Leptidea sinapis (Wood White): 126971574
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Entry
126971574 CDS
T09272
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126971574
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126971574
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
126971574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
126971574
NCBI-ProteinID:
XP_050673846
LinkDB
All DBs
Position
2:9866804..9931047
Genome browser
AA seq
2172 aa
AA seq
DB search
MIELPRITRALRAHTELDKPRCLKPTDTNAVVNLPKKERYKSYIDIYNYLKQNNQDSLLS
NLSELKEACKLLAGGESDDLAEDAAVMTLRMFMDHDIVMLKHLSQLRQTFGNVQSSTVNT
ICQIVMSISNELSDKDKEYIKKETSEETVELKLWGDHIQCNNIPYKPIKKPLPKLTKKRA
TDSVFVNEFSMKYDSTMDKRNVVKVPKPLQEPKFGKVWLENKVRELYENSSQMSSADVLQ
SIITFLNSPRSNDEMQNDLFELLGFDQFEFIQEVLQHRRDITDSLRAPIQEPTIEEMAAL
LPENKMPQYLCQVSVRSEQEKLLANLIRKKEKKMKNKKTDNEEDEPEINVAQLRARRLAE
LTKPVVPFSSSKSNVDPILQKISYFQTKVQYPNVYDSSINAKNSAGFVSGMKLMLPENAI
RKDTKEYEEVIIPKTEQSALEVGNVRVPISALDAIGQMAFENIQQLNRIQSVVFNTAYNT
NENLLICAPTGAGKTNIALLTVVHEIKQHIENDVIMKNKFKIIYIAPMKALASEMTASFG
KRLQSLGVSVRELTGDMKLTKTEVQQTQMIVTTPEKWDVVTRKGATDTELASIVKLLIID
EVHLLHGDRGPIVEAIVARTLRQVESTQNMIRIVGLSATLPNYVDVARFLRVNPNIGLFY
FDSRFRPVPLEQQFIGVKDVGGGGMAYLRQMQQMNEICYDKASDMVQKGHQVMVFVHARN
ATHQTAMVLKELAQKKGHLKYFEPEDSAGFLKAKKSIASSPNKQLSELFASGFACHHAGM
LRSDRNMVEKYFGEGYIKVLVCTSTLAWGVNLPAHAVIIRGTEIYDQSHGTFVDLSILDV
LQIFGRAGRPQFDSSGTGVIITTHDKLSHYLKTMTNQFPIESNFINLLADNLNAEVALGT
VTNIDEAVEWLSYTYLFVRMRINPQVYGLTYSDVQEDPMLEGKRRELITSAAMTLDKTQM
LRYNERTGDLNVTDLGRTASHYYITCETMEVFNSMVRKSMTQGYVLEMLTRCSDFQQLKI
RKEEITELWNLKDQYCELHIEDPPEDIHWKINILLQTYLSRGRVNASSLQSDLNYISQNA
VRIVRALFEITLRKNNAYMAGLYLKMAKMMELQLWDFYSDMRQFNCFPNDILKHLEYPML
KPDQIRDMDWREVGDLVRNPKAAHHVKKCADEFPLLDMEASLHPITRTVLRIRLTIVPNF
KWNDKFHGKAPEAFWIWVEDPESDIMYYHEYFLITKKQVITREPQELVITIPICEPLPPQ
YYIRATSERWLGSESVLPLTFQHLILPETHPPHTDLLELQPLPVTALNKTSFEMLYNFTH
FNPIQTQIFHCLYHTDHNVLLGAPTGSGKTIVAEVAMFRVFNTYPKCKVVYIAPLKALVK
ERIKDWKVRLEERLGMSVVELTGDVSPDIRAIKRAKVIVTTPEKWDGISRSWQTRNYVQD
VALIVIDEIHLLGEDRGPVLEVIVSRTNFIGSHTSRRLRIIGLSTALANAKDLANWLNIG
EIGLYNFRPSVRPVPLEVHISGHPGRHYCPRMMSMNKPTFQAIRTHSPAAPALVFVSSRR
QTRLTALDLIAYLAAEENPKQWLHMKESEMEQILSNIRESNLKLTLAFGIGIHHAGLHEK
DRTTVEELFINQKIQVLICTATLAWGVNFPAHLVVIKGTEYFDGKQKRYVDMPITDVLQM
MGRAGRPQYDNEGVAVVLVHDQKKNFYKKFLYEPFPVESSLLQVLADHLNAEIVAGTVRS
KQDILDYLTWTYFFRRLMRNPSYYNLESLEPQDVNYYLSNLVQTSVEALFDAGCVEIQED
ERTIETTWKGRIASYYYLSHKTMTHFTRNLHRDLDIDALLRVLSDCEEYATLPVRHNEDV
