Leptidea sinapis (Wood White): 126971327
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Entry
126971327 CDS
T09272
Name
(RefSeq) CLIP-associating protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126971327
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsin04812
]
126971327
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
126971327
Cytoskeleton proteins [BR:
lsin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
126971327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
Cnd1
HEAT
HEAT_2
TOR1L1_N
PDS5
TAN
HEAT_Maestro
KinB_sensor
Motif
Other DBs
NCBI-GeneID:
126971327
NCBI-ProteinID:
XP_050673520
LinkDB
All DBs
Position
23:complement(3972645..4065270)
Genome browser
AA seq
1473 aa
AA seq
DB search
MAHYPQPSTLEDALPLLDRPDLRLRQQLGERLVALVRREEITQDIAAQLIDSLVAWLNGG
NFKVAQNALEVLTALAEQMGPEFSYYVPNVLPHIIDRLADTKEGVRIAARTCLSALGECK
AVPPRVLLARLSPALQHKGAHTREEALKCIAALLHTHGATELQLRGSMPNIAALLADPNS
AVRDAAQQVLLDVYRHVGERLRSDLRKKELIPAQKMALLEQKFDEAREAGLLLPSALAGT
DEADFVSRAVKRTMTIPTSARSRDGDSGASTPACEVRRGAALYLQPSASRKPPPPTKLNS
ASSVSSSGGGGGAEAGAVGEGAFEAAFAAAAPAPVYGARGLDDVYRHAAAMLGDKSADWE
KRVDALKKLRSLLNANVHTQYPAEFTAHLKDLSVPFLVVIKDLRSQVVREACITIAHMAK
VLGNKLEQFSLYILQELINLIQNSAKVVSSAATVCVRYLVVYVHSPRLIPVLHTNLTTNK
SKEIRSTLSEVLVLVLEKWSSASLEKQIPLIADAIRRACGDADSNARTCGRRAYACFKRH
FPAEAEALFNRLEPAAQKQIDRERLGSVDSALDRRMVTSPRSPSASVSASTENLSVANRS
NSLRRRRASQERPPLSQIPVAMRDRSGGVAARSVSAVDASAAQRARARAMYSQIARNKVA
AGTASLPRAKRSPVAGGGVPVSPEKTAGRSRARPGVSQSQPTSRSSSPSSRSGPVSLTNT
RRRPSGIPRSLAGSRETSPTRSSRSHSVVGGVRRRDSVEKTTRPPVASLRLLQQSREAEL
RSPEESSGYENRRDDDSEASSVCSERSFDSYRRHDSLTWSGRLGWESSPPPPPPPDEIIA
LCACSHWTERKDGLSHLARYLNSGRLLTEEQLKRLTELINKMLMDAHTKVYSLLLDAISE
LLLVHWQHLKDWLYQLMFRLLMKLGTDILGSVQSKIMKTLDVIHECFPAELQLHNIFRFL
ADGATGPTPKTKAAALRFLADLAHDYCTPSGLAVALQESGNTVPLRAISKVSSFANEPRS
GDVRVNARRALACLYDCNPVAFTGIMNELPVETQNIVNGVVQQHVRRTSSTGSDSPLRSN
AAPSGISTAEDVYSRIRKTTSEIHTYTAQHSNAECGNHTSSKDSGISQMSDVTLSNKGAN
GVPNGHYNSEVLGRAASADSSEDANSTKESSPTPHHRADYLHPHSEYASGRDKLKPYDTD
ENGLIITRCGLRETEVLKELSALDVNTAAPDKFERLLLATHEILKYGDGTRPVDYFKIIV
RVAVAALSMDDSSADKENSDNASAIHNSQSTGWGSVQERAATEAVRVLVWLCRREETRPL
WRDYFDLILLKLINAYGSPGKELVRAIDAGMPHIARAMPAAQVLALLKPMIRTRGYPTAL
CALKLATEVARARPGDLTDDMVGQLTEGVAQLSDHQNSNVRKAAVFCLVAFTFALGEERM
QPHLKHLSVSKARLLQVYISKQRDEANKGGGGS
