Leptidea sinapis (Wood White): 126971199
Help
Entry
126971199 CDS
T09272
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126971199
03041 Spliceosome [BR:
lsin03041
]
126971199
03036 Chromosome and associated proteins [BR:
lsin03036
]
126971199
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126971199
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126971199
mRNA cycle factors
Common to processing body (P body) and stress granule
126971199
Spliceosome [BR:
lsin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126971199
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126971199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SBF_like
Motif
Other DBs
NCBI-GeneID:
126971199
NCBI-ProteinID:
XP_050673324
LinkDB
All DBs
Position
23:9469768..9496978
Genome browser
AA seq
711 aa
AA seq
DB search
MSNVTNQNGTGLEQQLAGLDLQPQATKSAGRYIPPHLRRQLEAKSTEGEGSKRESLDSSE
GRDSHSSFGGNSRTFDRGGRRDDRDRDFDRGYDQRFPRRDRGSDSSRQNGDTDRWESDRW
GDRGRGGTARESRESRDIRRDDDYQEPPAPRNDRWKEPEPRAEERSNSRWPSDDVRRTSS
RRDENDWTVPLPRDERQELELFGTGNTGINFSKYEDIPVEASGENVPDFITSFEDVNLTE
IMRTNISSARYDKPTPVQKYAIPIVLGRRDVMACAQTGSGKTAAFLVPILNQMYEAGPVK
MGSYNRRKQYPLALVLAPTRELATQIYDEARKFAYRSRVRPCVVYGGSPILDQLRELERG
CHLLVATPGRLGDMLSRGRVALDHCRHLVLDEADRMLDMGFEPQIRKIVDCHSMPKTGER
QTLMFSATFPKQIQVLAQDFLYNYVFLAVGRVGSTSENITQKVVWVEEQDKRSFLLDLLN
ASNLLQRAPSEDDQLTLVFVETKKGADQLEDFLAGDGYPVTSIHGDRTQREREDALRRFR
TGKTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDS
NRGLARDLVELLVEAKQDVPNWLTSTAADGRSGGGGRRTGGSRSGGNRFGSSGSGFGARD
FRTQSRQPRSAGPSAMGNGFGYGGGGGGGSYGGSYGGSYGGNSGGPDWWDS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgttaccaaccaaaatggaacaggtctagagcagcagcttgctggtctggac
ttgcagcctcaggctactaaaagtgctggtcgttacattcctccacacttacgtaggcag
ttggaggctaaatcaacagaaggagaggggtctaagcgcgaaagcttagacagcagtgag
ggccgcgacagccattcatcattcggtggtaactctagaacgttcgaccgtggtggtcgg
cgcgacgaccgcgaccgtgacttcgaccgcggctacgatcagcggttcccgcgcagagac
cgcggtagcgactccagtcgtcagaatggcgacacagaccgctgggagtccgatcggtgg
ggcgaccgcggtagaggcggcactgcgcgggaatctcgcgagtcgagggacatccgccgc
gacgatgactatcaggagccaccagcaccacgcaacgaccgctggaaggagccggagccg
agggcagaggaacgatccaattctcgctggccttccgacgacgtgcgccgtacctcgtca
cgtagggatgaaaatgactggacagtcccgttacctcgcgacgagcggcaggagttggag
ctgtttggcactggcaacacaggcatcaacttttccaaatacgaggatataccggttgag
gccagcggagagaacgtcccggacttcattacaagttttgaggatgttaacctgacagaa
ataatgcgtacgaacataagctccgcgcgctacgacaagcccactccggtgcagaaatac
gcgatccccatcgtgctcggacgccgggacgtgatggcgtgcgcgcagaccggctccggg
aagacggccgctttcctcgtgcccatcctcaaccagatgtacgaggccggacccgtcaag
atgggctcgtacaaccgccgcaagcagtaccccctggctctggtgctggcgcccacacgc
gaactggccacgcagatctatgacgaggccaggaagtttgcgtatcgctcccgtgttaga
ccctgtgtagtatacggcggttccccgatcctcgatcagctacgcgagttggagcgcgga
tgtcacctcctggtggcgacgccgggccgtctcggtgacatgctctcccgtggtcgtgtg
gctctcgaccattgcagacatttagtcctcgacgaggccgaccgcatgttggacatgggc
ttcgagccgcagatacgcaagattgtggactgccactccatgccgaagactggcgaacga
cagacgctcatgttctcggccaccttccccaagcagatacaagtgctggcgcaggacttt
ctttacaattacgtgttcctcgctgtcggacgcgtgggttcaacatctgagaatattact
cagaaggtcgtgtgggttgaagaacaagataagcggtcctttttactagatttactgaat
gcttccaacttgctgcaacgagcaccctccgaggatgaccagctcacattagtctttgtt
gagactaagaaaggtgcggaccagctggaagatttcctggctggtgacgggtacccagtg
acatcgatccacggcgaccgcacgcagcgcgagcgagaagacgcactacgtcgcttccgc
accggaaaaacgcccatactcgtcgcaacagctgtcgcggctagaggtctggacataccg
cacgtgcgccacgtgatcaacttcgacctgccgtcggacgtggaggagtacgtgcaccgc
atcggacgtaccggccgcatggggaacctgggcgtcgccacctccttcttcaacgactcc
aaccgcgggctggcgcgcgacctggtagaactgctcgtcgaggctaagcaggatgtgccc
aactggttgacgagcacggcggcggacggacgctcaggcggcggcgggcggcgtaccggt
ggcagtcgatccggtggaaaccggttcggcagtagcggaagcggcttcggtgcgcgggac
ttccgtacacagtcacgacaaccgcgctcggccggaccctccgctatgggcaatggtttc
ggatacggcggcggcggtggcggcggctcgtacggcggctcttatgggggctcctacggc
gggaactccgggggacccgactggtgggactcgtaa
DBGET
integrated database retrieval system
