Leptidea sinapis (Wood White): 126972625
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Entry
126972625 CDS
T09272
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126972625
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsin01009
]
126972625
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsin04131
]
126972625
03029 Mitochondrial biogenesis [BR:
lsin03029
]
126972625
Protein phosphatases and associated proteins [BR:
lsin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126972625
Membrane trafficking [BR:
lsin04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126972625
Mitochondrial biogenesis [BR:
lsin03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126972625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
126972625
NCBI-ProteinID:
XP_050675428
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Position
27:10891666..10936031
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AA seq
1360 aa
AA seq
DB search
MLYVFHVDAGQMTTYDMNLTLQSVSSLKAAIERKTKIPSASLVLLVSGGEVLQSDHMVSS
YSAGTDTNPIYMFSKPSVKETHLRQSMCGDLSPIVELSTGEFRSDIRSTFDGKSLAELKS
AVEVCCGLQPNVHTVNSCAALAEQFSDLAHEVSRNCDQLVHEQHLQHQGWAAVVANLEDI
FNEFCERSRSFKESFKKHRLKKEEYHEMLNSLNEVLESLGKIPILSPLQLHAEAHRFSAF
DVFEETEYEGYHYSSNLDSSSETKGMQDFGVGVFKLSDEDVFEQKNVSSNDEGSTEGQVI
EEPEEVVTFKAPSIESKEEPTLLHWILAQGNKASLQDILDYCQKALALIDAEPLKVREAE
LYQILEYANMHGLKQIKGIEDRLYGLDQLLSDVKKLERDQHDQAASIIQCRERLSSVAND
PSVLPTLVQSHCRQLEKLLVGHQKLIDIIRRIAKSKEEMSQVLKARLEAVLRIENSMSVQ
DAHAMLTFQCFNRLARYFGIVSQLHCAPAVFVRAVHEVARRRTFSDAHLQWATDLAGKLL
KIHDEEVNRRQDFNALFEGHFLRSLFPGMTDLPPTFATQAPPAFDIKLPKLSDDDIKVMS
NSFSDLVSHIPTYDMDAVVKFFEQRLQTYNEEKDADVEANKDIESQMETNFDNLSKQCGT
IPKVDTWTTCAPETMAVSTVTEVLTVKSGNGREEFENYEFYIEESLPTSLELGREIRQDN
MDTHKINIEKLQDFFKKICNLCKINVVLIKEELKNLKHDIDEQKRYLGVKFIEIADIWRK
NNEETEVRFREHTQRLTVDHELELSDMKAALSEKDEIINMLKKEKETMKLQHQKDIERLS
SEHDATKVLLERSRDELNDFQKKLDDFETQKVKDIKDMQEKMHLEYKAEIESLRSRFRLV
ALTNNMDRSPSESSLEKIERTDMIEISHHNSIVMQTKENAEVEKEQAVRQSLEKCTAEWE
QKLSAEITLIKAKYEAEKQVTINDVTRRLLSEKDRQLELLREREQMLSKECTKYRDTIQQ
LTDPETNDYDTLLKTQLATLENEKASLQQQIADLKKELEKREEVDKSREDDSDGRSSPRR
EDGKRSRTQCHTPVGLSAGALSLSSCLPGHTVLLLWDPSHLNYTVLQEASIMYFVHSDCL
SALDLSIEVKNESERRLYAIATVEAKEYCYAKKSGNRYQMPRGSRFYRVRVKPCKQHLPH
ATCCENRHKQEIMKSGVLPLIGEPRLLKKWLTYMHAPDSKSVDTSQSTSSATDEANRVEV
ATATLINLESPVSTSDTVRDTSVPAVPSVLCVPAVSADPATVSPVPPQSDLDQPDSIEAS
DQWQSTRMMASTASNITDMECSVGRCLGPEPLEMAEEATP
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgtgtttcatgtagatgcaggtcaaatgaccacatatgatatgaatcttact
ttgcaaagtgtttcaagtttaaaagctgcaatagaaagaaaaacaaagataccatctgca
tctcttgtgttacttgtaagtggaggtgaggttttgcagtcagatcatatggtgtcctcg
tatagtgctggaaccgacactaatcctatctacatgtttagtaagccttcagtcaaggaa
actcatttaagacagtcaatgtgtggcgatctcagtcctattgtagaattaagtactgga
gaattccgtagcgacattcgtagcaccttcgatggaaagtctttagctgagttaaaaagt
gcagtggaagtgtgctgtgggttacaacctaatgtccacacagttaattcatgtgccgca
ctagcagaacagttcagtgatcttgcgcatgaggtttcacggaactgtgatcagcttgtt
catgaacagcatttacagcatcagggttgggcggcagttgttgcaaatttagaagatata
ttcaatgaattctgtgagagatcccgaagttttaaggaatcatttaagaagcatcgacta
aaaaaggaggagtatcatgaaatgttgaatagtcttaatgaagttttagaatcgctgggc
aagattccaatattgtcaccacttcagctgcatgcggaggcacaccggttttcggcgttc
gatgtattcgaggagaccgagtatgagggctaccattatagcagcaaccttgacagcagc
tcggagaccaagggaatgcaggatttcggtgttggtgtcttcaagctgtcggatgaggat
gtatttgagcaaaagaacgtgtcaagtaatgacgagggttcaacggaaggtcaggtgatt
