Leptidea sinapis (Wood White): 126970586
Help
Entry
126970586 CDS
T09272
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126970586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126970586
03036 Chromosome and associated proteins [BR:
lsin03036
]
126970586
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126970586
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126970586
PBAF complex
126970586
GBAF(ncBAF) complex
126970586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
126970586
NCBI-ProteinID:
XP_050672536
LinkDB
All DBs
Position
21:2339928..2399441
Genome browser
AA seq
956 aa
AA seq
DB search
MTTLGPKKDGGPNVEFFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNATDPPFLRLPMKVFMDMKAGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMEIESALLSAEIIRSPCIYIRPEVDKTTANKVKDIISNHQVEICIDEDDAT
HIIYPAVDPSEEEYARPVFRRGNNVLIHWYYFPDSHDTWTQTDLPVDVPESANWECSRPE
AWRVSATWVLDLPHYNEWLNEEDYEVDSHGKKKAHKLRLSVDDLIPGNEPSAKSKKGKRK
RSPSPPPQKHSKRKSRGAKKRENDMEEEEDNASRDNTDVAPTPEVEKQPEPPVVVPVPAA
PSTSSTEPASGASAGASAATATSGEASAPQIDQQDDSQGKHSDSNTQETITKEELEDNVT
DQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPT
EYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQVEADVRPTAMGPPPTSHFHVLSDTP
SGLQPLQARAAGQAQPRPAENAAVPKVEAGLPNGSDAATPQAPVPPQPAVKVEGVKTEPT
IELGTAPGLKLDQYRVTATRGREWTEQETLLLLEGLELHRDDWNRVAAHVGSRTHDECIL
HFLRLPIEDPYLEDSGVLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRIATKATRAAMD
EFAAIKDEVPAAMMEAHVKAAGSLGPSAALASTGIAGTTPDPPEKKDSGDVKAEPMEVEG
EGEAKVKEEPAEPTTEKDAKEDDGPQQQEQPTVVDAKLQSAAAAALAAAAVKAKHLAGVE
ERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLK
AAEFRARNQALQRLQAETGGAVNLGSGANAVAVSGAPAGGTASEPTQDATAPHHHP
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgactactttgggtcctaaaaaagacggaggcccaaatgtggaattctttcaatcgccg
gaaagcttagcccaattcgatcaaattcgtgtttggctgcaaaagaactgtaaaaagcat
gtccagacagatccaccaactaaagagggattggcgcagttggtgattcagctcatacag
taccaggagaacaaattggggaaaaatgccaccgatcccccatttcttcggcttccaatg
aaagtgttcatggacatgaaagcgggcggctctctgtgcacggtcctggccaccatgttc
cgcttcaagtcggagcagcggtggcgcaagtttgacttccaggtcggtaagaatccgtcc
cgcaaggacctcaacgtccagatgatgatggagatagagagtgccctgctgagcgcggag
atcatccgctcaccctgcatctacatacggccggaggtggacaagacgaccgctaacaag
gtcaaagatatcatcagcaatcatcaggtggagatatgcattgacgaagatgacgccacc
cacataatatacccggcggtggacccttctgaagaggagtacgcacggcccgtgttccgg
cgcggcaacaacgtactgatacactggtactacttccccgacagccacgacacgtggacg
cagactgacttgccggtggacgtgcccgagagcgccaactgggagtgcagccggccggag
gcgtggcgagtatcggccacgtgggtactggacctgccgcactacaacgaatggctcaac
gaggaggactacgaagtcgactcgcacgggaagaagaaggcacataagctgcgcctgtct
gtggacgacttaataccgggcaacgaaccctcggccaagagtaagaaaggcaagaggaag
cgatccccctctccaccgccgcagaaacacagcaagaggaagagtcgtggtgctaagaaa
agagagaacgatatggaagaagaagaggacaacgcctccagagataacactgacgtcgcg
ccaacgccggaggtggagaaacaacctgaacccccagtagtggtgccggtgccggcagcg
ccaagcacgtcgagcacggagcccgccagcggtgcgagtgcgggcgcgagcgcagcgacc
gccaccagcggggaagcgagcgcgccgcagatcgaccaacaagacgactcgcagggcaaa
catagtgactctaacacacaggaaacaataacaaaagaagagctagaggacaacgtgacc
gaccagactcatcatatagtagtaccgtcctactcggcgtggttcgactacaactctatc
cacaccatcgagaagcgagcactgtccgagttctttaacgggaagaacaaatcgaaaacg
ccagagatatatctcgcttacaggaacttcatgatcgacacataccggctgaaccccact
gagtacctcacgagcaccgcgtgtcgccgcaacctagcgggcgacgtgtgcgccatcatg
cgggtgcacggcttcctggagcagtggggacttgtcaactaccaggtggaagcggacgtc
agaccaacagccatgggtcctccgcccacgtcgcacttccacgtgctgtcggacacgccc
agcggcttgcaaccactccaggcccgcgccgccggacaggcacaacccaggccagctgaa
aatgcagcggtacccaaagtggaggccggcctgccgaatggatctgacgcggccacgccg
caggctccggtgccgccgcagcccgccgtcaaggtggagggggtgaagaccgaacccacc
atcgaactgggcaccgcgcctggactgaaactagatcagtaccgcgtgacagcaacgcgc
ggccgcgagtggaccgagcaggagaccctgctgctgctggaggggctggagctgcaccgg
gacgactggaaccgcgtcgcggcacacgtgggctcgcgcacgcacgacgagtgcatccta
cacttcctgaggctgcccatcgaggacccctatctggaggacagcggcgtgttgggcccg
ctcgcctaccagccgattcccttcagcaaggctggcaaccccgtcatgagcaccgtggca
ttcctcgcgtctgtggtcgacccgcgcatcgcgaccaaggccacgagagctgctatggat
gagttcgctgctatcaaagacgaggtccccgcggccatgatggaggcgcacgtgaaagcg
gccggctcgctgggcccgagcgccgcgctggcgagcacgggcatcgcgggcacgacgccc
gacccgccggagaagaaagacagcggcgatgtgaaggccgagccgatggaggtagagggc
gagggagaggccaaggtgaaggaggaaccagccgagccaaccacagagaaggacgctaaa
gaagacgacggaccacagcagcaagaacagccaactgttgtggacgcgaagcttcagtcg
gccgcggctgctgcgctggcggcggcggctgtgaaggccaagcacctggcgggcgtggag
gagcggaagatcaagtctctggtcgcgctgctggtcgagacgcagatgaagaagttggag
atcaagctcaggcacttcgaggagctcgaggctactatggaaagggagagagagggactg
gagtaccagcggcagcagctgatccaggagagacagcagttccatctagagcaactgaaa
gctgcggaatttcgcgcaaggaatcaagcgttacaaaggttacaagcagagaccggtggc
gcggtgaatttaggatccggagctaacgcggtggcggtgagtggggcgcccgccggaggc
accgcctccgagcccacgcaggacgccacggctccacaccaccacccctag
DBGET
integrated database retrieval system
