KEGG   Leptidea sinapis (Wood White): 126972843
Entry
126972843         CDS       T09272                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
lsin  Leptidea sinapis (Wood White)
Pathway
lsin03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsin00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    126972843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsin03019]
    126972843
   03036 Chromosome and associated proteins [BR:lsin03036]
    126972843
Messenger RNA biogenesis [BR:lsin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     126972843
Chromosome and associated proteins [BR:lsin03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     126972843
    COMPASS/SET1 complex (yeast)
     126972843
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD_LRWD1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 126972843
NCBI-ProteinID: XP_050675895
LinkDB
Position
27:7973940..7975106
AA seq 316 aa
MMIKLVDQVIRSFKVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQMIT
VNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPV
EDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS
FDKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNN
KGIPIEASFSPDSQYIFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKYMLLA
SACTNMAFWLPTIDDV
NT seq 951 nt   +upstreamnt  +downstreamnt
atgatgattaagttggtagatcaagttatccgtagttttaaggtagcaaaagtttttcga
gaaaatactgacaagattaatagtatagacttctccccaagtggtgaaactcttatatca
tgtagcgaggatgaccaaattgtaatttatgactgtgaaaaggggacgcaaatgataaca
gtaaacagtaaaaaatatggtgttgacttaattcactttacacatgctaagaatacggct
attcatagttccacaaaagttgatgatactattaggtatttgtcactgcatgataataaa
tatatacgctattttccgggtcataccaaaaaagttgtaactctgtgtttgtctccagtt
gaagacacctttttatcaggatcgttggataaaacacttcgtttatgggatttacgctct
ccaaattgccaaggtttgatgcatttatcagggagacctgttgctgcttatgaccctgaa
ggcttaatttttgcagcaggggtaaattctgaaagcataaaactatatgatttaagatca
tttgacaagggaccgtttgttacatttaaactgaatcaagaaaaggaatgtgattggact
ggtcttaaattttccagggatggaaaaactatgcttattagtacaaatggatcaataata
agattagtagatgcatatcatggcactccattgcaaactttcactggacatctcaataac
aaaggcattcctatcgaagcatcttttagtccagattcacagtacatattcagtggctcg
acagatggaagagttcatgtgtggaatgctgatacaggatacaaagtttgtgttttgaat
ggtgaccatccagcacccatacaatgtgttcaattcaatccaaaatacatgttacttgca
tcagcttgtaccaatatggctttttggctgccaacaattgatgatgtttga

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