Leptidea sinapis (Wood White): 126971359
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Entry
126971359 CDS
T09272
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126971359
Membrane trafficking [BR:
lsin04131
]
Protein recycling
Others
EARP complex
126971359
Endosome - Golgi transport
Tethering complex
GARP complex
126971359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG5_N
Sec6
Vps54_N
Syndetin_C
COG4_N
NBD94
Motif
Other DBs
NCBI-GeneID:
126971359
NCBI-ProteinID:
XP_050673601
LinkDB
All DBs
Position
23:complement(5272671..5302571)
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AA seq
793 aa
AA seq
DB search
MDSNDVLDDKDSGPEVQLNFPASVMSRIEELMGGTEQFDSDEFDAVAYINRVFPTEQSLS
AVEAAAARCEFRLAAVQHDMRRLVRAQHDQRVTGHEALKEAQHCISELALQVADINKKAS
RSESMVREITSEIKQLDCAKWNLTSAITALNHLHMLAGGAATLRSLAQNRQYKELVLPLQ
AIMEVLQHLECYRDIRELNVLREDVRVIRSQLADQIVADFKQAFTGGAGKGGVSARTLGE
ACGVLDALEPRVKRDLLTWFVGLQLQEYEHLFSREQESAWLAHIERRYAWLKKHLLSFEE
TLGAVFPAHWRLSERIAYQFCKVTRDMLSEVLVSRRGEVDVKLLLYAIQKTSNFEMLLHK
RFVGTETPAETSDTHETEVGCSDNRDEFPEEAESVRWSGAVGRCFEPHLSIYIDSLSDKL
AAMLQTFTQEARSLEVGAGGEGVASGGGGVLSSCAELFVVYKKCLAQCAALSTAEPMLEL
AGVFQQYLRQYAGGVLQGALPRAPPPAPLSHVPALVTNLHTFLRDDSAAPRFTKQEIAKI
TSVITTSEYCLETTIHLEQKLKEKIVSRLASKIDLSHEQDLFHKMISTCIQLLVQDLEVS
CEPALQAMTKISWLHYDIVGDQSSYVTQIIMHLKNTVPNLRDNLASSRKYFTQFCIRFAN
SFIPKFIQNIYKCKPISTVGSEQLLLDTHMLKTALLELPSIGSEVKRQGPSTYTKVVIKL
MTKAEMILKLVMAPIDNNLEGFVAQFVQLLPESGLVELHKVLDMKGTKLSKAQLSSMDAK
FKDLSRSNSEVVK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaacgacgtattagatgataaagatagtggtcctgaagttcagttaaatttt
cctgcttctgttatgagtcgaattgaagagttgatgggaggaacagaacaatttgatagt
gatgaattcgatgcagtggcatacatcaaccgggtgttcccaacggagcagtctctgtcg
gcggtggaggcggcagcagcgcgttgtgagttccgcctggccgccgtacagcatgacatg
cggcggctggtgcgcgctcagcacgaccagcgagtgactggacatgaggcgctcaaggag
gcacagcactgtatatcagagctggccttacaggtggcggacataaacaagaaggcgtcc
cgcagcgagagcatggtgcgggagatcacgtcggagataaagcagctggactgtgccaag
tggaacctgacgtccgctatcaccgcgctcaaccacctacacatgctggcgggaggagcg
gccacgctgcgctcgctggcgcagaacagacagtacaaggaactggtgctgcctctgcag
gcaatcatggaggtgctgcaacacctggagtgctaccgcgacatccgcgagctcaatgtg
ctgcgggaggacgttcgagtcatccgctcacagctggccgaccagatcgttgccgacttc
aagcaggccttcaccggcggggctggaaagggtggcgtgtcggcccgcacactgggcgag
gcgtgtggcgtgttggacgcactagagccgcgtgtcaagcgggacctgctcacgtggttc
gtagggctgcagctgcaggagtatgagcatctgttctcccgcgagcaagagtccgcgtgg
ttggcacacatcgagcgccgctacgcgtggctcaagaagcacctgctgtcgttcgaggag
acgcttggggccgtgttcccggcgcactggaggcttagcgagaggatcgcgtaccagttc
tgcaaggtgacgcgcgacatgctgagcgaggtgttggtgtcgcggcggggcgaggtggac
gtgaaactgctgctgtacgcgatacagaagacgagcaacttcgagatgttgctgcacaag
agatttgtcggtaccgagactccggcggagacatcggacacccacgagacagaagttggt
tgtagcgacaacagagacgagttcccagaggaggcggagtccgtgcggtggtcgggtgca
gtgggccgttgcttcgagccgcacctctccatctacatcgactcgctgtccgacaagctg
gccgccatgctgcaaaccttcacacaggaggcgcgctcgctcgaggtgggcgccggcggc
gagggcgtggccagcggcggcggcggcgtgctgtcgagctgcgccgagctgttcgtggtg
tacaagaagtgtctcgcgcagtgcgccgcgctctccacggccgagcccatgcttgagctg
gcgggcgtgtttcaacagtacctgcggcagtacgcgggcggcgtgctgcagggggcgctg
ccccgggctccgccccccgcgcccctcagccacgtgcctgcgctcgtcaccaacctgcac
accttcctgcgggatgacagcgccgcgcccagattcacaaaacaggagatagcgaagatt
acaagcgtcatcacaacgtcggagtactgtctggagaccactattcacctcgaacagaag
ctcaaggagaagatcgtgtcaagactcgcttccaaaatagatctctcgcacgaacaggat
ctcttccacaagatgatatctacgtgcatccagctcctggtgcaggacctggaggtgtcg
tgcgaaccggcgcttcaggccatgaccaagatatcatggctccactacgacatcgtcgga
gaccagagctcctacgtcacacagatcattatgcatctgaaaaatacagttccaaatctc
cgagacaatttagcatcatctcgtaaatacttcacgcagttctgcattcggttcgctaat
tccttcatcccgaagttcatccagaacatttacaagtgcaagcctatatccacggtgggc
tcagagcagctgctgctggacactcacatgctgaagaccgccctgctggagctgccctcg
atcgggtcggaggtcaagcgacaggggccgtccacctacacgaaggtcgtgatcaaactg
atgacaaaagccgagatgatactcaagctggtgatggctcccatcgacaacaacctcgaa
ggtttcgtggcgcagttcgtacagctgctaccggagagtgggctggtcgaactccacaag
gttctggacatgaagggcacaaagctctccaaagcgcagctcagctcgatggacgccaag
ttcaaagatctgtctagatctaacagcgaggttgttaaatga
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