Leptidea sinapis (Wood White): 126973699
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Entry
126973699 CDS
T09272
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03013
Nucleocytoplasmic transport
lsin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126973699
03015 mRNA surveillance pathway
126973699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsin03019
]
126973699
Enzymes [BR:
lsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126973699
Messenger RNA biogenesis [BR:
lsin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126973699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
126973699
NCBI-ProteinID:
XP_050676984
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Position
30:complement(7808666..7810432)
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AA seq
462 aa
AA seq
DB search
MAQWGQKAEELEISNKVAGLGLNKKTSEKTEDDPDAANPAEASLLMKIIRQGLVESKLDI
EIQRKDPNSPLYSVKTFEALHLKPNLLKGVYALGFNAPSKIQETALPTLLADPPQNMIAQ
SQSGTGKTAAFVLAMLSRVDPAKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKYA
VRGEEVKKGSKITDHILIGTPGKMLDWGVKFNMFDLQKIKVFVLDEADVMIDRQGHQDQC
IRIHKCLPPTCQMMFFSATYDSAVMEFAEIIVPNPIIIRLLREEESLDNIKQYYVKCKSA
DDKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSRDGHSVAVLSGELTVEQRIAVLD
RFRGGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDLDKKADCETYLHRIGRTGRFGKAG
IAINLIDSPQAMNICLDIEAHFGKKIHLLDIEDAEEIEKIGA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtggggtcaaaaagcggaagaattagaaatttctaacaaagtcgctggctta
ggcttgaataagaaaacatctgaaaaaacagaagatgatcctgatgcagccaatccagcc
gaagcctcattactcatgaagattattcggcagggtcttgttgaatcaaaattggatatt
gaaatacagagaaaggatcccaattcacctctgtattcagttaaaacttttgaggcatta
cacttaaaaccaaatttgcttaaaggtgtttatgctttgggtttcaatgctccctcgaaa
atacaagaaactgcattacccacacttctagctgatccacctcaaaatatgatagctcaa
tcacagtcaggtacaggcaaaacagctgcttttgtactagctatgttgagtcgagttgat
cctgctaaaaattacccacaagtattgtgtcttagccctacttatgagcttgctatacaa
actggagaggttgcagcaaagatggcaaaattttgtccagaaattaaactgaagtatgca
gtaagaggtgaagaagttaaaaaaggatcaaagataacagaccatatattaattggaaca
cctgggaaaatgcttgactggggtgtaaagtttaatatgttcgatctacagaaaataaaa
gtatttgtgttggatgaagctgatgtcatgatagatagacagggacatcaagaccagtgt
attcgtattcataaatgcttacctccaacttgtcaaatgatgttcttctctgctacatat
gatagtgctgtgatggaatttgctgaaataattgttcccaatcctataataattagatta
ttaagagaagaggaatccttagataacattaaacaatactatgtcaaatgcaaaagtgct
gacgacaagtatagggctatctgtaatatatatggagtgataacaattggccaagctata
atattttgtcataccagaaaaactgctagttggctatcagaaaaaatgtcccgcgatggg
cattcagtagctgttctatctggtgagttaactgttgaacaaagaatagctgtgcttgat
agatttagagggggtcttgaaaaagtactcattactaccaatgttttatcccgaggcata
gatgttgaacaagttacattagttgttaactttgatatgcccatggatttagataaaaag
gcagattgtgaaacatacttgcataggattggacgtactggcaggttcgggaaagccggt
atagcaattaaccttattgattctcctcaggctatgaatatttgtttagatattgaagca
cactttggaaagaaaattcatttgttggatattgaagatgcagaagaaattgaaaaaatt
ggtgcataa
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