Leptidea sinapis (Wood White): 126971834
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Entry
126971834 CDS
T09272
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsin01009
]
126971834
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126971834
Protein phosphatases and associated proteins [BR:
lsin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126971834
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
126971834
mRNA cycle factors
Stress granule specific factors
126971834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
126971834
NCBI-ProteinID:
XP_050674237
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All DBs
Position
24:13009092..13059952
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AA seq
816 aa
AA seq
DB search
MMHHPNMHHQPMSGHPPQHIPGHQGLPPHHQLPPHQMHRENRHVTLTRVPLGPSAGGGGM
GGHGRMSGMGSMSVPPQHHQPPSQRQPHPIRSMHHQPAQHHSVPPQQGRPLRRYPMSGYI
ASGAVPCPHAPHHAAHSNHPLHTARAANNTLPTTGLRRQPSPIRLVQPKHNVGFGITTVS
ANANVLTKEQTQKEEDNKGTSGAGAVAEPKSDMETQAGAGENEANRPSANMANSKEKTPM
CLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGDTDEYTAEGSSIKRAQHAAASAA
LTSTRYPPPPPRAPPATSAHSHHSRHNGAVMPTVELNALAMKLCQPAVYCTVAPIPGRVR
PRAPPFRVPCMPYPPPPSLIDPGPPLIYRVRVCVGGRAWLGEGSSPQAARHDAAARALLD
LRPQHPSPDPPVAGETEADLLNSEVKSPVSLVHELALKRNLNVIFSVKSERGPPHMRVFI
TVCKVGDMETEGEGNGKKVSKRRAAECMLEEMKRRWPPSILRSKPAQDKRRHVPVKKKPR
NLIKEGAALDGSAESGVGSAVGSGASALDNPISKLAVARHAARARSPQYRVLEERGAARR
REFLVQCDAPPHCATGLGPNKKTAKRRAAHNVLLAMEMASSGEHATGTATADTATNGAGD
SMNNTADAKRKQSEVSAGGAGGESRQPVPGVLMVDYHARSSQANGVNVSESSVVGGGGSS
PGAKEQLMYLSKIADFTVQFSDFPKRNHGEYLSLVSLSTSPPVMCHGGGASTALSHEQCA
RAALRALALMGVDTRHPGQSPPGTGANSAITNGVSE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatcacccgaacatgcatcatcagccgatgtctgggcatccgccgcagcacatt
ccaggccatcagggattgcccccacatcaccaactgccgccgcatcaaatgcatagagaa
aacaggcacgtaacgttgactagggtgccgttaggtcccagtgcggggggtggaggaatg
ggtggccacggccggatgagcgggatgggctcaatgtcagtaccgccgcagcatcatcag
ccaccttcgcagagacaaccgcatcccatcagatcaatgcaccatcagccagcgcaacac
cactctgttccaccgcaacaaggtcgtccgctacgtcggtacccaatgagcgggtacata
gcatcgggtgcggtaccgtgcccgcatgcgccgcatcacgccgcgcattcaaaccacccc
ttgcataccgcgcgggccgcgaacaacacgctaccaactacaggtctgcgcagacagcca
tcgccaatacggttggtgcaaccaaagcacaacgtcggctttggtataacaacagtgtca
gcgaacgccaacgtactaacaaaagaacagacacaaaaagaggaagataacaaaggcacg
agcggcgcgggagcggtagcggaaccgaagagtgatatggagacacaggcgggagcgggc
gagaatgaggcgaatcgcccgtccgctaacatggccaacagtaaagagaagacaccaatg
tgcctggtcaatgaattggccaggtacaataagattaagcatcaatatcgcctcacatca
gagacagggcccgctcacaaaaaagtattcacagtgacgttacgtctgggtgacactgat
gagtatacagcagaggggtcgtccatcaagcgcgcgcagcacgcggccgcaagcgcggcg
ctcaccagcacgcgctacccgcccccgccgccccgcgcaccgcccgcgacgtccgcgcac
tcgcaccactcgcgacacaacggtgctgtgatgcccacggtggagctgaacgcgttggcc
atgaagctgtgccagccggccgtgtactgcacggtggctcccatcccggggcgtgtcagg
ccgcgtgctcctccgttccgtgtcccgtgcatgccctacccgccaccgcctagcctcatc
gaccccggaccgccgctcatatacagagtgcgcgtgtgtgtcggaggtcgcgcgtggctc
ggcgagggaagcagcccgcaggcggcgcgacacgacgcggccgcacgagcgctgctcgac
ctgcgaccgcagcatccgtcacccgacccgcccgttgctggagaaaccgaggctgacttg
ttgaactctgaagttaaatctcctgtctcgctggtgcatgagctcgctctcaaacggaat
ctcaacgttatcttttccgtcaagtcggagcgaggaccgccacatatgagggtgtttata
acggtgtgcaaagttggtgatatggagacagagggtgagggcaacgggaagaaagtatcg
aagcgacgtgcggccgagtgcatgctggaggagatgaagcgacgatggcctccgagcatc
ctccgcagcaagccggcgcaggacaagaggagacacgtgcccgtcaagaagaagccaagg
aatcttatcaaggaaggtgcggccctcgatggtagtgctgagagcggcgtgggcagtgcg
gtgggcagcggcgcgagcgcgctcgacaacccgatatccaagctggccgtggcccgccac
gcggcccgcgcgcgctcgccgcagtaccgcgtgctggaggagcgaggcgccgcgcgccgc
agggagttcctggtgcagtgtgacgcgccgccgcactgcgccaccgggctggggcccaac
aagaagacggccaagcgacgcgccgcgcacaatgtattattagcaatggagatggctagt
tcaggagagcatgctacgggaacagccaccgcagatacggcgaccaacggggcgggagat
tcaatgaacaatactgctgatgctaaacgaaagcagagtgaggtgtctgcgggaggtgca
gggggcgagagtcggcagcctgtccccggtgtgctgatggtggactaccacgcgcgcagc
agccaggccaacggtgtgaacgtgagtgagagcagcgtggtgggcggcggcggcagttcg
cccggcgctaaagaacaactcatgtatctctccaagatagcggacttcactgtgcaattc
tcagactttcccaagcgcaaccacggcgagtacctgtctctggtgtcgctgtccacgtcg
ccgcccgtcatgtgccacggcggcggcgcctccaccgcgctctcccacgagcagtgcgcg
cgggccgcgctgcgggctctcgcgctcatgggcgtcgacacccgccacccgggacaaagc
ccgccaggaacgggcgcgaacagtgcgatcacaaacggagtatcggagtga
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