LNGELSQSCRLPVDSLSLDSSHVKTFLLLQAHLTRLPLPNTDYLTDTKSVLDQTVRIIQA
MIDTSAEHGWLSVCLSCQMLMQSIVQARWPADSPLTTLPHIEPQHLYMFTQMTRDTNKPC
TVLNGLKVSMRSYEGLARYLRREFDENQIEQIYKAINDLPTLDIKLFVRGLWFDSDGEQQ
KPVRQPMTRDQWIPLHADQEYTLVLEMHRRGGNPNSVMCPRFPRAKNEGYFVTLGTVEYG
ELHALKRTPPRGTAQITFYTPSNTGRIIYTIYIMSDSYLGLDQQYDLHFEIIDAIPPETV
ERAYEPDKLLLE
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcctcgtataacacgagctctaagagcacacacagaacttgataaacct
cgatgtctgaagccgacagatacaaatgcagtcgtcaatttgccaaaaaaagaaaggtac
aagtcttacatagatatttacaactatttaaaacaaaataaccaagattcattgttatca
aatctgagtgaactaaaggaggcatgtaaactactagcagggggtgaaagtgatgattta
gctgaagatgctgctgttatgaccctgagaatgtttatggatcatgacatagtgatgctt
aaacatctctctcaacttcgacagactttcggaaatgttcaatcgtctactgtcaacaca
atctgtcagatagttatgtcaatatcaaatgaattaagtgataaagataaagaatatatt
aaaaaagaaacaagtgaagaaacagtcgaattaaaactgtggggtgatcatatacaatgt
aacaatataccatataaacctatcaagaagcctcttccaaagttgaccaagaaacgggca
acagatagtgtctttgttaatgaattttcaatgaagtatgatagtactatggataagaga
aatgtagtaaaggtccctaaacctctacaggaacctaagtttggaaaggtgtggttagag
aacaaagtaagagaactctatgaaaactcatcacagatgtccagcgctgatgttttacaa
tcgataataacattcctaaattctcctcggtctaatgatgaaatgcagaatgatctgttt
gagttactaggctttgatcaatttgaatttatacaagaagttcttcaacaccgtcgggac
ataactgatagtctaagagcacctatacaagagccaactattgaggaaatggctgcactc
cttcccgaaaacaaaatgcctcagtacctatgtcaagtgtcagttcgttcggaacaggag
aagttgctggcaaatctaatcagaaagaaagagaaaaagatgaagaacaagaagacagat
aatgaagaagatgagccggaaattaatgttgcccagctacgtgctaggagattggcagag
ctcacaaaaccggtggtgccgttttcttcatcaaagagcaacgtagatccgatattacag
aaaatatcgtatttccaaacaaaagtgcaataccccaacgtgtatgattcgtctataaac
gctaagaattcagcaggtttcgtatctggcatgaagctaatgcttcctgagaacgcaata
cggaaagacacaaaagagtatgaagaagttattatacctaaaacggaacaatctgctttg
gaagttggcaacgttcgtgttccaatatctgctttggatgcgatcggacaaatggctttt
gagaacatacagcaattgaaccgtatacaatctgtcgtgttcaacacggcgtacaacact
aatgagaatttgctgatctgcgctcccacgggcgcggggaagacaaacattgcgctgttg
actgtcgtacatgagatcaagcagcatattgagaacgatgtcatcatgaagaataagttt
aagataatctacatagcgcctatgaaagcgctcgcgtcagaaatgacggccagttttggc
aagcggctgcagtcactcggggtctcggtacgggagctgacaggagatatgaagctcacc
aagacggaggtgcagcaaacgcagatgatagtcaccacaccggagaagtgggatgtcgtt
accaggaaaggagccacggacacagagctagcgtctattgtcaaactgctgatcatcgac
gaggttcacttgttgcacggtgatcggggtccgatagtagaggcaatcgtagcgaggacc
ctgcggcaagtggagtccacacagaacatgattcggatcgttggactttcggcaacactg
ccgaactatgtcgacgttgctagattccttcgagtgaatccaaacatcggtctattctac
