Leptidea sinapis (Wood White): 126971742
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Entry
126971742 CDS
T09272
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126971742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126971742
03036 Chromosome and associated proteins [BR:
lsin03036
]
126971742
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126971742
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126971742
Chromatin remodeling factors
BAF complex
126971742
PBAF complex
126971742
GBAF(ncBAF) complex
126971742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
BRK
SnAC
ResIII
HDA2-3
QLQ
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
126971742
NCBI-ProteinID:
XP_050674084
LinkDB
All DBs
Position
24:complement(10488427..10536732)
Genome browser
AA seq
1653 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPTQSPAPPHSPHSPYNQQHVNGPPPVHSPAGPPSNHMP
SSGPPHVPNANGPPGLPQQHPMPPAGHHMVGQHMTGPPGHPIGASTAHPGPNGHPNMPGQ
GPPHGYMQHQIAHMPPGQAPMSMGGGPPPPGSGGQGPPGMPLPMSGPPPHGHPQGMPPMP
PHHNMMPGGYAHTAQSPSGSSTPPGASSGPSGTPPQPPTAQTPPHMLGPQPPTSAANGPP
SSSSMQGSLPASGPDNLNALQRAIDSMEEKGLQDDPRYSQLLAIRARTNSQDPNKPMLSN
FQLNQLKAQISAYRNLARNQPITQHIALMAAGKRTGDSPPECPTPPAQPPSPYGGPQGAG
PGGKTAPEPGRGAGGAPPTPLPMTGQMAPPTVPTPPLVNPPLGGGPPPLRGAAPLRPAGP
GGPGGQPMQQQWELKTQPGAPTPGAKQNRVTSIPKPVGIDPLQILNERENRIAARIAHRM
EVLANLPMVSLPDDLRLQAQIELRALRVLNFQKQLRAEILGQVRRDTTLETAVNIKAYKR
TKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLQTVLQHAKDFKEYHRNNVAKLSRIN
KGIMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI
ASLTEMVKQHKQEQRKKQQEEERRKRKSRKRKALEGGEIDAMDDSSQTSDSRVAVMDSKT
GEVLKGEEAPLLSQLRDWLDTHPGWEMLSDSDDSGDDSQDDERRDRRDRHRDERSDKEKT
DEERARDMIKKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASILVNGKLKEYQIKGLEWL
VSLFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKW
APTVVVVSYKGSPQSRRLVQSQMRSTKFNVLLTTYEYVIKDKAVLAKVPWKYMIIDEGHR
MKNHHCKLTQVLNTHYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNA
PFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQR
VLYKHMQSKGVLLTDGSEKGTKGKGGAKALMNTIVQLRKLCNHPFMFPHIEEKFCDHVDS
GGSIVTGPDLYRVSGKFELLDRILPKLKQTGHRVLVFCQMTQCMTIMEDYLGWRGFQYLR
LDGMTKAEDRGELLKKFNDVGSEYFLFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQ
AQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQ
FLQSILHQDGDDEEEENEVPDDDLINEMIARSEEELEIFKQIDIERKKNETQSRLIEESE
LPDWLVKHDDEVVCNKAQGWNYLDEDETLGRGSRQRKEVDYTDSLTEKEWLKAIDDEFEE
EEEDDDDEVLDKKRKKGRKRRRNQEDSEEEETPSSSKKKSKTEVNQLKKRLKSIMKKVID
YTDEHSNGRQLSEPFMKLPSRRELPDYYDIIKKPLDIKKIMYRIEEGKYMDITDLERDFF
TLCANAQTYNEEVSLIYADSVRLRNVFIEIRRRYESGQNSDASDDNEKDEDDSDGESNRS
MKMKIKLKGKSKSTPRKRKQRKYISDDEDYDED
