Leptidea sinapis (Wood White): 126970401
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Entry
126970401 CDS
T09272
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126970401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsin03000
]
126970401
03021 Transcription machinery [BR:
lsin03021
]
126970401
03036 Chromosome and associated proteins [BR:
lsin03036
]
126970401
Transcription factors [BR:
lsin03000
]
Eukaryotic type
Helix-turn-helix
ARID
126970401
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126970401
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126970401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
126970401
NCBI-ProteinID:
XP_050672180
LinkDB
All DBs
Position
21:5008161..5152734
Genome browser
AA seq
1646 aa
AA seq
DB search
MAATQAESQRSETNVDQGTPEQLNESRNALLQNGTDKSVGRVPLDGVVNTKSKSPMSVEA
GQHRDAGEVPGLERGGERPGPEQYGAYRYAEGADPYFAQRPGFAGKPRPPPQQRFFPGQA
VSQAPGPTPTLNSLLQSSGAPPHRYPNSYEQPPAGYGPNPGWPPPRPMPPYNPQGSPYRN
STPPRGYGPPYGAGAPGGPQQPPGAYGPPGSYQPRYAPPPGAPNSRPPFSPHQGYERGGS
PQPPSPGSLSPNQDAQHPPHLAAAAQPPPHQGYAPQPRPPQPSTPNAHEQDSDLTGPNSN
DSGGSGGAGRSTTPHLRPTPSPTGSSGSRSMSPAVGTQNVPMPPRPSSSLSDGGGPTVRA
GAPGAGGPQAGAPLLPAPYPPHGPYKPAPYPPQPYGYPPPRNHHPYPYGYRPAPPHPSQH
YPPMKQAGVGRHMGPPGEAMGPPTAPGEAHDNGPAPPATALVTTGPDGALDEASQQSTLS
NASAASGEEAVGPAKPRKEYGSAAPSPSPGGGSHSHDDYDPAPSPWPRPPSSPVFNSHIA
PESYRTKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYL
LVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQP
IINQVEASTKKKSGKANNTANAGGSNNTEQFSAATAAPPAPMDGYPAHYAPYPPQPATQS
GPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRGYGSGEY
RYAGYGGQYRAGAPGPGAAPGPAPAAPAAAGGAPPAQPYPDYYRAPHPHQHPPQHPPQHP
PQHPPQHPPQHPSQHPSQHPPQHPPQHPPQHPPQHPPHSPQQPHEMAGCGNLMSSQLARQ
LVAPLPNASRPYYGGGKGAPPPVNAGPPGAAGAPRRHPDFAKSEGYNAPQPGAPSPAGPR
FGAAWGPAFPRASSPAWRPPHHAPMPHQHQPGWPPQHQQHQAYHAPGGSTGVGQLKRELI
FPAECVEATVPAPEKRRRLTKGDVAPVDAWRIIMALKSGLLAETCWGLDILNILLFDDNC
IPYFGLHNMPGLLDLLLEHFHRSISDVFDSPPTQNEPWYAPPPSPEPPKPSTKRFDPPDP
NDRIQVISGENYTLQSRRRVPVIFASKTDDESLFAPEDPEPDSNVDDIMEPWQAGDATSS
AHMMSCFRAEFVYLPFARVLPGDRRASPPATPASTRSEDPSDPPAPPDLSDPPPDPEETT
HTTDEGDNLESEPMDIEPERKPTLQIKDPAGVLKRRRLEDYEDECYTRDEPSLNLISETR
DALAKRCIALSNILRGLTFVPGNEAEFARSGAFLALAGKLLLLHHEHAPRAARARAYERA
ARDEADAGASCSSLRGEGEWWWDTLAQLREDALVCCANVAGGVALRGLPEAVARPLLDGL
LHWAVCPAAVAGDAPPAASPASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIGALC
AGLARDLCRPERPVLREFAVNLLHYLAGAGGSAAREVATHAPAVAQLVAFIERAEQTALG
VANQHGVGALRDNPDAMGTSLDMLRRAAATLLRLARHPENRPLIRRHERRLLSLVMSQIL
DQKVAHELADVLYHCSRSECDEVREE
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacgcaggccgagtctcagcgaagcgagacgaacgtagatcagggtacacca
