Leptidea sinapis (Wood White): 126971332
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Entry
126971332 CDS
T09272
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126971332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsin03036
]
126971332
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126971332
REST complex
126971332
Heterochromatin formation proteins
Other heterochromatin formation proteins
126971332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
HHD_RTEL1
PAH_ZNF598
Bd3614-deam
Motif
Other DBs
NCBI-GeneID:
126971332
NCBI-ProteinID:
XP_050673531
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All DBs
Position
23:complement(2253401..2317282)
Genome browser
AA seq
1348 aa
AA seq
DB search
MMKRTGPRIGPDEPTPLSQSPAQIQQAGASNMHTLAQSAQPQILDMYAGATAMLSVGAGF
GRGPTRPGAPPVINYLKTNAVQYAPPKQQVPPRLKLVQPPICGRQSPSALAAPASFQRLK
VEDALSYLDQVKYRFNAQPQVYNDFLDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGF
NTFLPPGYKIEVQSNGQVSVSMPSPTGLGVGSVANVGNVGTVGNVQHATHGSGVLLGVHH
ATVQTQLVHLLPVPQSVSQVVHNLAVNPTPANTLHHISQAHQQIEAAAIHHTSGGPPNTG
ASHGSTTAGQPVEFNHAIEYVNKIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPHAKQQ
TEQEVYAQVAKLFENQEDLLAEFGQFLPDAKAVTKPPHVRTPPPARVEPEPDRYPTASVS
PPAAQHTIHHAQIPKHTSTSNVSAPPVPHHHLKRSPSFSSTTPLSAGAPPSKKARCAGAA
PVSAAMSAAMSAGASVVRDVSHAEAAKLATAHEYNFFDRARKALRSQHVYENFLRCLLLF
TNEIISSSELMCVVSPFLCRHPELTKWLQDFLGPVSPPSTPTTHHPGISNNTSTPVLGYE
RSRLVSDSKPLATASSVLRHDRPHTDTNMDIDLSTCKRLGTSYCALPREAANKRCSGRTP
LCKEVLNDTWVSIPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNASTILVLEG
VQKKLSRMSSEEAARYRLDDCLGGHSPTIHQRALRRIYGDKVAVDIIAGLKKNPVVAVPV
VLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQSDLKAMRSKSLFNDVE
SAYAARRPGPHYVADYNVHTRQEAIKIVRDAAELLIHHARRQTAIQKAEKRRIKQLLRHF
LPDLLAHPRQPLSDDERDEALIAAEDKDEARSPGSPTEQTDEKASVKQEKHESSESDNAS
DKSSRHNKVDKENKPKNNNNTESKESSNASIKRSSSNDDSVKSEVKTEMDIEDDYRDHPP
NEARFVCTSSWYLFLRLHGVLCARLAGARRAALAQARSEAGAERPPSVARALRLRPHNLP
SEASSPAEYYTALLELVKGVLDGNMEAAAYEDAAREMFGIKAYPAYTLDKIVSTAVRQLQ
HCVSERWSVRAAELCARGGMRGPLSYVRRAAAFLQRSHTTFLVRVYGGNECKVTFELLEP
ASEGRTSPQLNDNSRLSPTNQCGRENGTMVHAAAAWSLYTERYARPDAGGRARRPVYLRR
NARRNGGGADAVAAPHARDPPPAARRRKPPRVTDLAECTLAHTIRLVACRPHQLYRAGCL
RAARESQPRVSSTRRERFQAWLATRVST
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgcacaggacccagaatcgggcctgatgagcccactcctctttcacagagt
cctgctcagatacagcaggcaggtgcaagcaacatgcataccttggctcagtcagcacaa
ccgcagatcttagatatgtacgcaggcgcgacagccatgctttcggtgggcgcgggcttc
ggccgcggccccactcgccccggagctccgcccgtcatcaactatctgaagacgaacgcc
gtgcagtatgcgccgccgaagcagcaagtaccacccaggctcaagttggtgcagcccccc
atatgtgggcggcagtctccaagcgctctggccgctcccgcttccttccagcggctcaag
gtggaagatgccttgtcatacctcgaccaggtcaagtacaggttcaacgcgcagccccag
gtctacaacgactttctggacatcatgaaggagttcaagagccaaacgattgatacgccc
ggagtcatcactcgagtttcaaacctgttcaagggccatccggagttgatagttgggttc
aacactttcctaccaccagggtataagatcgaagtacagagcaatggacaggtgtctgtc
tcgatgccgtcgcccactggcctgggcgtgggcagcgtggccaatgtgggcaacgtgggc
accgtgggcaatgttcagcacgccacgcacggtagcggggtcctactgggcgtacaccac
gctacagtccaaacacagttggtgcatttattgcccgtgccacaatcggtcagtcaagtg
gttcacaacctggcggtgaaccccacgccagctaacaccctgcaccacatatcgcaggca
caccagcagattgaagcggctgccatacatcacacaagtggtggaccacccaacacgggc
gcttcgcacggctctacgacggcgggtcaaccggtcgaattcaaccacgccatcgagtac