ttcgactctcgcttccgaccggtgccacttgagcagcagttcattggagtcaaggatgtc
ggtggtggagggatggcatacttacgacagatgcaacaaatgaacgagatctgctacgat
aaagcgtcagacatggtgcagaaaggtcaccaggtgatggtgtttgtacacgcacggaac
gctacccaccagaccgccatggtattgaaagagttggcacagaagaagggacacctcaaa
tactttgaaccggaggattctgctggtttcctgaaggctaagaaatccatcgcaagcagt
cccaacaaacaactaagcgagctgtttgcgtctggattcgcctgccatcacgccggcatg
ctaaggagcgatcggaatatggttgaaaaatacttcggggaaggctacataaaggtgttg
gtatgtacatcgaccctagcatggggagtcaacttgcccgcacacgccgttattattaga
ggcacagaaatctacgaccagagtcatggtacgttcgtcgatctcagtatactggatgtg
ctacaaatattcggcagagctggtcgaccgcagttcgactcgtccggcacgggagtcatt
attacaacgcacgacaaactgtcgcactatctcaagactatgaccaaccaattcccaatt
gagagcaacttcatcaatctgcttgcggataatttgaatgctgaggtggcgctgggcaca
gttacaaatatcgacgaggcagtggaatggctgagttacacctatctcttcgttcggatg
aggatcaatccacaggtgtatggactaacgtacagtgacgtccaagaagaccccatgttg
gaagggaaacgacgagagttgataacgagcgccgccatgacacttgataagacgcaaatg
ttgcggtacaacgagcgtactggcgacctcaacgttactgatttaggaagaacagcgagc
cactattacataacctgcgagacgatggaggtattcaactctatggtacgcaagtcaatg
actcaaggatacgtcttggaaatgcttacgagatgctctgattttcaacaactgaagatc
cggaaggaagaaataactgaattatggaatctaaaagaccaatactgtgagctgcatata
gaggacccgccggaggatatacactggaagataaatatcttgctgcagacttatctgtcg
agagggagggtcaacgcttcctcattacagtcagacttgaattatattagtcagaatgca
gttcgtatagtgcgtgccttattcgagataaccttgcgtaagaacaacgcatacatggcg
ggcctgtacctcaagatggcgaagatgatggaactgcagctgtgggacttctacagtgac
atgcgacagttcaactgtttccccaacgacatactgaagcacctagagtatcctatgcta
aagcctgaccagataagagacatggattggagggaagttggtgacttagtacgcaatccg
aaggcggcccaccacgtcaagaaatgtgcggatgaattccccttgctcgacatggaggca
tctctacaccccatcactaggactgtgcttcgaatacgactgactattgtacctaatttc
aaatggaatgacaagttccacgggaaggcacccgaagcgttctggatatgggtggaggac
cccgagagcgatattatgtactatcacgagtatttcctcattactaagaaacaagttata
acgcgggagccacaagagctggtgataacaatacccatatgtgaaccactaccaccacag
tactatatacgagcgacttccgaaagatggcttggatcggaaagtgtgttgccgcttaca
ttccaacatttaatactaccggagactcatccccctcacacagatctattagaactgcag
ccgctaccggtgacagccctaaataaaacgtcgttcgaaatgctatacaacttcactcat
ttcaacccgatacagacgcaaatattccattgtctctaccacaccgaccataatgtgctg
ttgggcgcacccaccggctctggcaagactattgtagctgaggttgccatgttcagggtt
ttcaatacatatccgaaatgcaaggtcgtctacattgcacctcttaaagctctggtcaaa
gagaggattaaagactggaaggtcagactagaagagcgtctgggtatgagcgtggttgaa
ctgacaggggacgtatctcccgacataagggcaatcaaacgtgcgaaagtgattgtgacg
