Leptidea sinapis (Wood White): 126972158
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Entry
126972158 CDS
T09272
Name
(RefSeq) protein wech
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lsin
Leptidea sinapis (Wood White)
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126972158
04121 Ubiquitin system [BR:
lsin04121
]
126972158
Enzymes [BR:
lsin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126972158
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126972158
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
126972158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
SGL
zf-B_box
PML_CC
Beta-prop_IFT122_1st
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
126972158
NCBI-ProteinID:
XP_050674716
LinkDB
All DBs
Position
25:complement(9525766..9565435)
Genome browser
AA seq
779 aa
AA seq
DB search
MTSFANMSQSLAASLPATSSSSGSNHNSTEQEDPLAMSNIICSLLENMNKPSSLQQSAAS
NPTVPYDIWALPSCSTLQNPNIGNSSREYASTSNNNNQSHVKEDTSSGSLGTSSSVSITC
FRCEERTPTTRCLECNDLYCHDCCHKVTSDCQLREHTLLPIHQISPIGARPNSVTNDKEV
MYCELHCDPVRYYCEACIIFICQECTLWVHKDHCYSPIKGALDMCRIGVFRAIEDTKTGT
KAIKTAIDRAVAMSKAYEKETAEANMKIRKAMRCFAQAIEDREKYLLDKVEKMRQAKMNE
LTDHMNTLRGILAGLAHTNETLVRSMDSEGIELFMAKEKGRAQVDYFSCMFKNMYTTEER
IMFIPPNYDLVDQIKRQCDVQSALVNPIHALNPSSSIQSRQSLLHSLQSAQSYPSQTYQN
MSANSSLRSLPDYTTSHTRSTNYYDHSISSSIAMDSSAARGTGQAIPGYWNSVSVKPTRS
PVPGVPMFSFGREGQEEGQVSRPWGLCVDREGNIIVADRRNNRIQIFNNRGEFRTMFGSK
GTGPGEFDLPAGITTDTYGRIIVIDKDNHRVQIFTSSGNFILKFGSFGKECGQFQYPWDV
AVNTLGSIVVTDTRNHRIQLFTSDGTYITKFVFEGANPAKLLKGPTTPRGVCFTTSGNII
VSDFENHRLLMVDPTLSKVLHCVGREGSGIGELNRPSGIVTDDGGLIIVADSKNHRVLVF
TSELRILWAVDLKSPGLDDKDRPSDVALTPEGYLVVLFETLPDTARDISSHGKQYIKVY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttcgcaaacatgagccagtcgctggcggcgagtctgccagccacctccagc
tcatcagggtctaaccacaacagcaccgagcaagaggacccgcttgccatgtctaatatc
atatgcagcctcctcgagaacatgaacaaaccctcgagtctacaacagagcgctgcgtcc
aaccccacagtgccctacgacatctgggcgctcccctcctgcagtaccctgcagaaccca
aacattggaaactctagtcgtgagtatgcatctacgtcaaataacaacaatcaaagtcat
gtcaaagaagacacttctagcggctcgctcggcacttcatcttccgtctctatcacctgc
ttccggtgcgaagagcgcacaccgacaacccgctgtctggaatgcaatgatctgtactgt
cacgactgctgccataaggtgacttcggactgccaactacgtgagcacaccttattacct
attcatcaaatatcgcctattggggcgagaccaaactctgttaccaacgataaagaagtg
atgtactgcgagctccattgcgaccccgtaaggtattattgtgaagcttgcattatcttt
atttgtcaagaatgcactttatgggtgcacaaagatcactgctattctcccataaaaggt
gcgcttgacatgtgtcgtattggagtatttagagctatagaagacacaaaaactggcaca
aaagcgataaaaactgctatcgatcgtgctgtggccatgtcaaaggcttatgaaaaggaa
acggcggaagcgaatatgaaaatcagaaaagctatgcggtgtttcgcgcaggctattgag
gatcgagagaagtatcttctggataaggttgagaaaatgcgtcaagcgaagatgaatgaa
ctgactgatcacatgaacaccttacgtggtatattagctggtcttgcgcataccaatgaa
acattagttcgcagtatggattcagaaggcatcgagctatttatggcgaaggaaaaaggg
agagctcaagtggattatttctcctgtatgttcaaaaatatgtacacaactgaagaacga
attatgttcataccacctaattatgatctagttgatcaaataaaaagacagtgtgatgtc
caatcggctcttgttaaccctatccatgccttaaatccttcatcatcaatacaatctcgt
caatctttgctgcattcgctgcaatctgctcaatcgtatccatcgcaaacgtaccaaaat
atgtctgctaatagcagcctccgatcgttgccagactatacaacgagtcacacacgatct
accaattactatgaccacagcatttcatccagtatcgctatggattcaagcgcggcacga
ggaacaggacaggcaatacctggatattggaattctgtgtcagtgaagccgaccaggagc
ccagttcccggcgtcccaatgttttcgtttggcagagaaggccaagaagaaggccaggta
tccagaccttgggggttgtgtgttgatagagagggcaacataattgtagcggatagaaga
aacaaccgcattcaaatattcaacaatcgtggagaattcagaacaatgttcggttcgaag
ggaaccggacctggcgagttcgatttaccagctggtataactacggacacttacggacgt
attattgttatagataaggataaccatagagtacagatttttacttcttcgggtaatttt
atcttaaaatttggatcgttcggtaaggaatgtggacagttccagtatccttgggacgtt
gctgtaaatacgcttggtagtatagttgtaacagatactcgtaatcatcgcatacaattg
ttcactagtgacggtacttatataactaagtttgtgttcgaaggagctaatcccgctaag
ctattgaaaggtccgacgactcctcgcggagtgtgctttaccacttcgggtaacataatc
gtatccgattttgagaaccatcgtttgctgatggtggaccccacgctgtccaaagtgtta
cactgcgtggggcgcgagggttcaggcatcggcgagcttaaccgcccctcgggcatagtg
acggacgatggtggcctcataatcgtggctgattcaaagaatcaccgcgttctggtattc
acgtcagagctccggatactgtgggccgtagacctcaagagccccgggctcgacgacaag
gacaggccgagtgacgtcgccctcactccggagggctacctggtcgtactgttcgaaacg
ttgccggacaccgcgcgcgatatttcctcccacggcaagcaatacatcaaggtatactga
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