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccgtcccctcaaagcagccccatgcccccgccgcaggcaccaagccctatg
gggcctcctacacaaagtccagctccaccgcattctccgcatagtccttataatcaacaa
catgtaaatggtccaccaccggttcactctcctgctgggccaccgtccaatcatatgcca
tcttcggggccaccccacgtccctaacgcaaatggtccaccaggtttaccacagcaacat
cctatgccacctgctggccatcacatggttggacagcatatgaccggtccgcctggtcat
cccatcggggcttctacagcacaccctggcccaaatggacaccctaacatgcctggtcaa
ggaccgcctcatggctacatgcagcatcaaattgctcacatgcctccagggcaggcgccg
atgagtatgggtggaggaccgcctcctccaggcagtggagggcagggacctccgggcatg
ccgctaccgatgtcgggtccaccgccgcacggacacccgcaaggaatgccaccgatgccc
ccccaccacaacatgatgcccggtggatatgcccatactgcccaatctcccagcggatcc
tccacgcctcctggtgcatcaagtggcccgtcaggaacgcctccccaaccgcctacagct
caaacaccaccccacatgctcggccctcaacctcccacatcagccgctaacggccctcca
tcctcgtcttcgatgcagggatccctgcccgcttcgggccccgacaatctgaatgctctt
cagcgtgctatcgactccatggaggagaaggggttgcaagacgatccgagatactcgcag
ctgttggcaatacgagcacgaacgaattcgcaagatcctaacaaaccaatgctttccaac
tttcaactaaaccaattaaaggcacagataagtgcatatcgtaatttggcgaggaaccaa
ccgattacacaacatatagctctgatggcggccgggaagcgcacgggtgattccccaccc
gagtgccccacgccaccagcgcagcctccgtctccgtacggcgggccgcagggcgcaggc
cccggcggcaagacggccccggagccaggtcgcggcgcgggcggggctcctcccacgcca
ctgccgatgaccggacagatggcgccgcccactgttccaacaccaccgcttgttaatccg
cctctgggaggagggcccccacccctccggggcgcagcgccgcttcgcccagctggacca
ggtggtcccgggggacaacccatgcagcaacagtgggaactgaaaactcagcctggcgcg
cctacaccaggagcaaaacagaatcgtgtcacaagtattcctaagcctgttgggatagac
cctttgcagatattaaatgaaagagagaataggatcgcagcgcgcatcgcacaccgtatg
gaagttctggcgaacctgccgatggtctctctgcccgatgacctccgactacaagcacaa
attgaactcagggctctgcgagttcttaatttccaaaagcagttacgagccgagatattg
ggtcaagtccgtcgcgatacaactctagagacggcggtcaacatcaaagcatacaagcgc
accaagcgtcaggggctgcgggaggcacgcgcgacagagaaactcgagaaacagcagaag
ctggaagccgagaggaagcgacgccagaaacaccaggagttcctgcagactgttttacag
catgccaaggacttcaaggagtatcaccgtaataatgtggccaagctgtcgcgaatcaat
aaaggcataatgaactaccacgccaacgccgagcgggaacagaagaaggagcaggagcgt
atcgagaaggaacgtatgaggcgtctaatggccgaagatgaagagggttaccgaaagctg
atcgatcagaagaaagacaagcgtctggcgttcctgctgtcgcagacagacgagtacatc
gccagcctcacagagatggtgaaacagcacaagcaggagcagcgcaagaagcagcaggag
gaggagaggaggaagagaaaatcgcgaaaacggaaagcactggaagggggcgaaattgat
gcaatggatgatagctcacagacttcggactcgcgtgttgctgttatggattctaagact
ggagaggtattgaagggcgaagaagcgccgctgttgtcacaactacgggattggttggac
acacaccccggctgggagatgctgtcggactcggatgactcgggtgatgacagtcaagat
gatgagaggagagacaggagagatcggcacagagatgaaaggagtgacaaagagaaaact
gacgaggagagggctcgggacatgatcaagaaggcaaaggtcgaggatgatgaatacaaa
actgaagaacagacatactacagcatcgcgcacaccgtacatgagtcggtcacggagcaa