accccggagaaatgggacggaatcagtcggtcttggcagacccggaactacgtccaggat
gtggcgttgatcgtcattgacgagatacatctgttaggggaggacaggggccccgtatta
gaagtcattgtgtctagaacgaacttcatcggatctcatacttcgcgacgattgcgaatt
atcggcttgtctactgcactcgcgaatgccaaggacttggcgaactggctaaacatcggg
gaaataggactttataactttagaccttcggtgcggccggtgcctttggaggtgcacata
tcgggacaccccgggagacactattgtcctcgcatgatgtccatgaacaagcccaccttc
caagcgatacgcacgcattcgccggcggcgcccgcactcgtcttcgtgtccagtaggaga
cagacaagactaacagcgctagacctcatagcttatttagcagcagaagaaaacccgaag
caatggctgcatatgaaagaatctgaaatggaacagatattgtcgaacattcgcgagtcg
aacctcaagttgacgctcgctttcggcatcgggatccaccacgccggtttgcacgagaaa
gatcgtacgactgtcgaagagctgtttataaatcagaaaatacaagtcttgatatgcaca
gctaccctggcgtggggagtgaacttccccgctcatttggtcgtcatcaaaggcaccgag
tacttcgatggaaaacagaagagatacgtcgacatgcccatcacagacgtgttgcagatg
atgggcagagctggtagaccacagtatgacaacgaaggtgtggctgtagttttggttcac
gatcagaagaagaatttctacaagaaattcctttacgagccgttccctgttgagtcgagc
ttgttacaagtgttggccgaccatctcaacgccgagattgtggctggcactgtccgctcc
aaacaagatatactggactatttaacgtggacttacttcttccggagactgatgcggaac
ccttcctactataatttggaaagcttagagccacaagatgtcaactactacctgtctaac
ttggttcagacgtctgtggaagcgctctttgacgcggggtgtgttgagatacaggaggac
gaacgcacaattgagactacgtggaaaggtcgtattgcatcctactactatctgtcgcat
aagacaatgacgcacttcactcgaaacttgcatcgagatctagacatagacgcattgctg
cgtgtgctgtctgattgtgaggagtacgccaccctgcctgtcagacacaacgaggacgtt
cttaacggagaactatcccaatcatgccgactccctgtggattcattatctctggactca
tcccatgtgaaaacattcctgttgctgcaagcgcatttgacacgactgccactgccaaac
accgactaccttaccgacaccaaatctgtactggatcagactgtcaggatcattcaggca
atgatagacacgtcggcggaacacggctggctgtctgtgtgtctgtcctgtcagatgttg
atgcagagtatcgtgcaagcgcgctggcccgccgactcacccttgaccactctgccgcac
atcgagccgcagcatctgtacatgttcacccagatgactagggacacgaacaagccgtgt
actgtgctcaacggtctgaaggtgtccatgaggagctacgagggactggcgaggtatctt
cggcgggagtttgatgaaaaccaaattgagcagatatataaggcaattaacgacctacct
acgctagacataaagttgtttgtccgtgggttatggttcgacagcgacggagaacaacaa
aagcccgtgcgccagccaatgaccagagaccagtggatacccctacatgctgatcaggag
tacacgctagtgttggagatgcaccgtcgcggaggtaacccgaactccgtcatgtgtccc
agattcccgcgcgccaagaacgagggatacttcgtcacactcggcaccgtggagtacggg
gaactacacgcgctcaaacgaacgccgccgagaggcaccgcgcagattaccttctatacg
ccttctaacacaggtcgtatcatctacaccatatacataatgagcgacagctacctggga
ctcgatcaacaatacgatcttcattttgaaattattgacgccataccaccagaaactgta
gaacgagcgtatgaaccagataaattgttgttggaataa
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integrated database retrieval system
