KEGG   Leptidea sinapis (Wood White): 126972396
Entry
126972396         CDS       T09272                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03013  Nucleocytoplasmic transport
lsin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126972396
  09122 Translation
   03013 Nucleocytoplasmic transport
    126972396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsin03019]
    126972396
   03041 Spliceosome [BR:lsin03041]
    126972396
Messenger RNA biogenesis [BR:lsin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     126972396
Spliceosome [BR:lsin03041]
 Complex C
  Other components
   EJC/TREX
    126972396
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    126972396
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40_Gbeta WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st PAC11 WD40_MABP1-WDR62_1st RMC1_N Beta-prop_HPS5 Beta-prop_TEP1_C Tricorn_2nd DSE1_N NBCH_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N TRM82_WD Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_SCAP PD40 Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st Cytochrom_D1
Other DBs
NCBI-GeneID: 126972396
NCBI-ProteinID: XP_050675070
LinkDB
Position
26:complement(2593353..2604178)
AA seq 328 aa
MKESKQNQTPIADLQELRNHFVSHNVIREYIAHSSKVHSVGWSCDGRRLASGSFDKTVVI
FNLERNRLAQDFVFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDARSHKCAAAISTK
GENINIAWSPNGSTIAVGNKEDLVSFIDARNYKVVTEEQFNFEVNEISWNNTSDLFFLTN
GLGCVHILTYPSLELQTVLKAHPGTCICIEHDPTGRFFATGSADALVSLWDVNELACLRV
FSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVAASTFTVAWHPSRYL
VAYACEDKEPPERKRDAGNLKLWGLSNS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaagaatcgaaacagaatcagacgccaatagcagatttacaggaattacgaaatcat
tttgtttctcacaatgttattcgcgaatatattgctcactcatctaaagtccattctgtt
ggctggtcttgcgatgggagacgactagcttcaggatcctttgataaaactgttgtcatt
tttaacttagagcgtaatagattggcacaagactttgtgttcagaggtcacacgggttcg
gtggatcaactatgctggcatgcttcacatccagacctactcagcactgccagtggtgac
aaatctgtcagaatatgggatgccaggtcacataagtgtgcagcagccatatccacaaag
ggagaaaatataaacattgcatggtcacccaatggttcaaccattgctgtgggaaacaaa
gaggaccttgtctcatttattgatgctcgtaattacaaagtggtaactgaggagcaattt
aattttgaagtcaacgagatatcatggaacaatacctctgatctgttctttttgacgaac
ggcttgggatgtgttcatattttgacgtacccgtcgctggagctgcagacggtcctgaag
gcccacccgggcacgtgtatctgcattgagcacgaccccactggccggttcttcgccacc
ggttcagccgacgcgctcgtgtcgctgtgggatgtcaacgagctggcctgcctgagggtc
ttctcaagactggagtggccggtgcgcactctgtcgttcagcttcgacggtcggctgctg
gcgtctgccagtgaggaccacatcattgacattggagacaccgaaactggtgagaaggtg
gcggagatcccagtggctgcgtccacgttcacggtagcttggcacccgtcgcgctacctg
gtggcgtacgcgtgtgaggacaaggagcctcccgagaggaagagggacgccggcaacctc
aagctgtggggcctgagcaacagctga

DBGET integrated database retrieval system