gagcagctaaatgaatctcgaaacgctcttttacaaaacggcactgataaatctgtcggg
cgcgttccgctcgatggcgttgtgaatacaaagagtaaatcgccgatgtcagtcgaggca
ggccagcatagagacgcaggagaggtgccaggtctcgagcgaggcggagaaaggccaggg
ccggagcaatacggagcgtataggtacgcggaaggcgcggatccatattttgctcagcgg
ccgggttttgccggcaaaccgagacctccgccacaacaacgattcttccccggtcaggca
gtgtctcaagcccctggccctacacccactctcaactcattgcttcagtcaagtggagcc
ccaccacaccggtatcctaacagttatgagcagccccccgcaggctatggacctaatcca
ggatggccaccaccaaggccaatgcctccttacaatccccagggaagtccatatagaaat
tcaactccaccacgaggctacgggcccccgtatggtgcgggtgcgcctggtggtcctcag
cagcccccgggtgcctacggacctccggggtcgtaccagccgcggtacgcaccaccgcca
ggcgctcccaactcgagaccgccgttctccccccatcagggatacgagcgcggtggctct
cctcagccacccagccccggctcgctgtcgcccaaccaggacgctcagcatccgccgcac
ttggccgcggccgcgcagccaccgcctcatcagggatatgcaccgcagccaaggccgccc
cagccatccacaccgaatgcgcatgagcaggactcggatctgaccgggccgaacagcaat
gactctggcggcagtggcggcgccgggcgctccaccacgccgcacctgaggcccacgccg
agccccaccggctccagcggctcgcgatccatgtcaccggctgtcggtacgcagaacgtt
cccatgccaccgcggccgtcatcgtccctgtcggacggcgggggccccacggtgcgcgcg
ggggcgccgggcgccgggggcccgcaggccggggccccgctgctgccggcgccgtacccg
ccgcacgggccctacaagccggcgccctacccgccgcagccctacggctacccgccgccg
cgcaaccaccacccctacccgtacggctaccgccccgcgccgccgcacccctcgcaacac
tatccgcccatgaagcaggcgggtgttggacggcacatgggtccccccggcgaggccatg
ggtcctcccacggcgccaggcgaggcgcacgacaatggacccgctccgcccgctactgca
ctcgtcaccactgggcccgacggtgcgctcgacgaggccagccaacaaagtacactcagc
aatgcatcagcagcgtcgggtgaggaggcggtcgggcccgccaagccgcgcaaggagtac
ggcagcgcggcgccctcgccctcgcccggcggcggctcgcactcgcacgacgactacgac
cccgcgccctcgccctggccgcgcccgccctccagcccggtgtttaacagtcacatagcg
ccggagtcctacagaacaaagaagtccgactcgctgggcaagctgtacgagatggacgac
gcgcccgagcggcgcggctgggtggagcggctgctggccttcatggacgagcgccgcacg
cccatcgccgcctgccccaccatctctaagcagccgctggacctgtaccgcctgtacctg
ctggtgcgcgaccgcggcggcttcgtcgaggttacaaagaataagacatggaaagacata
gctggtttgctgggcattggagcgtcatcgtcggccgcgtacacactccgcaagcactac
acgaagaatctactcgcgtacgagtgtcacttcgaccgcggcggcatcgatcctcagccg
attatcaaccaggtcgaggcctccaccaagaagaagagcggcaaggctaacaacacggcc
aatgcaggtgggtccaacaacacggaacagttcagcgcggcgaccgcagcgccgccagcg
cccatggacggctaccccgcgcactacgcgccctacccgccgcagcccgcgacgcagagc
gggcccgggggcgacaacctggccgcctccaacccgttcgacgagccgcccgggcctcgg
agaccgccaggttaccaacaaggctatggctatgagtatggatcaccatatccttcaaat
aggcctgtatatccaccgtatggtcctgagggtgacaggggctacggttccggcgagtac
cgctacgccggctacgggggccagtaccgcgcgggggccccggggcccggagccgcgccg
gggcccgcccccgctgcccccgcggccgccggcggcgcgccccccgcgcagccctacccg
gactactaccgcgcgccgcacccgcaccagcacccgccgcagcatccaccgcaacacccg
