Leptidea sinapis (Wood White): 126973388
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Entry
126973388 CDS
T09272
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126973388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126973388
04121 Ubiquitin system [BR:
lsin04121
]
126973388
03036 Chromosome and associated proteins [BR:
lsin03036
]
126973388
03400 DNA repair and recombination proteins [BR:
lsin03400
]
126973388
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126973388
Ubiquitin system [BR:
lsin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126973388
Chromosome and associated proteins [BR:
lsin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
126973388
DNA repair and recombination proteins [BR:
lsin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
126973388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
BRCT
zf-RING_5
zf-RING_6
Stig1
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
126973388
NCBI-ProteinID:
XP_050676593
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All DBs
Position
29:complement(8670657..8672871)
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AA seq
516 aa
AA seq
DB search
MAKNLPQGDILKLLNALDAVRDDYTCGFCSKLCSKPVTLSTCLHIICSDHIEGLKNCPKC
KMPIIDNKIFEGDPELEASVQATQKLCDIFKRFRTEKTNIFEGEPHTGDSEKRKHDKKLK
GKVNIEKDTDLNVSALSSSSKTNKDIEKKNIKGETLLHVCSRNGKVDRVVELLRQGADPN
TKDNAGWTPLHEAVQNGHFDLVKVLLQYNTLVNVPGQCNETPLHEAVRYNHKDIATELVK
HGADLNARNCKGETPLQLAAQDMKVVLTDAAENLCHTQDSIIKHIASKYSELDFETIRLY
CCSKSRTVLSKLKMLYKSHSNLHIEAKLSKKITHLIVDTNDGVCVSSIEILQGIVNGIWI
LSSDWVIKSTESKLEKFEAYEVQGVGNKSYKGPRNARYNKYKQLPGIFNGCHFYFYNFTT
PYEVSKSLVITKDLLNKLVNESGGVVLRRVPNPESIPEMEALVPYHAKKGGKLEKCSHYI
IYKEMYEPMYNMAHIKALPIGWFIECLEKYELCEPW
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttgcctcaaggagatatccttaaattgcttaatgctttagatgcagtc
agggacgattatacatgtggattttgttcaaagttatgttcaaaacctgttacgttaagc
acttgtttacacataatttgttctgaccatatcgaaggtctgaagaactgccccaaatgt
aaaatgcccattattgataacaaaatcttcgaaggtgatccagaactggaagcatctgta
caggcaactcaaaaactttgcgacatattcaaaaggtttcgcactgaaaaaaccaacata
tttgaaggggagccgcatacgggtgacagtgaaaagagaaaacatgataaaaaacttaaa
ggaaaagtgaacattgagaaagatacagatctaaatgtatctgccctaagttcatcttcg
aaaacaaacaaagatatagagaagaaaaatattaaaggtgaaacattgctgcatgtttgt
agccgaaacggaaaagttgacagagttgtagagttattgcgccaaggggcggatcccaac
actaaagacaatgctggatggacaccactacatgaagcagtacagaatggccactttgac
cttgtgaaggtcttattacaatataatactcttgtaaatgtaccagggcaatgtaatgag
actccacttcatgaagcagtcagatataatcacaaagatattgcgacagagttagtaaaa
catggtgcagatttgaatgctagaaattgtaaaggcgaaactcctttacaattagctgct
caagacatgaaagtggttcttactgatgctgctgaaaacttatgccatacccaagactcc
atcataaaacatattgcaagtaaatattctgaattagactttgaaactattagattgtac
tgttgcagcaaatcacggacagttcttagcaaactgaaaatgttatataaatcccatagt
aatttacacattgaagcaaagttgagtaagaaaattactcatctgattgtagacacaaac
gatggcgtttgtgtctcaagcatagaaattttacagggaattgtcaacggcatatggatt
ctttcctcagattgggtgataaaatcaacagaatcaaaattagaaaaatttgaagcttat
gaagttcaaggtgttggtaacaagagttataaaggtcctagaaacgccaggtataataaa
tacaaacagttgccaggcatatttaatggctgtcatttttatttctacaatttcacaact
ccatatgaagtatctaaatcgttagtgataacaaaggatttattgaataaattagtaaat
gaaagtggtggtgtggtgttacggagagtgcctaatccagaatctatacctgaaatggaa
gccttagtgccataccatgctaaaaaggggggaaaactggaaaaatgctcccactatatt
atttataaagagatgtatgaacctatgtataatatggctcacattaaggccttgccaatt
ggttggtttattgaatgtctagagaaatatgaactatgtgagccatggtga
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