Leptidea sinapis (Wood White): 126971621
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Entry
126971621 CDS
T09272
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126971621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126971621
03036 Chromosome and associated proteins [BR:
lsin03036
]
126971621
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126971621
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126971621
mRNA degradation factors
5'-3' decay
Decapping complex
126971621
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126971621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DS
AAA
Motif
Other DBs
NCBI-GeneID:
126971621
NCBI-ProteinID:
XP_050673936
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All DBs
Position
24:3340081..3348644
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AA seq
440 aa
AA seq
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MMTESRISSSNHVGNSMNNQKGELDKTLEDIGWKSKLKVPPKDRRIKTSDVTDTRGNEFE
EFCLKREILMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQID
PKKDCIQALVVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII
ATPGRMIDLMDKQVAKMEHCRILVLDEADKLLSQDFKGMLDMVINRLPKERQILLFSATF
PLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF
CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDV
QAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPI
PKVIDPALYVARPEDDNGDK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagaaagtagaattagctcgagtaatcatgtaggcaatagcatgaataatcag
aaaggagaacttgataaaacactagaagacattggatggaaatcaaaattaaaagtaccc
cctaaagacagaagaataaagacaagtgatgttactgacacaagaggaaatgaatttgaa
gagttttgccttaaaagggaaatcctcatgggtatttttgaaaaaggttgggagaagcca
tctcccatacaagaggcttcaatacctattgctttaagtggaaaggatgtccttgcaaga
gctaaaaatggcacaggcaaaacaggcgcttattgtattccagtcttggaacagattgat
ccaaagaaagattgtattcaagcattagtcgttgtaccaactagggagttagctttacag
acatcacaaatttgtattgagttggctaaacatacagacattcgtgtgatggtaacaaca
ggaggcacaaacttgagggatgacataatgcgtatatatcaaaatgttcaagtgataatt
gccacaccaggccggatgattgatctcatggataaacaggtagcaaagatggaacattgc
aggatcctggtactagatgaagctgacaagcttctatcccaagacttcaaaggcatgttg
gatatggtcatcaaccggttacctaaagaacgccagatcttgcttttctcagcaactttc
ccattaagtgtaaagcagtttatggagaagcatctccgagaaccatatgaaattaacctg
atggaagagttgactctcaagggagttacacaatactatgcttttgtgcaagagagacaa
aaagtacattgtttaaacacactattttctaagctgcaaattaaccagtcaataatcttc
tgcaattcaacgcaacgagtggaactgttggcaaaaaaaataacagaactgggatattgc
tgttactacattcatgcaagaatggctcaagcgcaccgtaacagagtgttccatgatttt
cgtgcagggctgtgccgtaacttagtgtgctctgatttattcactagaggtattgatgtg
caagccgtcaatgtcgtcatcaactttgacttcccgcgcatggcagagacatacctgcat
cgcattggacgctcaggtcgctttggtcaccttggtatcgctataaatctaatcacttat
gaagaccgttttgctcttcatcgcatcgaacaagaattgggaacagagatcaaacccatc
ccaaaggtgatcgacccggcgctgtatgtggcgcgtccggaggatgacaatggcgacaag
taa
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