Leptidea sinapis (Wood White): 126972776
Help
Entry
126972776 CDS
T09272
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126972776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126972776
03036 Chromosome and associated proteins [BR:
lsin03036
]
126972776
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126972776
Coactivators
SAGA/TFTC/STAGA complex
126972776
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126972776
STAGA complex
126972776
TFTC complex
126972776
SAGA complex
126972776
SLIK complex
126972776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
VPS8_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_SPT8
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
126972776
NCBI-ProteinID:
XP_050675773
LinkDB
All DBs
Position
27:6960871..6974217
Genome browser
AA seq
652 aa
AA seq
DB search
MGEKSTPLLAVLQLLKKYNLKGTEEILRKEANLGDAQFENLDLPEVELASILSAHHKESD
PLTYESAYESLKKFVENSLDVYKFELSTLLYPVFVHMYLLLILYDHNDHAEKFFEKFSGE
QEDYYQEDLQRLSVVKTKDHIKENEIAEIYSCNKFEVLLSRDTSSQLKRFIHEQKSSPVI
INIINNHIQIDIHDGPGRTQAQVKATAGGLLGEAAKNENRAKVYYGLLKEPDIQVLPVPV
EDEEEVEETPDKPKKKKAKRDNIFMKKPKSDPNAPSIDRIPIPDLKENDKIEKGKALREA
SKRVQLGPETLPSICFYTLLNSGHTALCADICDDSTLLAVGFSNSTVKVWTLTTIKLRGM
KSIDKLQDIDKEAGDVLVRIMEEKDRDTCRTLHGHSGPVYRVGFDPFKTLLISCSEDATV
RLWSLQFWTCLVVYRGHVFSVWDVRWSPHGHYFVSSGNDRTARLWSTDQHQPIRIFAGHM
SDVDCVQFHPNSNYVATGSSDRTVRLWDCLTGSQVRLMTGHKKSIITLAFSVCGRWIASG
GDGGEILVWDISTGSPTAALPLYHSAPVTTLAFSRDGTILSSGSLDCTIKLWDFGLITDE
NTSEENTTNGSTATKEEKFLLRSFATKNSPLKNLHFTRRNLLLAVGSYEGSS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaaatctactccactacttgctgttcttcaacttctaaaaaagtataaccta
aagggcactgaagaaatattacggaaagaagccaacctcggtgatgcccaatttgaaaat
cttgatttgccagaagttgagcttgcaagcattctttcggcacatcataaagaaagtgac
ccacttacatatgaatctgcttatgaaagcctgaagaaatttgtggaaaactctttagat
gtttataagtttgaactatcaactttactgtacccagtttttgttcatatgtatctactc
ctcatactttatgatcacaatgatcatgcagaaaagttttttgagaaatttagtggagaa
caagaagattactatcaggaagacttgcaacgtttatccgttgttaaaactaaagatcat
atcaaagaaaatgaaattgctgagatttacagctgtaacaagtttgaggttctactgtca
agggatacatcttcacagcttaagagattcatacatgagcaaaagagttctccagttata
attaacatcatcaacaatcacattcagattgacatacatgacggaccaggcagaacacaa
gctcaagtaaaagctactgccggaggattattaggagaagctgcaaaaaatgaaaatcgt
gccaaagtatattatggtcttctcaaagaacctgatattcaagtactacctgttcctgtt
gaagatgaggaagaagttgaagagactccagataaaccgaagaagaaaaaggcaaagaga
gacaatatctttatgaaaaaaccaaaatcagaccctaatgctccttccattgaccggatt
ccaattccagatttaaaagaaaatgataaaattgaaaagggtaaggccttaagagaagct
tcaaagagagttcagttaggtccagagacattgccatctatttgtttctacacacttctc
aatagtggccacactgcactgtgtgcggacatttgtgatgactcaacattacttgctgtt
ggcttcagtaattctactgttaaggtttggacactgaccacaataaaacttcgtggtatg
aagtcaattgacaaactacaggatattgacaaagaagcaggcgatgtacttgtgaggata
atggaggaaaaagatagggacacttgccgaacattgcatggtcacagtggtccagtgtac
agagtgggatttgatccgtttaaaacacttctcatttcgtgttccgaagacgcaacagtg
cggctgtggtctctgcagttctggacatgcctggtggtgtaccgcgggcacgttttttcc
gtgtgggacgtgaggtggtctccgcacggccactacttcgtgtctagcggcaacgaccgc
acggccagactgtggtccacagatcaacatcagccgataagaattttcgcaggacatatg
tctgatgttgattgcgtacaatttcatccaaactctaattacgtagcgacgggctcgagt
gatcgtacggttcgtttatgggactgtctcacggggtcgcaagtgcgtcttatgactgga
cacaaaaaatcaataattacacttgctttttctgtatgtggaaggtggattgcgtctgga
ggtgacggtggtgagatacttgtctgggatatatccacaggctcaccgacagcagccctt
ccattgtatcactcggcacccgtgacaacattagcttttagtcgagatggaactatttta
tcatcaggatctttggattgcactattaaactatgggattttggtctcataacagatgaa
aatacaagtgaagaaaacactactaatggaagtacagctacaaaagaagaaaaattttta
ttacgatcttttgctaccaagaactcacccctcaaaaatttacattttacaaggcgtaac
cttctcctagctgtgggttcctatgaaggcagttcataa
DBGET
integrated database retrieval system
