Leptidea sinapis (Wood White): 126970522
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Entry
126970522 CDS
T09272
Name
(RefSeq) regulator of gene activity
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126970522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126970522
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126970522
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126970522
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GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
126970522
NCBI-ProteinID:
XP_050672440
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Position
21:2602434..2621399
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AA seq
413 aa
AA seq
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MANLNFQQAPRTLVTGGVGGRVGSGLVGGVSGHVTPTFGGPLSPGRSGSTAMPGGAPPSM
ASRSTLFGQRAFADRRVPIPTPLSQANTNSMSSITNLTRFNSNNYHSVFGEGGDTSTPPL
LDLSEFPSLTTRGAGDQAPTAAPPPPGTKPYVGMLKQPMTEQSEFMMSSEDFPALPGTSS
AGTSVVGTLQQSSVPHQVLHDFNHTPEPKPQRKGIQTSPEGKVTNIPDTMIPNQFGIVGL
LTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNIYLSFAGPWADSACRPQDMDHNVPPE
YLINGSIREKLAPVRLNRYKEDLLFYLFYSYVGDVLQIAAAAELYSREWRYHMEEKVWIS
QAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRPQLPAHVLT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaattttcaacaagcacctagaacccttgtaacgggtggtgtaggaggc
cgtgttggttcaggtttagtgggtggagtgtcgggtcatgtgacacccacatttggtggc
ccactgtcgccagggcgcagtgggtccaccgctatgccagggggtgcacctccctctatg
gcatcaagatcaaccttatttggacagagggcatttgcagaccgaagagtacccatacca
acaccactgtcacaagcaaacacaaactctatgtccagtatcacgaatttgacacgtttc
aacagtaataattaccattctgtgttcggcgaaggcggcgatacgtcgactcctccgttg
ttagacttaagtgagtttccgtcgctgacgacgcgaggggctggtgaccaagcgcctacg
gccgcccctccacctccaggaactaaaccttatgtgggtatgttgaagcagccaatgact
gagcagtcagaattcatgatgtcttctgaagattttcctgcattgcccggcacatcaagt
gcaggtacttcagtagtgggtaccttacaacagtctagtgtacctcaccaagtcctgcac
gacttcaaccatacacctgagcctaagccccagcggaagggcatacagacttctcctgaa
ggaaaagtaacgaatatacctgacactatgataccaaaccaatttggtattgttggactg
ttaactttcatcagggcggcggaatcagatcctagcttagtgtccctcgcattgggtcag
gacctcacagcacttggacttaatctcaactcaccggacaacatatacttatcatttgct
ggaccttgggcggatagtgcctgcaggcctcaggacatggaccacaacgttccacctgag
tatttgataaacggttcaatcagagaaaagcttgcgccagtaagattgaatcgatacaaa
gaagatttacttttttatctattttattcctatgttggagatgtactacaaatcgccgca
gcagctgaactatatagccgcgaatggcgatatcacatggaggagaaggtgtggatctct
caggcgcccggcatgccaatggtcgagaagacatcgacgtacgagcgaggcacatattac
ttctttgacgcgcataattggcgcaaggtggcgaaagaatttcatctagattatagcaag
ctggagggacggccgcaactgccagcccacgtcctcacctag
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