Leptidea sinapis (Wood White): 126970303
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Entry
126970303 CDS
T09272
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126970303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126970303
03009 Ribosome biogenesis [BR:
lsin03009
]
126970303
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126970303
Spliceosome [BR:
lsin03041
]
Complex A
U1 snRNP components
U1 related factors
126970303
Complex B
126970303
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Pre-60S particles
Helicases
126970303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
DUF6426
Motif
Other DBs
NCBI-GeneID:
126970303
NCBI-ProteinID:
XP_050672098
LinkDB
All DBs
Position
20:complement(6047547..6051573)
Genome browser
AA seq
534 aa
AA seq
DB search
MSGNWSNNRSNGGSKFGGKFNSGGGGGSRFGGGGSGGKFGGGGFGNKKEFTGGQNMRRPN
WDSMSLQPFNKDFYNPPPSVLNRSPYEVEEYRNQHEITISGVDVPNPIQKFDEANFPDYV
MQGISNMGYNDPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYILPAIVHINNQPPVRRG
DGPVALVLAPTRELAQQIQQVATDFGNAAYVRNTCIFGGAPKREQARDLERGVEIVIATP
GRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKE
VKKLAEDYLGDYMQINIGSMQLSANHNILQIVDICQEHEKENKLNTLLQEIGDGHDAGTK
IIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDDVLNQFKQGRASILVATDVAAR
GLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA
NQIVSPQLQSMADRCGGGGGGWNRNRYGGGSFKRGGNFGRGGNGGGAHRRFNDY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaattggagcaataatagaagcaatggtggatctaaatttggaggaaaattc
aatagcggtggcggcggcggcagtagatttggcggtggtggaagtgggggcaaatttggt
ggcggaggatttggaaacaaaaaagaatttactggtggccaaaatatgagacggcctaat
tgggattccatgtctctacaaccattcaataaggacttctacaatccaccaccatctgta
ctcaatagatcaccatatgaagttgaggaatacagaaaccaacatgaaatcaccattagt
ggtgtagatgtcccaaatcctattcaaaaatttgatgaagctaactttcctgattatgtg
atgcaaggaattagtaatatgggctacaatgacccgacacccattcaagctcagggctgg
ccaattgctatgtctggcaaaaatcttgttggcattgcccaaaccgggtctggtaaaaca
ttggcctatatattaccagctatagttcatattaataatcaaccgccagtcagacgcggc
gatgggcccgtggcactcgtgctagccccgacacgtgagctggcccagcaaattcaacag
gttgcaactgactttggcaatgctgcatatgtaagaaacacgtgtatatttggtggggca
cctaagagggaacaagctcgtgatttagaaaggggtgtggaaattgttattgccactcct
ggtagattaatcgatttcctggagaaaggtacaacaaatcttcaacgttgtacatacctt
gtacttgatgaagccgaccgcatgttggacatgggttttgaacctcaaattaggaaaatt
attgaccaaatacgcccagacagacaaactttgatgtggtctgcaacatggcctaaggaa
gtaaagaaactagctgaagattaccttggtgattacatgcaaattaatatcggatcaatg
caattgtcagcaaaccacaatattttacaaattgtagacatttgtcaagaacatgaaaaa
gaaaacaaattgaatacattactacaagaaattggagatggccatgatgcaggaactaaa
ataattatatttgttgaaactaagagaaaagtggagaatatcacacgtaatattagacga
tatggatggcctgctgtatgtatgcatggtgacaaaacacaacaagaaagagatgatgta
ttaaatcaattcaaacaaggcagagccagtattcttgtggccacagatgttgctgcccgt
ggacttgatgtggatggaattaaatatgtcataaattttgattatcccaattcctctgag
gactacattcaccggattggtagaactggaagatcaaaatcaaaaggaacctcttatgcc
ttttttacaccttcaaactctcgacaagctaaagatttggtttcagtgcttcaagaagct
aaccagattgtaagtccccaattgcaatcaatggctgacagatgtggaggtggaggtggt
gggtggaacaggaaccgatatggaggaggttcttttaaacggggtggaaactttggaagg
ggtggcaatggaggaggagctcaccggagatttaatgactactaa
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