Leptidea sinapis (Wood White): 126972051
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Entry
126972051 CDS
T09272
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04145
Phagosome
lsin04512
ECM-receptor interaction
lsin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126972051
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126972051
09142 Cell motility
04820 Cytoskeleton in muscle cells
126972051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126972051
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsin04147
]
126972051
00536 Glycosaminoglycan binding proteins [BR:
lsin00536
]
126972051
Membrane trafficking [BR:
lsin04131
]
Endocytosis
Phagocytosis
Opsonins
126972051
Exosome [BR:
lsin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126972051
Exosomal proteins of colorectal cancer cells
126972051
Exosomal proteins of bladder cancer cells
126972051
Glycosaminoglycan binding proteins [BR:
lsin00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126972051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
cEGF
GumK_N
Motif
Other DBs
NCBI-GeneID:
126972051
NCBI-ProteinID:
XP_050674582
LinkDB
All DBs
Position
25:complement(7744100..7779225)
Genome browser
AA seq
1135 aa
AA seq
DB search
MASRPAGAHICHFLVLVLAVANSVSLSFDEEATNDAIASSSATHGAVVIVLRGPSDRGSR
REQLIHGKVTDENAFSLFYSAKSNKVSLENLHGGHLKSVSWGLGSHPREHLILVITHDRV
KLYVGCQPLHWHPMSGRHDVLNLLATPLFKLYHEENAPVQIYDDEKAALTSLNCDHHELY
PPTLTTMDSDVEEVRDFIAKEERLKKEEQMQGDDYRNNYINPNILPVPQSTTPSEFRGDI
PATDIESCDDEVIRQLKLLRQIIETLRRELADQKGTIDGLKNQLRLCCNRVPAPAPVERC
SGSSCYPGVECRNTVSGPECGSCPHGMEGDGRRCRPISCDRRPCSQGEYCTDTERGYRCE
RCPGRQTSDGQTCRTPCSSNPCFGGRVQCQDTPDGRYRCGPCPAGFTGNGEECSRISCRH
ISCYQGVECQETGSGPRCGPCPDGFMGDGQRCQHICDARRPCGERRCIPTSGSPYYECEG
CSKGYAWNGYSCVDMDECDLIRPCDELVSCSNVEGGFICGACPPGFEGSSGWQGSGDEGR
RERCVDIDECSDGNEPCPRGRLCVNTPGSFTCVPCGGNFYVNTSRPCIDVGDLVQRCDPA
RCRRYNAVCGYGPACVCATGWAGNGTVCGPDRDLDGYPDHQLPCTDLHCKADNCPDVSNS
GQEDADKDGLGDSCDPDRDGDGIPNIPDNCPLTANPDQLDRDEDRSDKRGDACDNCPRRF
NPGQEDADRDGLGDVCDPDMDNDGILNEDDNCPRVYNPQQEDMDGDRFGDLCDNCPRVRN
PSQEDADRDNVGDACDSDVDRDQDGIQDGLDNCPNLANSDQQDVDNDGKGDACDDDIDGD
GIPNLEDNCPLVHNPDQLDTNGDGIGNACDNDNDGDKVTNDLDNCPNNSKIFRTDFRNYM
TVRLDPEGTSQQDPNWEIANEGAEIIQTLNSDPGLAVGFDNFGGVDFEGTFFVDSQIDDD
YVGFIFGYQNNKRFYVVMWKKNTQTYWQTTPFRAVAEPGIQLKLVNSKTGPGKTLRNSLW
NTESTPDQVTLLWKDPRNVGWREKTAYRWRLLHRPKIGLIRLKIYENNRLVADSGNVYDY
TLKGGRLGVFCFSQEMIIWSNLVYRCNDKIPSNIVSELPNRLLKKLEIDHDFVYA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgacctgcgggagctcatatttgccacttcctggtgcttgttttagctgtg
gctaattcggtttccttgagctttgacgaggaagcaacaaatgatgccatcgcgtcgtca
tcagcaacgcatggtgcagtggtgatcgtgctgagaggacccagcgatagaggatccaga
agggaacagctaattcatggaaaagttacggacgagaatgctttctcgctcttctacagt
gctaagagcaacaaagtatcgctggaaaatttacatggcggtcatttgaagtcagtatcg
tggggcctgggctcacatccacgagagcatctgatcctggtcatcactcacgaccgagtc
aagctatatgttggctgtcaaccgttgcattggcacccgatgtccggtaggcacgatgta
ctcaatctgttagccacgccgctctttaaattgtaccacgaagaaaatgccccagtgcaa
atatacgacgatgaaaaagcggcactaacatcgttgaactgtgaccatcatgagctttac