gaagagccagaggaagtggtgacgttcaaggctccttcgatagagagtaaagaggagccc
acgttgttgcactggatactcgcgcaagggaataaggcctccttgcaggatatactggac
tactgtcagaaagcacttgccttgatcgacgcagaaccgcttaaagtacgcgaggcagag
ttgtatcagatattggagtatgccaacatgcacggcttgaaacagatcaagggtatcgag
gataggctgtacgggctcgaccagctgctgagcgacgtgaagaaactggagcgggaccag
cacgaccaggctgcttctatcattcagtgtcgggagcgattgagcagtgtggccaacgat
ccgtcagtgttgccgaccttggtacagtcgcattgcaggcagctggagaaactgctggtc
ggccatcagaaacttattgatatcattcgacgtattgcgaagtccaaagaggagatgtcg
caagtactaaaggcgcggttagaggctgtgctcaggatcgagaactccatgtcggtgcag
gacgcgcacgccatgctcacgttccagtgcttcaaccggctggcgcgctacttcggcatc
gtgtcgcagctgcactgcgcgcccgccgtcttcgtgcgcgccgtgcacgaggtggcccgg
cgcaggaccttctccgatgctcatcttcagtgggcgacagatttagccgggaaactctta
aaaattcacgacgaggaagtgaatcgtagacaggatttcaacgcgttgttcgaaggtcac
ttcctgaggagcttgttccccggtatgactgatttgcccccgacgttcgcgacacaagcc
ccgcctgccttcgacatcaagttgccgaaactgtccgacgacgatataaaagtcatgtca
aactccttctccgatctcgtttcacatataccgacctacgatatggatgctgttgtcaaa
ttcttcgaacaaaggctacaaacatacaacgaagaaaaggatgcagatgttgaagcaaat
aaagatattgaatcgcagatggaaacgaacttcgataacttgagcaaacagtgcggcacc
ataccaaaagtagacacgtggacaacatgcgcgccggagacaatggccgtgtctactgtt
accgaggtactgacggttaagagtggcaacggcagggaagagtttgaaaattacgagttt
tatatcgaggagtcactacctacaagcctggaactgggccgggaaataagacaggacaat
atggatacgcataagataaacatcgaaaagttgcaggacttcttcaaaaaaatatgtaat
ttatgtaaaataaatgttgttttaataaaagaggaactgaaaaatttaaaacatgatata
gatgaacagaaaaggtatttaggtgtaaagtttatagaaattgcggatatttggaggaaa
aacaacgaagaaactgaagtaaggtttcgtgaacacacacagagattgactgtcgatcac
gaattagagttgagtgatatgaaagcggccttatcagaaaaagacgaaattattaatatg
ttaaagaaagaaaaggagaccatgaaactgcaacatcagaaagatatagaaagactgagt
agtgaacatgatgcaacgaaggttttactagaaagaagtagggacgaattgaatgatttc
cagaagaaattagatgattttgaaactcagaaagtaaaagatattaaagacatgcaagag
aagatgcatctagaatataaggcagaaatagaatcgttacgatcaagattccgcctcgta
gcgttaacaaacaacatggatcgttctccgtccgagtcaagtctggagaagatcgaacgt
actgacatgatagagataagtcaccacaactccatcgtgatgcagaccaaggagaacgcc
gaggtggagaaggagcaggcggtcagacagagcctggagaagtgtacggcggagtgggag
cagaagttgagtgcggagataacgctcatcaaagccaagtatgaggctgagaaacaggtg
acaataaacgatgtgacgcgacgcctgctgtccgagaaagaccgacaactggagctgcta
cgagagcgtgagcaaatgctgtctaaggagtgtaccaagtaccgtgacaccatccagcag
ttgacagaccctgagaccaacgactatgacacactgctcaagacacagctcgcgacattg
gaaaatgagaaggcatcattacaacagcagatagcagaccttaagaaagagttagagaaa
agagaagaagttgacaagagcagagaagacgatagcgacggaagatcgtcgccaaggcgc
gaagatgggaaacgatcccgcacccagtgccacacgccggtgggtctgtctgcgggcgca
ctcagtctgtcctcgtgcctgcccggacacaccgtgctgctcctgtgggacccctcgcat
ctcaattacaccgtactccaggaagcatctataatgtacttcgtgcatagcgactgcctc
tcggctctagatctcagtatcgaagtgaaaaacgagagtgagaggcgactctacgcgatc
gcgacggtcgaggcgaaggagtattgttacgcaaaaaagagtggcaatcgttatcagatg
ccgcgtggttcacgcttttaccgcgtgagggtgaagccgtgcaaacaacatttaccgcac
gccacgtgctgcgaaaatagacacaaacaagagatcatgaagagcggcgtgcttcccctg
atcggagaaccgcgcctgctcaagaagtggttgacgtacatgcatgccccagactcaaag
tcggtagacacgagccagtctacgagttcggcaacggacgaagcaaacagagtggaagtt
gcgaccgcaactctcatcaatctcgagtctccagtgtctaccagtgacaccgtacgggac
acttctgtccccgcggtcccctctgtgctctgtgtccccgcagtgtccgcagacccggcc
accgtctcgcctgtccctccccagtcagacctcgaccagccagactccatcgaggcgagt
gatcagtggcagagtacaagaatgatggccagtaccgctagcaacatcacggacatggaa
tgcagtgtgggcaggtgtctggggcccgagccactggagatggccgaggaggcgaccccc
tga
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integrated database retrieval system
