Leptidea sinapis (Wood White): 126970305
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Entry
126970305 CDS
T09272
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126970305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsin03041
]
126970305
03009 Ribosome biogenesis [BR:
lsin03009
]
126970305
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126970305
Spliceosome [BR:
lsin03041
]
Complex A
U1 snRNP components
U1 related factors
126970305
Complex B
126970305
Ribosome biogenesis [BR:
lsin03009
]
Eukaryotic type
Pre-60S particles
Helicases
126970305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
126970305
NCBI-ProteinID:
XP_050672103
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All DBs
Position
20:complement(6036859..6042558)
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AA seq
513 aa
AA seq
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MAFNLFKNILKQRNLSLVVYSGVKQLSTAPLQKSSRHASRIYNLKNNEAILLSPKVILNE
YNKHCYSTNVAPSTDEEYINEHNITIIGKNVPSPFRDIDTSGFPDYIKNFLKLHGITNPT
VIQSQGWPVALEGNNFVGIAQTGTGKTLAFLLPAVVHLKEKEAKRGRGPRVLVLAPTREL
ARQIEKVAKQFETSLNIRCLCVYGGANRSVQAKELRSGIDILIATPGRLNDFIDSKETSL
SRCTYVVLDEADRMLDMGFEPQIRKALEGVPLERQILMFSATWPKEVQYLAKDYLGEFIQ
VNVGSTDLTANHNITQHVHIVEHHSKMDKFKEIMHAVSGDGFGKILVFTNTKRFVDNLEL
TLKRNGWPAVGIHGDKTQYQRDVIINKFRSGRTNILVATDVAARGLDVDGITHVINYDFP
QTSEDYIHRIGRTGRSQNKGTSHTILTSDDGRNAKSLLAVLKEANQEIPQELEDLARDFD
HTKEIQRKSKQQNRGFNFRNTRKFGNFHRKSFY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaatttatttaaaaacatattaaaacaaaggaatttgtcgctagtggtatat
tctggtgtaaaacaattatcaactgcacctctacaaaaaagtagtcgacatgcaagccga
atttataacctgaaaaataatgaggcaatattattgtcacctaaagtgatcctcaatgaa
tataataaacattgttattccacaaatgttgctccaagtacagacgaggaatatattaat
gaacacaacataacaattattggaaaaaacgttcccagtccatttagagatattgataca
agtgggtttccagattacattaaaaactttctgaaattacatggtattacaaatcctact
gttatacaatctcaaggatggcctgtcgccttagaaggcaataattttgtaggtattgca
caaactggtactggtaaaacattggcattcctgttaccagcagtagttcacttgaaagaa
aaagaagctaaaagaggtagaggccccagggttttagttttagctcctactagagaactg
gctaggcaaatagaaaaggtagcaaagcaatttgagacatcattgaatattcgttgtcta
tgtgtgtatgggggagcaaatagatcagtgcaagcaaaggaacttagatctggaatagat
atcttaatagctacaccaggcaggctaaatgacttcattgacagtaaggaaacaagtcta
tccagatgtacttatgttgtattggatgaggctgatagaatgttggatatgggatttgag
ccacaaataaggaaggcattagaaggtgttcctcttgaaaggcaaatattgatgttctca
gctacatggcccaaggaagtacaatatcttgcaaaagattacctgggtgaattcattcaa
gtgaacgttggctcaactgatttaacggccaatcataatatcacacagcatgtccacatt
gtggaacatcattctaaaatggacaagttcaaagaaatcatgcatgcagtatcaggggat
ggttttggtaaaatcctagtgtttacaaacacaaagagatttgttgataacttagaattg
acactaaagagaaatggttggcctgctgttggaatacatggtgacaagacacagtatcag
agagatgtcatcatcaataaattccgaagtggtaggactaacatacttgttgccacagat
gttgccgctagaggattagatgttgatggcataacacacgtaataaactatgatttccca
caaacatctgaggattacattcatcggattgggcgcactggccgttctcaaaacaagggc
acttcacatacaatactgaccagtgatgatggaaggaatgctaaaagcttattagcagtt
ctcaaagaagcaaatcaggaaatacctcaagaactggaagatctggcgcgtgactttgat
catacaaaggaaatacagcgtaagtcaaagcagcaaaataggggtttcaacttcagaaat
acaagaaagtttggtaattttcatagaaaaagtttttactag
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