ccgcaacatccacctcaacatccacctcagcacccgtcacagcatccgtcgcagcatccg
ccgcagcatccgccacaacatccgccgcaacatccgccgcaacatccgccacactcgcca
caacaaccgcacgagatggctggttgcggcaacctgatgagctctcaactcgcgcgccag
ctggtcgccccgctgccgaatgcgtcgcgaccctactatggtggtggcaaaggtgcacct
cctcctgtgaatgcggggcctccaggcgctgccggggcacctcgtcgccacccagacttc
gcaaaatccgagggctacaatgcaccacagcctggtgctcccagtccggcggggccccgg
tttggggccgcctggggcccggcttttccccgcgcgtcatcgcccgcatggcgaccgcct
caccatgcgccgatgccgcatcagcaccagccgggatggccaccgcaacatcagcaacac
caggcttatcatgcgccgggaggttcaacgggtgtcggacaattaaagcgagagttgata
ttccctgcggagtgcgttgaggcaacggtaccggcgcctgaaaaacgacggcggttgaca
aagggagatgtcgcacccgtcgacgcatggcgaattatcatggcgctcaagtccggccta
ctcgcggaaacttgttgggggctcgacatactcaacattctcctgtttgatgacaattgc
ataccatactttggtctccataatatgccgggtttgttagaccttctcctagaacacttc
catcgaagcattagcgacgtgttcgactcgcccccgacgcagaatgaaccatggtacgcg
ccgcctcccagtcccgaaccgcccaaaccctcaacgaagcgtttcgatccaccagatcct
aatgatagaatacaagttataagcggagagaactacacactacaatcccgccgtcgggtc
cccgtcatattcgcgagcaagactgatgacgaatctctattcgcgccagaggaccccgaa
ccagactccaatgtagatgacataatggagccttggcaggcgggtgacgcgacgagctcg
gctcatatgatgtcgtgtttccgcgccgagttcgtctacctgcccttcgctcgggtcttg
cccggagacaggcgagcatcgccgcccgcaacacctgcgtcaacgcggtccgaagatccc
agtgatccccccgcacctcccgacctcagcgacccgccccccgaccccgaagaaacaacg
cacactactgacgaaggggacaacctagaatctgaaccgatggatatcgagcctgaacga
aaaccaacgttacaaatcaaagatcccgcaggggtgctcaagcggagacgtctagaggac
tacgaggacgagtgttacacgcgcgacgagcccagcctcaacttgataagcgaaacgcga
gacgcgctcgccaagcggtgcatagcgctgtccaacatcctgcggggactgacgttcgtg
cccggcaacgaggcggagttcgcccgctccggtgccttcctcgcgctggccggcaagctg
ctgctgctgcaccacgagcacgcgccccgcgcggcgcgggcgcgggcctacgagcgggcg
gcccgcgacgaggcggacgccggcgcgagctgctccagcctgcgcggcgagggcgagtgg
tggtgggacacgctggcgcagctgcgcgaggacgcgctggtgtgctgcgccaacgtggcg
ggcggcgtggcgctgcgcgggctgcccgaggccgtggcgcgcccgctgctggacgggctg
ctgcactgggccgtgtgcccggccgccgtggccggcgacgcgccgcccgccgcctcgccc
gcgtcgccgctgtcgccgcgccggctggcgctggaggcgctctgcaagctgtgcgtgacg
gacgccaacgtggacctggtgctggccacgccgccgcgcggccgcatcggcgcgctgtgc
gccggcctggcgcgcgacctgtgccggcccgagcggcccgtgctgcgcgagttcgccgtc
aacctgctgcactacctggcgggcgcaggcggctcggctgcgcgcgaggtggcgacgcac
gcgccggccgtggcgcagctcgtggccttcatcgagcgcgccgagcagacggcgctgggc
gtggccaaccagcacggcgtgggcgcgctgcgcgacaaccccgacgccatgggcacgtcg
ctggacatgctgcgccgcgccgccgccacgctgctgcgcctggcgcgccaccccgagaac
cgcccgctcatccggcgccacgagcggcgcctgctgtcgctcgtcatgagccagatcctc
gaccagaaggtggcgcacgagctggccgacgtgctgtaccactgcagccggagcgagtgc
gacgaagtgcgggaagagtga
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