gtcaacaagatcaagtcccggttctcccgccagccggacaagtacaagcggttcctggag
atactgcacgcgtaccagcgcggccaccgggacctcaaggagccgcacgccaagcaacag
accgagcaggaggtgtacgcacaggtggcgaaactgttcgagaatcaggaggacttgttg
gccgagttcggtcagtttctaccggacgccaaggcggtgacgaagccgccacacgtacgc
acgcctccaccggcccgtgtagaaccggaaccggatcggtaccccactgcgtcggtgtcg
ccgcctgcagctcagcacacgatacaccacgcacaaattccaaaacacacaagcactagc
aatgtgagcgcgccgccggttccacaccaccacctgaagagatcacctagcttctcctcc
accacaccactgtccgcgggcgcgccacccagtaagaaggcgcggtgtgcgggcgcggcg
ccagtgtcggcggccatgtcggcggccatgtcagcgggcgcgagtgtggtgcgggacgtg
tcgcacgccgaggcggccaagctggcaaccgcgcacgagtacaacttcttcgaccgcgcg
agaaaagcgctccgctcgcagcacgtctacgagaacttcctcagatgcctgctgctgttc
acaaacgagataatatcgtcgtcggagctgatgtgtgtggtgtccccgttcctgtgccgg
caccctgagctcaccaagtggctgcaggatttcctggggcctgtgtcgccaccgagcaca
cccacaacgcaccatcccggtatcagcaacaacacgtcgacaccggtgctggggtatgag
cgctcgcggctggtcagcgactcgaagccgctcgccactgccagttcagtgctcagacat
gacagaccacacacagacaccaatatggatatcgatctgtcgacgtgcaagcggcttggc
acctcgtactgcgctttgccacgcgaggcagctaacaaacggtgctcgggaagaactcca
ttgtgtaaagaggtgctgaatgatacctgggtgtcgataccgacgtggagcgaagactcg
acgtttgtgacatcacgcaagactcaatatgaggagtacatatacagatgcgaggacgag
aggttcgagttggacgtggtgattgaaacgaacgcgtccacaatcctggtgctggagggc
gtgcagaagaagctgtcgcgcatgagcagcgaggaggcggcgcggtaccggctggatgac
tgtctgggtggacactcgccgaccatccaccagcgcgcgctgcggcggatatacggtgat
aaggtggcggtggatataatagccggcttgaagaagaaccctgtggtggctgtgcctgtc
gtactcagaaggctgaaagctaaagaggaagaatggcgagaggcacaaaagggcttcaac
aagcagtggcgtgagcagaacgagaagtattacctgaagtcgctggaccaccagggcatc
aatttcaagcagagcgacttgaaggcgatgagatctaagtcgctgttcaacgacgtggag
agcgcgtacgccgcgcggcgcccgggcccgcactacgtggccgattataacgtgcacacc
cgccaggaagctatcaagatagtgcgcgacgccgccgagctgctgatccaccacgcgcgc
cggcagaccgccatacagaaggcggagaagcggcgcatcaagcagctcctgcggcacttc
ctgcccgacctgctggcgcacccgcggcagccgctctccgacgacgagcgcgacgaagct
ctgattgcagcagaagataaagatgaagctcggagccctggcagtcctacagaacagact
gatgagaaggcgtcggtcaaacaagagaaacatgagtcatcggaatctgacaacgcgtcg
gataagagcagccgtcacaacaaagtagacaaggagaacaaacccaagaacaataacaac
actgagagcaaagagagctcaaacgccagtatcaaacgcagcagcagcaatgacgacagt
gtcaagagtgaagtgaagactgagatggacattgaggacgactacagagatcatccacct
aatgaggcgcggttcgtgtgcacgtcgtcgtggtacctgttcctgcgcctgcacggcgtg
ctgtgtgcgcggctggcgggcgcgcggcgcgcggcgctggcgcaggcccgcagcgaggcc
ggcgccgagcggccgccgtccgtggcgcgcgcgctgaggctgcggccgcacaatctgccg
tcggaggcgtcgtcgcccgcggagtactacaccgcgctgctggagctggtgaagggcgtg
ctggacggcaacatggaggcggcggcctacgaggacgcggcgcgcgagatgttcggcatc
aaggcgtaccccgcctacacgctcgacaagatcgtgtccaccgccgtcagacagctgcag
cactgcgtgtccgagcgctggtcggtgcgcgcggccgagctgtgcgcccgcggcggcatg
cgcggcccgctgtcgtacgtgcggcgcgcggccgccttcctgcagcgctcgcacaccacc
ttcctggtccgagtgtatggcggtaacgagtgcaaagtgacgtttgagttgttagagccg
gcgagtgaaggacggacgtcgcctcagcttaatgacaactccagattgtcacctaccaat
cagtgcggccgcgagaacggcacgatggtgcacgcggcggcggcgtggtcgctgtacacg
gagcggtacgcgcgccccgacgccggcggccgcgcccggcgacccgtgtacctgcgccgc
aacgcgcgccgcaacggcggcggagctgacgccgtggccgcgccgcacgcgcgtgacccg
ccgcccgccgcgcgccgccgcaagccgccgcgcgtcaccgacctggccgagtgcacgctc
gcacacaccatcaggttggtggcgtgccgaccgcaccaactgtatcgcgcggggtgtctc
cgcgccgcgcgagagtctcaaccgcgcgtgtcatccacgcggcgggaacgcttccaagcc
tggctggccactcgcgtctcaacgtag
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