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggcgcactacccccaaccgtcgaccctggaggatgcgctgccactcctggaccgtccc
gacctgcggctccggcagcaactgggggagaggctcgtggcgctggtgcgtcgtgaggag
atcacccaggacattgcggcgcagctcattgattccctggtggcttggctcaacggaggg
aactttaaggtggcgcagaatgctctggaagtactgacagcgctggcggagcagatggga
ccggagttctcctactacgtgccgaacgttctaccgcatattattgacagattagcggac
actaaggagggggttcgcatagcggcgagaacttgtctctcggcgctcggcgagtgcaag
gcggttccgccgcgcgttctgctcgcgcgtctttcacctgctctacagcataagggcgct
catacacgcgaagaagcgcttaaatgtatagccgcactattgcacacgcacggcgcgact
gaacttcaactgcgcgggtccatgccgaacatagctgccctcctcgcagatcccaactcg
gcagtgagggacgctgcccagcaggtgctattggatgtgtacagacacgttggtgaaagg
ttgaggtcagatctgcgcaagaaggagctgataccggcgcagaagatggcgctgctggaa
caaaaatttgatgaagcaagagaagctggcctactgttgccttcagcactggcgggcaca
gacgaggcagatttcgtgagtcgagccgtgaagcgaaccatgacgataccgacgtcggct
cgcagtcgcgatggagacagcggcgcatctacgcccgcatgtgaggtgcgacgaggggcc
gcactgtacttgcaaccgtccgccagcaggaagccgccgccacccacaaagctcaacagc
gcctccagcgtgagcagtagcggcggcggaggcggagcggaagcgggggcagtgggtgag
ggggcttttgaggctgcattcgcggccgctgcgcccgcgcctgtgtacggcgcgcgcggg
ctggatgacgtgtaccggcacgccgccgccatgttgggagacaagagcgccgactgggag
aagcgggtcgacgcgctgaaaaaactgcggtctctcctcaacgctaacgtgcacacgcag
taccctgcggagttcacggcgcacctcaaggacctctccgtacccttcctcgtcgtcatc
aaggatttaaggagccaggtggttcgcgaggcgtgcatcaccatagctcacatggcgaag
gtgctcgggaacaaactggagcagttcagtttgtacatactgcaggagttgatcaatctc
atacaaaactccgccaaggtggtgtcgagtgcggccacggtatgcgtgcgctacctggtc
gtgtacgtgcactcgccgcgactgatccccgttctacacaccaacctgaccaccaacaag
tccaaggaaatccgctccacgctcagtgaagttctagtcctggttctggagaagtggtcg
agcgctagtctcgagaagcaaattcccttaatagcggacgcgattcgtcgcgcgtgcggc
gacgcggatagtaacgcacgtacgtgcggcaggcgtgcatacgcgtgcttcaagagacac
ttccctgcggaggcggaggccctgttcaaccggctggagcccgcggcgcagaaacagatt
gaccgcgagcgacttggcagtgtggacagcgcgctcgacagaagaatggtgaccagcccg
aggagtccatctgcaagtgtctcagcgtctactgagaacttgtcggttgccaatcggagc
aattctctgcggaggagacgtgcctcccaggagcgtcccccgctgtcacagataccggtc
gctatgagagatcgcagcgggggcgtggcggccaggtcagtgtcggcggtggatgcgagc
gctgcgcagcgggcccgtgcgcgcgcgatgtactcgcagatcgcgcggaacaaggtggcc
gcaggcacggcgagcttacctcgcgccaagcgctccccagtcgccggtggaggggtgccg
gtcagcccggagaagactgccggaagatccagggctagacctggagtgtcacagtcacaa
ccgacatctcgctcgtcttctccgtcgtctcgcagcgggcccgtgtcgctgaccaacacc
aggcggcgaccttccggtatacccaggtctttggctggctccagagaaaccagccctacc