ccacctactctaacaacaatggattcagacgtagaggaagttagagattttattgcaaaa
gaagagagactgaagaaagaagagcaaatgcagggcgatgactacaggaataattatata
aatccgaatattctaccagttcctcaatctactacaccctcggaatttaggggagatata
ccagctaccgatatcgaatcgtgtgacgacgaagtaatccgccagttaaaactgcttcga
cagataatagaaacgctacgtcgagagttggctgatcaaaagggaacaatcgatgggttg
aaaaaccaattgcgtttgtgttgcaatcgagttccagcaccggcgccggttgagagatgt
tctggctcttcatgttaccctggtgtggaatgccggaataccgtgtctggtccagaatgt
ggatcctgtcctcacggcatggagggagatggaaggagatgcagacctatatcttgtgat
cgacgtccttgctctcaaggagagtattgcactgacacagaacggggataccgatgcgag
agatgtccaggaaggcaaacgagtgatggacaaacgtgtcgaacaccttgcagttcaaac
ccttgtttcggtggacgtgtccagtgtcaagatacgccagatggcaggtatcgttgtggg
ccctgtcctgccgggtttactggaaacggcgaagaatgttctagaatatcctgcagacac
atttcatgttatcaaggtgtcgaatgtcaagaaacaggttctggaccacgttgtggcccg
tgccctgatggattcatgggtgatggacagagatgtcaacacatctgtgacgcgaggcgg
ccatgtggggaaagacgctgtatccctacttcgggtagtccttactatgaatgcgaggga
tgctccaagggctacgcgtggaacggttactcatgcgtggacatggatgaatgcgatctt
atcaggccctgcgatgagttggtgtcatgcagcaatgtagagggtggtttcatctgtggg
gcgtgtccgcccggatttgaagggagctcgggatggcagggatccggagacgagggaagg
agagagcgctgtgtcgatattgatgagtgctctgacgggaacgagccgtgtcctcgtggt
cgactgtgcgttaataccccgggatccttcacgtgtgtaccatgtggtggtaacttctac
gtgaacacctctcggccctgcatcgacgtgggtgatctggttcaacgctgcgacccagcc
agatgtcgccgatacaacgcagtatgtggatacggaccagcatgtgtttgtgctactggc
tgggctggaaatggaacagtttgtggtccagacagagatctagatggatatccagaccac
cagttgccttgcacagatctacattgtaaagcagataattgcccagatgtttccaattct
ggtcaagaggacgctgataaggacggtcttggggactcttgtgatccagatagagacgga
gatggcatccctaatatccctgataactgtccactgaccgcaaaccctgaccaattggac
cgtgatgaagatcgtagcgacaaacgtggcgatgcctgcgacaactgtccgcgacgtttt
aaccctggtcaggaagatgctgaccgagatggacttggagacgtttgtgaccctgatatg
gataatgatggtatactaaatgaagacgataattgccctcgtgtgtacaaccctcaacaa
gaggatatggatggagatcgtttcggtgatctctgtgataactgccccagagtgcggaac
ccgtctcaagaagatgcagacagggataatgttggagatgcctgtgacagtgacgtggac
agagaccaagacggcatacaagacggattggacaattgtccaaatttggccaacagtgac
caacaagacgtagacaatgacggcaaaggtgacgcgtgcgatgatgatattgatggtgat
ggtatccccaacctggaagataattgtccactggtacataaccccgatcaactggacact
aatggtgatggtattggaaacgcatgcgacaatgataatgatggtgacaaagtaacgaat
gatctggataactgtccaaataactccaaaattttccgtactgactttagaaattacatg
actgtccgtttggatcccgagggaacatcgcagcaggatcccaactgggagatcgctaat
gaaggtgccgagatcattcagaccctcaactcagatcctggacttgcagtgggcttcgat
aactttggtggagttgatttcgaaggaacattctttgttgattcacagatagatgatgat
tacgttggatttatatttggatatcagaacaataagcgattctacgtagtgatgtggaag
aagaacacacagacgtattggcagaccacaccattccgagcagtcgctgaacccggcatc
cagctcaagcttgtcaactccaagactggaccagggaagaccctgagaaactccttgtgg
aatactgagtctactcctgatcaggtaacactgctatggaaagacccacgcaacgtgggc
tggcgtgagaagacagcgtacaggtggagattgctgcacagaccgaagataggattgatc
aggctcaagatatacgagaataaccggctcgtggcagactctggcaacgtatatgactac
actctgaagggcggaagacttggagtcttctgtttctctcaagaaatgatcatttggtct
aatttagtttacagatgtaacgataaaataccatcaaacatagtgtctgaattaccgaac
cgattgctgaagaaattggaaatcgaccacgacttcgtttacgcgtga
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