Leptidea sinapis (Wood White): 126972785
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Entry
126972785 CDS
T09272
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
126972785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsin02000
]
126972785
Transporters [BR:
lsin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
126972785
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
126972785
NCBI-ProteinID:
XP_050675786
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Position
27:4931913..4977848
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AA seq
604 aa
AA seq
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MPPPASTSAPATATASATPDSPTSAASAHASVTQPLSNNVPKSRSMVVSLTPPRQRETWA
KKAEFLLAVVGFAVDLGNVWRFPYICYQNGGGAFLIPYCVMLLFGGLPLFFMELALGQYH
RCGCLTLWKRICPALKGVGYAICMIDIYMGMYYNTIIGWAVYYLVASLASINSVLPWTSC
DNEWNTPLCSPVTAPQTNPNASTPAKEFFERNVLEQHRSNGLEYMGPIKPSLALCVFGVF
VLVYFSLWKGVRSAGKVVWVTALAPYVVLLILLARGVTLPGATEGIRYYLTPEWHKLQNS
KVWIDAASQIFFSLGPGFGTLLALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVL
GYMAHVQNKSIEEVGLEGPGLVFIVYPEAIATMTGSVFWAIIFFLMLITLGLDSTFGGLE
AVTTALCDEYPRALGRHRELFVAGLLVFIYICALPTTTYGGVYLVDLLNVYGPGLAILFV
VFAEAAGVCWVYGVDRFSEDVRTMLGHAPGWFWRACWSYISPVFLLVLFVFSVLSHQEML
GGEYVYPEWSINVGWAMTGTTVSCIPLYIIYKLIITPGNLATRIRTIKRPEQTTIPPADA
LCSL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgcccgcgtccacgtccgctcccgcgaccgcgaccgcttccgctacaccggac
tcgccgacctcggctgcctccgcgcacgcctccgtaacacagccgctctccaacaacgtc
ccgaagagcaggtcaatggtggtatctctgacaccaccgcggcagcgggagacatgggca
aagaaggcggagttccttctggctgtggtggggttcgcggtagaccttggcaacgtgtgg
cgatttccctatatctgttaccagaacggaggcggtgcattcctgataccgtactgcgtg
atgctgttgttcggaggtctgccgctcttcttcatggagctcgcgctgggacaataccat
cgctgcggctgtctcacgctctggaagcggatctgtcctgctctcaaaggcgtcgggtac
gccatttgcatgatcgacatctacatgggcatgtactacaataccatcatcggctgggcg
gtgtactacctggtggcctcgctggcttccatcaactccgtgctcccctggaccagctgc
gacaacgagtggaacacgcctctctgctcgccggtcaccgcgccgcaaaccaaccctaac
gccagcacgcccgctaaggaattcttcgaacgaaacgttttggagcagcataggtctaac
ggactggagtacatgggaccgatcaagccttcgctggcactctgtgtcttcggagtgttt
gtgcttgtatacttctccttgtggaaaggtgtgcgaagtgctggcaaggtagtatgggtg
acggcgttggctccgtacgtggtgctgctcatccttctggcgaggggcgtgacgctgcct
ggagcgactgagggcatacgatactaccttacgccggaatggcacaaactgcagaattct
aaagtgtggatcgacgccgcctctcagattttcttctcactgggtcccgggttcggcacg
ctgctggcactctccagctacaacaagttcaacaacaactgctaccgtgatgccctcatc
acctcctccatcaactgtctcacaagctttctcgcgggattcgttatattttctgtacta
gggtatatggctcatgtccaaaacaagagcattgaagaagtgggactggaaggtccaggt
ttggtgttcatcgtttacccagaggccattgcaaccatgaccggctccgtgttctgggca
atcatcttctttctcatgcttatcacgctcggcctagacagtacttttggtggcctggag
gctgtgacgacggctttgtgcgacgaatacccgcgagcgctcggcaggcatcgggagctg
ttcgttgctggtctgctggtcttcatatatatctgtgctcttcccaccaccacatacggc
ggagtatatctggtggacctgctgaacgtgtacgggccagggctcgcgatactattcgtg
gtgtttgcggaggccgctggtgtatgctgggtttacggggtggaccgcttctccgaagac
gtgcgcacgatgcttggccacgcgcctggctggttctggcgagcttgctggtcttacatc
agtccagttttcctgctagtgctgttcgtcttctcggtactatcccaccaggagatgctc
ggcggggagtatgtgtacccggagtggtctatcaacgtcggctgggcaatgaccggcacc
acagtctcctgcataccgctatatattatatacaaactgatcatcacgcctggaaacctt
gcgactcgaatccgaacgatcaagcgtccggagcagacaaccatccctccagctgatgct
ctgtgctcgctgtga
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