcagac
acaagaactaggtatttggggtctagacctgtcaagctgtttaaagtaagagttcaatca
tcagaggctgtgttggctgtatcatcaagaacctggcttggatatcagtatcaaaaccga
tttcatttaaccccactttcctatgaatgtcttgaatatgctgcaggctttagttcagaa
caatgtacggagggtattgtcgctatttcgtctaacacactaagaattttggctttggaa
aaattaggagcagtattcaatcaaaattttgtatcactagactatactccaaggaagttt
ctaataaataatgaaactaaccatattattgtcctggaaactgatcataattcttacact
gaggaaatgaagaaacaaagaagagtacaaatggcgcaagaaatgcgtgaagccgcagct
ggtggtggtcctgaagaacagcagttagccaatgagatggctgatgcattcctatctgat
attctacccgaaaatgtattttcttcaccaaaagcaggagcaggtatgtgggcgtcacaa
attagagtggtagatatgggcataagtggtggacaaccgtctacattatttaaactgcct
ttagaacaaaatgaagcagctgtttccctgtgtctcattcgctgggcggcacacggagaa
catggtgttactcacttggttgtaggagtagccaaagacatgatattatcaccacgatca
tgtacagaaggcagtttacatgtttacaaggtttataatatagggaaattagaattagtt
cacaaaactccagttgatgaatacccaggagctcttgcggcatttaacggccgacttgtg
gcgggagtcgggcgaatgctgcgtttgtatgacattggtagaagaaagcttttgcgcaag
tgtgaaaacagacacattccaaacctaataatagatattaaagcaacaagacaacgaata
tttgtatctgatgtacaagaatcagtattttgtgttaaatataagagaagagaaaatcag
ttgattatatttgctgatgacactaatccaagatggataacaaacacatgtattttggat
tatgattcaattgccatgtctgacaaatttggaaatattgcaatcatgaggcttccacag
tcagtaactgatgatgtagatgaggatccaacaggaaataaagcactttgggatagaggt
ttactgaatggtgcatcccagaaaggtgatgtggtcgtaaatttccatgtgggcgaaact
gtaacttcattacaaagggccactctaatccctgggggctctgaagcgctattatatgca
acaataagtgggtccttaggtgttctattacccttcacatccagagaagaccatgatttc
ttccaacacttagagatgcacatgagaagtgaaaattcacctatatgtggaagagatcat
ttatcatttaggagttattattacccagttaagaatgtgatagacggtgacttgtgtgag
caattcaactcgttggagcctgccaaacagaaggcgattgccggtgatttggagagaaca
cccgcagaagtttcaaagaaattagaagacataagaactagatacgcattctaa
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