gctagcatcttggttaacgggaaactcaaggaataccaaattaagggtctggaatggctg
gtgtcattgttcaacaacaatctgaatggtatcctggctgacgagatgggactggggaag
actatccaaacaattgctctggtcacatacctgatggagaagaagaaagttaatggacca
tttttaattatcgtcccactcagtactctgtcgaactgggtgttggagtttgagaagtgg
gcccccaccgtggtggtggtgtcgtacaagggctccccgcagtcgcggcgcctcgtgcag
agccagatgcgttctaccaagttcaatgtactgctcaccacctacgagtacgtcatcaag
gataaggcggtcctcgccaaggtgccgtggaagtacatgataatcgacgaaggtcaccgc
atgaagaaccaccactgcaagctgacgcaggtgctcaacacgcactacatcgcgccgcac
cgcctgctgctcacgggcacgccgctccagaacaagttgcccgagctgtgggcgctgctc
aacttcctgctgccctccatattcaagagctgctccaccttcgagcagtggttcaacgcg
ccattcgccactaccggtgaaaaggttgaactgaacgaggaggagacgatacttataatc
cgacgtctgcataaagtactgcggccgttcctgctgcggaggctcaagaaggaggtggag
agtcagctgcccgacaaagtggagtacatcatcaagtgcgacatgagcggcctgcagcga
gtgctctacaaacacatgcagtcaaaaggtgtgctgctaacagacggttcggagaaaggc
acaaagggcaagggcggcgccaaggcattgatgaacacgatcgtgcagctccgcaaactg
tgcaatcatcccttcatgttcccccacatcgaggagaagttctgcgaccatgtggactct
ggaggcagcatcgtgactggaccggatctctaccgtgtctccggcaagtttgagcttctg
gaccgcatattgcccaagcttaagcagacgggacatcgcgtgctagtgttctgtcagatg
acgcaatgcatgactatcatggaggactatcttggatggagaggcttccagtatctcagg
ttggacggtatgacgaaggcagaagatcgcggcgagctgctgaagaagttcaacgatgtg
ggctccgagtacttcctcttccttctgtccacgcgcgccggggggctcggtctcaacctg
cagagcgccgacaccgttattatattcgactcggactggaacccgcatcaggatctgcaa
gctcaagaccgcgcccatcgtatcggacaacgcaacgaagtgcgcgtgcttcggctcatg
accgtcaactctgtggaagagaggatactggctgcggcgcggtacaaattaaacatggac
gaaaaagtaattcaagcgggaatgttcgatcaaaagtctacgggatccgagaggcagcag
ttcttgcagagtatcctccaccaagatggagatgatgaagaggaagagaatgaagtgcca
gacgatgatctgatcaatgagatgatagctcgctccgaggaagagctggaaatattcaag
cagattgacatagagcgaaagaagaacgagacacagagcagactcatcgaggagtcggag
ctacccgactggctggtcaagcatgatgacgaagttgtctgcaataaggctcaaggttgg
aactacctggacgaagatgaaacgctgggtcgaggatcgaggcagcgcaaggaggtggac
tacacggactcgctgacggagaaggagtggctgaaggcgatcgacgacgagttcgaggaa
gaggaggaagacgatgatgacgaggtgctcgacaagaagaggaagaagggccggaaacga
cggcgcaaccaagaagactctgaagaagaagaaacccccagttcctcaaagaaaaagagc
aagacggaagtcaatcaattgaagaagcgccttaaaagtattatgaagaaggttattgac
tacactgatgaacacagcaacggccgccaactgtcggagcccttcatgaagctgccttca
cgccgagaactgcccgactactacgacatcataaagaaacctctcgatataaaaaagatt
atgtatagaattgaagaggggaaatatatggacattacggatttggagcgcgatttcttc
acactgtgcgcgaatgcccagacctacaacgaagaggtgtcgctgatatatgcggactcg
gtgcgactgcggaacgtgtttatagagatacggcggcgttatgagagcgggcagaactct
gacgcgtccgacgataatgaaaaagatgaagatgattcggatggtgaatccaaccgttcc
atgaaaatgaaaataaaattgaaaggaaagagtaaaagtactccccgcaaacgtaaacaa
cgcaaatacatctccgacgatgaagattatgatgaggattaa
DBGET
integrated database retrieval system