aggagcagtcggtctcacagtgtggtgggtggagtgaggcgccgcgactcggtggagaag
accaccagacctcccgtggccagcttacggctgctgcagcagagcagggaggctgagctg
aggagtccagaggaaagttccggttacgagaaccggcgtgatgacgactcggaggcgtcg
agcgtgtgctccgaacgaagcttcgactcctaccggagacatgatagcctgacgtggtcg
ggtcggttgggctgggagtcatctccgccgcccccgccgccgccagacgagatcatcgcc
ctgtgtgcgtgcagccactggaccgagcggaaggacggcctgtcacacttggcccgttac
ctgaacagcggtcgactgctcacggaggagcagctcaagcggctcacggagctgatcaac
aagatgctgatggacgcgcacaccaaggtgtactcgctgctgctggacgcgatcagcgag
ctgctgctggtgcactggcagcacttgaaagactggctctaccagctcatgttccggctg
ctcatgaagctgggcactgacatcctgggctcggtgcagagcaagatcatgaaaaccttg
gatgtcatccacgagtgcttccccgctgagctgcagctccataatatattcaggttccta
gcggatggcgcgacgggtcccacaccaaagacgaaggcggccgctctccggttcctggcg
gatctagctcatgactactgcacccccagcggcttggctgtcgctctacaagagagcggc
aacacggtcccactgcgcgccatcagcaaggtgtcgtcgttcgcgaacgaaccccgcagc
ggagacgtgcgggtgaatgctcgccgagcgctcgcctgtctgtacgactgcaatcctgtg
gccttcaccggaattatgaatgaactcccggtggaaactcagaacattgtaaacggggtc
gtgcagcaacatgtcaggagaacttccagcacaggcagcgatagtccactgcggtccaac
gctgcgccgagcggcatcagcaccgcggaggacgtgtactccaggatccgcaagaccacc
tccgagatacacacctacacggcgcaacattccaacgcggagtgcggaaaccacacgtcg
agcaaggactctggcatcagccagatgtcagacgtgacgctgtccaacaagggcgctaac
ggagtgcccaacggtcactacaacagtgaggtgttgggtcgcgctgcatctgctgactct
tccgaagacgccaatagcaccaaggaatcatcgccgacccctcatcacagagccgactat
ctccaccctcatagtgagtacgcgtctggtcgggataagctgaagccctacgatacggac
gagaatggtctcatcatcaccagatgcggcctccgcgaaacggaggtcctgaaggagctg
agcgctctggacgttaatactgcggccccggacaagttcgagcgactcctgctggccacg
cacgagatactcaagtacggggacggcactcgacccgtcgactacttcaagattatcgtt
cgcgtggccgttgctgcgctctccatggacgatagttcagccgacaaggaaaacagcgat
aatgcctccgccatacacaactcacagtcaaccgggtggggcagcgtgcaagagcgggca
gcgacggaagccgtgcgcgtgctggtgtggctgtgccggcgcgaggagacgcggccgctg
tggcgcgactacttcgacctgatcctgctgaagctgatcaacgcgtacggcagcccgggc
aaggagctggtgcgagccatcgacgcgggcatgccgcacatcgcgcgagccatgcccgcc
gcgcaggtgctagcgctgttgaagcccatgatccgaactcgtggctaccccacggcattg
tgtgcgctcaaactggccacggaggtcgctcgcgcacggcccggagacctcaccgacgac
atggtcgggcaactcacggagggtgtcgcgcagctgtcggaccaccagaactccaacgtt
cgcaaggcggccgtattctgtctggtcgctttcacattcgcactgggtgaggaacggatg
cagcctcacctcaaacatctctccgtcagcaaggcgaggcttctacaggtgtacataagc
aagcaacgggacgaagcgaacaaaggtggaggaggctcgtag
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